Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_00651_v3 Cicer arietinum L. HOM05D008677 ORTHO05D002434 3.6e-70 268.1 132 100.0
Medtr2g023010 Medicago truncatula HOM05D008677 ORTHO05D002434 8.7e-56 220.3 132 87.9
TPR.G9935 Trifolium pratense HOM05D008677 ORTHO05D002434 1.6e-54 216.1 132 82.6
Ca_00640_v3 Cicer arietinum L. HOM05D008677 ORTHO05D002434 4.8e-54 214.5 108 99.1
Psat1g181240 Pisum sativum HOM05D008677 ORTHO05D002434 1.6e-49 199.5 135 81.5
VMungo0540G1774 Vigna mungo HOM05D008677 ORTHO05D002434 2.3e-40 169.1 134 67.2
Glyma.15G107300 Glycine max HOM05D008677 ORTHO05D002434 1.1e-39 166.8 137 67.2
Lj6g0026915 Lotus japonicus HOM05D008677 ORTHO05D002434 1.7e-35 152.9 138 63.8
Phvul.006G150100 Phaseolus vulgaris HOM05D008677 ORTHO05D002434 6.5e-35 151.0 133 64.7
Lalb_Chr15g0087561 Lupinus albus HOM05D008677 ORTHO05D002434 1.3e-32 143.3 133 60.2
Glyma.17G014500 Glycine max HOM05D008677 ORTHO05D002434 1.1e-31 140.2 138 60.1
Glyma.07G259700 Glycine max HOM05D008677 ORTHO05D002434 1.3e-30 136.7 136 59.6
Glyma.07G259800 Glycine max HOM05D008677 ORTHO05D002434 2.8e-30 135.6 135 57.8
Glyma.17G014200 Glycine max HOM05D008677 ORTHO05D002434 4.8e-30 134.8 137 57.7
Glyma.17G014600 Glycine max HOM05D008677 ORTHO05D002434 8.2e-30 134.0 137 54.7
Lj4g0005888 Lotus japonicus HOM05D008677 ORTHO05D002434 8.2e-30 134.0 139 55.4
Lalb_Chr07g0177271 Lupinus albus HOM05D008677 ORTHO05D002434 1.8e-29 132.9 142 56.3
Glyma.17G014400 Glycine max HOM05D008677 ORTHO05D002434 2.4e-29 132.5 132 56.8
arahy.Tifrunner.gnm1.ann1.8P9XRD Arachis hypogaea HOM05D008677 ORTHO05D002434 1.7e-27 126.3 138 57.2
Lalb_Chr07g0177261 Lupinus albus HOM05D008677 ORTHO05D002434 1.1e-26 123.6 150 50.0
Lalb_Chr18g0056321 Lupinus albus HOM05D008677 ORTHO05D002434 2.5e-26 122.5 132 53.8
Glyma.17G014100 Glycine max HOM05D008677 ORTHO05D002434 3.6e-25 118.6 141 52.5
Ca_21088_v3 Cicer arietinum L. HOM05D008677 ORTHO05D002434 4.7e-25 118.2 164 51.2
Ca_30196_v3 Cicer arietinum L. HOM05D008677 ORTHO05D002434 4.7e-25 118.2 164 51.2
VMungo1215G2206 Vigna mungo HOM05D008677 ORTHO05D002434 7.9e-25 117.5 132 53.0
VMungo1215G0105 Vigna mungo HOM05D008677 ORTHO05D002434 3.0e-24 115.5 132 54.5
VMungo1215G0276 Vigna mungo HOM05D008677 ORTHO05D002434 3.0e-24 115.5 132 53.8
Glyma.13G205200 Glycine max HOM05D008677 ORTHO05D002434 2.6e-23 112.5 138 49.3
Medtr4g132000 Medicago truncatula HOM05D008677 ORTHO05D002434 9.7e-23 110.5 144 53.5
Medtr4g132010 Medicago truncatula HOM05D008677 ORTHO05D002434 2.8e-22 109.0 147 48.3
Psat4g006720 Pisum sativum HOM05D008677 ORTHO05D002434 3.7e-22 108.6 142 50.0
Psat4g006760 Pisum sativum HOM05D008677 ORTHO05D002434 6.3e-22 107.8 142 50.0
Glyma.07G259900 Glycine max HOM05D008677 ORTHO05D002434 1.1e-21 107.1 139 51.8
Phvul.003G078000 Phaseolus vulgaris HOM05D008677 ORTHO05D002434 6.9e-21 104.4 170 42.4
Phvul.003G077900 Phaseolus vulgaris HOM05D008677 ORTHO05D002434 2.6e-20 102.4 132 48.5
Psat4g006800 Pisum sativum HOM05D008677 ORTHO05D002434 1.0e-19 100.5 142 48.6
Psat4g006840 Pisum sativum HOM05D008677 ORTHO05D002434 1.0e-19 100.5 137 47.4
arahy.Tifrunner.gnm1.ann1.W7920A Arachis hypogaea HOM05D008677 ORTHO05D002434 5.0e-19 98.2 129 48.1
TPR.G37017 Trifolium pratense HOM05D008677 ORTHO05D002434 9.4e-18 94.0 150 44.7
Psat4g007000 Pisum sativum HOM05D008677 ORTHO05D002434 2.1e-17 92.8 146 43.2
arahy.Tifrunner.gnm1.ann1.PG586I Arachis hypogaea HOM05D008677 ORTHO05D002434 4.7e-17 91.7 151 45.0
TPR.G36987 Trifolium pratense HOM05D008677 ORTHO05D002434 4.7e-17 91.7 153 44.4
CiPaw.09G091000 Carya illinoinensis HOM05D003074 ORTHO05D002434 1.0e-16 90.5 147 42.2
Lj4g0000389 Lotus japonicus HOM05D008677 ORTHO05D002434 1.8e-16 89.7 121 43.8
MBI02_g07159_MAGBIO Magnolia biondii HOM05D003074 ORTHO05D002434 2.0e-15 86.3 129 43.4
Manes.16G007700 Manihot esculenta HOM05D003074 ORTHO05D002434 2.0e-15 86.3 137 41.6
TAR626G1667 Trochodendron aralioides HOM05D003074 ORTHO05D002434 2.6e-15 85.9 134 41.0
ClCG03G004770 Citrullus lanatus HOM05D003074 ORTHO05D002434 4.4e-15 85.1 130 43.1
Manes.17G038600 Manihot esculenta HOM05D003074 ORTHO05D002434 1.7e-14 83.2 138 40.6
Hma1.2p1_0673F.1_g201330 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 2.2e-14 82.8 137 40.1
Cfa000232 Carpinus fangiana HOM05D003074 ORTHO05D002434 2.8e-14 82.4 146 39.0
Thecc.06G219600 Theobroma cacao HOM05D003074 ORTHO05D002434 3.7e-14 82.0 139 42.4
Haze_06793 Corylus avellana HOM05D003074 ORTHO05D002434 4.8e-14 81.6 145 37.2
Sabra04G0008200 Salix brachista HOM05D003074 ORTHO05D002434 1.1e-13 80.5 135 40.0
Nn5g29371 Nelumbo nucifera HOM05D003074 ORTHO05D002434 1.4e-13 80.1 129 41.1
Sed0010919 Sechium edule HOM05D003074 ORTHO05D002434 1.4e-13 80.1 132 42.4
Hma1.2p1_1222F.1_g268140 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 1.8e-13 79.7 137 41.6
Potri.011G003100 Populus trichocarpa HOM05D003074 ORTHO05D002434 1.8e-13 79.7 138 40.6
MSTRG.6917 Avicennia marina HOM05D003074 ORTHO05D002434 3.1e-13 79.0 133 41.4
QL05p073377 Quercus lobata HOM05D003074 ORTHO05D002434 5.3e-13 78.2 137 40.1
MELO3C002460.2 Cucumis melo HOM05D003074 ORTHO05D002434 7.0e-13 77.8 131 40.5
Oeu042936.1 Olea europaea HOM05D003074 ORTHO05D002434 7.0e-13 77.8 129 38.8
TAR624G1270 Trochodendron aralioides HOM05D003074 ORTHO05D002434 7.0e-13 77.8 132 40.9
Migut.M01767 Erythranthe guttata HOM05D003074 ORTHO05D002434 9.1e-13 77.4 140 36.4
Dinv40751 Davidia involucrata HOM05D003074 ORTHO05D002434 2.0e-12 76.3 140 39.3
COL.COLO4_09658 Corchorus olitorius HOM05D003074 ORTHO05D002434 3.5e-12 75.5 146 38.4
DCAR_008152 Daucus carota HOM05D003074 ORTHO05D002434 4.5e-12 75.1 112 45.5
Psat4g006960 Pisum sativum HOM05D008677 ORTHO05D002434 5.9e-12 74.7 84 51.2
CANSAT56G1803 Cannabis sativa HOM05D003074 ORTHO05D002434 1.7e-11 73.2 153 39.2
Haze_09674 Corylus avellana HOM05D003074 ORTHO05D002434 1.7e-11 73.2 138 36.2
Duzib192G0001 Durio zibethinus HOM05D003074 ORTHO05D002434 1.7e-11 73.2 134 41.0
Gohir.A04G016900 Gossypium hirsutum HOM05D003074 ORTHO05D002434 1.7e-11 73.2 132 34.1
Potri.004G015900 Populus trichocarpa HOM05D003074 ORTHO05D002434 1.7e-11 73.2 138 38.4
CsaV3_1G010810 Cucumis sativus L. HOM05D003074 ORTHO05D002434 2.2e-11 72.8 122 40.2
FvH4_3g22640 Fragaria vesca HOM05D003074 ORTHO05D002434 2.2e-11 72.8 146 34.9
Gohir.D05G369300 Gossypium hirsutum HOM05D003074 ORTHO05D002434 2.2e-11 72.8 132 34.1
Gorai.009G438000 Gossypium raimondii HOM05D003074 ORTHO05D002434 2.2e-11 72.8 132 34.1
Manes.03G129100 Manihot esculenta HOM05D003074 ORTHO05D002434 2.2e-11 72.8 136 37.5
CiPaw.12G129500 Carya illinoinensis HOM05D003074 ORTHO05D002434 3.8e-11 72.0 144 37.5
Dinv22264 Davidia involucrata HOM05D003074 ORTHO05D002434 3.8e-11 72.0 131 39.7
FAN11G2929 Fragaria x ananassa HOM05D003074 ORTHO05D002434 3.8e-11 72.0 146 34.9
FAN16G0504 Fragaria x ananassa HOM05D003074 ORTHO05D002434 3.8e-11 72.0 146 34.9
FAN25G2410 Fragaria x ananassa HOM05D003074 ORTHO05D002434 3.8e-11 72.0 146 34.9
QL08p010341 Quercus lobata HOM05D003074 ORTHO05D002434 3.8e-11 72.0 138 36.2
Thecc.07G037400 Theobroma cacao HOM05D003074 ORTHO05D002434 5.0e-11 71.6 139 35.3
CiPaw.10G070500 Carya illinoinensis HOM05D003074 ORTHO05D002434 6.5e-11 71.2 142 38.7
Ciclev10009680m.g Citrus clementina HOM05D003074 ORTHO05D002434 6.5e-11 71.2 135 36.3
Oeu007582.1 Olea europaea HOM05D003074 ORTHO05D002434 6.5e-11 71.2 129 37.2
PGR004G0474 Punica granatum HOM05D003074 ORTHO05D002434 1.5e-10 70.1 148 37.2
Eucgr.E04063 Eucalyptus grandis HOM05D003074 ORTHO05D002434 1.9e-10 69.7 134 36.6
Duzib235G0239 Durio zibethinus HOM05D003074 ORTHO05D002434 3.2e-10 68.9 133 39.1
PSO541G1700 Papaver somniferum HOM05D003074 ORTHO05D002434 3.2e-10 68.9 138 34.8
PSO675G3145 Papaver somniferum HOM05D003074 ORTHO05D002434 3.2e-10 68.9 138 35.5
Gohir.D10G012900 Gossypium hirsutum HOM05D003074 ORTHO05D002434 4.2e-10 68.6 132 40.2
Gorai.011G014600 Gossypium raimondii HOM05D003074 ORTHO05D002434 4.2e-10 68.6 132 40.2
CSS0019776 Camellia sinensis var. sinensis HOM05D003074 ORTHO05D002434 5.5e-10 68.2 131 37.4
Duzib213G0915 Durio zibethinus HOM05D003074 ORTHO05D002434 7.2e-10 67.8 134 34.3
FAN21G2959 Fragaria x ananassa HOM05D003074 ORTHO05D002434 7.2e-10 67.8 147 34.0
Prupe.4G212400 Prunus persica HOM05D003074 ORTHO05D002434 7.2e-10 67.8 139 35.3
Atru.chr2.3400 Acer truncatum HOM05D003074 ORTHO05D002434 9.4e-10 67.4 155 36.8
Aqoxy1G02174 Aquilegia oxysepala HOM05D003074 ORTHO05D002434 1.2e-09 67.0 137 37.2
Cc05_g13710 Coffea canephora HOM05D003074 ORTHO05D002434 1.2e-09 67.0 145 33.8
Eucgr.E04060 Eucalyptus grandis HOM05D003074 ORTHO05D002434 1.2e-09 67.0 135 34.8
Eucgr.E04066 Eucalyptus grandis HOM05D003074 ORTHO05D002434 1.2e-09 67.0 133 36.1
Gohir.A10G013000 Gossypium hirsutum HOM05D003074 ORTHO05D002434 1.2e-09 67.0 132 39.4
Eucgr.E04061 Eucalyptus grandis HOM05D003074 ORTHO05D002434 1.6e-09 66.6 134 37.3
Manes.15G072100 Manihot esculenta HOM05D003074 ORTHO05D002434 1.6e-09 66.6 130 37.7
PGSC0003DMG400001089 Solanum tuberosum HOM05D003074 ORTHO05D002434 1.6e-09 66.6 137 34.3
Cc09_g09730 Coffea canephora HOM05D003074 ORTHO05D002434 2.7e-09 65.9 141 36.2
Cfa020350 Carpinus fangiana HOM05D003074 ORTHO05D002434 3.6e-09 65.5 132 36.4
Hma1.2p1_1091F.1_g255850 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 3.6e-09 65.5 127 39.4
MD05G1345200 Malus domestica HOM05D003074 ORTHO05D002434 3.6e-09 65.5 155 35.5
MD10G1320500 Malus domestica HOM05D003074 ORTHO05D002434 3.6e-09 65.5 150 34.0
Nn1g03544 Nelumbo nucifera HOM05D003074 ORTHO05D002434 3.6e-09 65.5 129 35.7
Gorai.002G088300 Gossypium raimondii HOM05D003074 ORTHO05D002434 4.7e-09 65.1 132 37.9
TWI38G1232 Tripterygium wilfordii HOM05D003074 ORTHO05D002434 4.7e-09 65.1 138 34.8
Cc09_g01730 Coffea canephora HOM05D003074 ORTHO05D002434 6.1e-09 64.7 137 32.8
Duzib268G1655 Durio zibethinus HOM05D003074 ORTHO05D002434 6.1e-09 64.7 137 34.3
Eucgr.E04065 Eucalyptus grandis HOM05D003074 ORTHO05D002434 8.0e-09 64.3 136 35.3
Thhalv10021814m.g Eutrema salsugineum HOM05D003074 ORTHO05D002434 8.0e-09 64.3 130 32.3
Atru.chr10.2213 Acer truncatum HOM05D003074 ORTHO05D002434 1.0e-08 63.9 72 48.6
AUR62012700 Chenopodium quinoa HOM05D003074 ORTHO05D002434 1.0e-08 63.9 141 37.6
Atru.chr2.3399 Acer truncatum HOM05D003074 ORTHO05D002434 1.4e-08 63.5 149 33.6
Hma1.2p1_1162F.1_g262580 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 1.4e-08 63.5 127 37.0
Sed0007461 Sechium edule HOM05D003074 ORTHO05D002434 1.4e-08 63.5 135 34.8
TWI38G1886 Tripterygium wilfordii HOM05D003074 ORTHO05D002434 1.4e-08 63.5 143 37.1
Sc17g0007340 Simmondsia chinensis HOM05D003074 ORTHO05D002434 1.8e-08 63.2 134 33.6
Actinidia35342 Actinidia chinensis HOM05D003074 ORTHO05D002434 2.3e-08 62.8 121 38.0
Cpa.g.sc97.7 Carica papaya HOM05D003074 ORTHO05D002434 2.3e-08 62.8 130 33.8
Eucgr.E04062 Eucalyptus grandis HOM05D003074 ORTHO05D002434 2.3e-08 62.8 135 33.3
RhsimUnG0250800 Rhododendron simsii HOM05D003074 ORTHO05D002434 2.3e-08 62.8 122 35.2
THA.LOC104817856 Tarenaya hassleriana HOM05D003074 ORTHO05D002434 2.3e-08 62.8 133 35.3
Eucgr.E04064 Eucalyptus grandis HOM05D003074 ORTHO05D002434 3.0e-08 62.4 136 36.0
Lsat_1_v5_gn_9_93960 Lactuca sativa HOM05D003074 ORTHO05D002434 3.0e-08 62.4 130 36.2
Peaxi162Scf01097g00039 Petunia axillaris HOM05D003074 ORTHO05D002434 3.0e-08 62.4 132 34.1
ATR0752G060 Amborella trichopoda HOM05D003074 ORTHO05D002434 5.2e-08 61.6 131 35.1
Gohir.A01G079300 Gossypium hirsutum HOM05D003074 ORTHO05D002434 5.2e-08 61.6 132 37.1
MBI18_g22612_MAGBIO Magnolia biondii HOM05D003074 ORTHO05D002434 5.2e-08 61.6 130 34.6
CiPaw.11G189000 Carya illinoinensis HOM05D003074 ORTHO05D002434 1.2e-07 60.5 150 31.3
Eucgr.D01318 Eucalyptus grandis HOM05D003074 ORTHO05D002434 1.2e-07 60.5 134 35.8
MD11G1218800 Malus domestica HOM05D003074 ORTHO05D002434 1.2e-07 60.5 134 32.8
CDE05G3459 Ceratophyllum demersum HOM05D003074 ORTHO05D002434 1.5e-07 60.1 132 31.8
EL10Ac4g07810 Beta vulgaris HOM05D003074 ORTHO05D002434 2.0e-07 59.7 130 33.1
Duzib160G0150 Durio zibethinus HOM05D003074 ORTHO05D002434 2.0e-07 59.7 130 37.7
vmacro03644 Vaccinium macrocarpon HOM05D003074 ORTHO05D002434 2.6e-07 59.3 134 34.3
Ah.04g165880 Amaranthus hybridus HOM05D003074 ORTHO05D002434 3.3e-07 58.9 134 32.8
BcaB06g26099 Brassica carinata HOM05D010457 ORTHO05D002434 3.3e-07 58.9 132 30.3
Sed0026688 Sechium edule HOM05D003074 ORTHO05D002434 3.3e-07 58.9 134 34.3
Migut.H01829 Erythranthe guttata HOM05D003074 ORTHO05D002434 7.5e-07 57.8 139 36.0
CARHR095990 Cardamine hirsuta HOM05D003074 ORTHO05D002434 9.7e-07 57.4 135 31.9
Gohir.D01G066350 Gossypium hirsutum HOM05D003074 ORTHO05D002434 9.7e-07 57.4 116 37.1
RcHm_v2.0_Chr5g0039411 Rosa chinensis HOM05D003074 ORTHO05D002434 9.7e-07 57.4 144 29.2
BraA05t21736Z Brassica rapa HOM05D010457 ORTHO05D002434 1.3e-06 57.0 138 31.2
THA.LOC104812967 Tarenaya hassleriana HOM05D003074 ORTHO05D002434 1.3e-06 57.0 139 30.9
TAR624G0488 Trochodendron aralioides HOM05D003074 ORTHO05D002434 1.3e-06 57.0 121 36.4
ClCG05G014310 Citrullus lanatus HOM05D003074 ORTHO05D002434 1.7e-06 56.6 133 30.8
DCAR_004216 Daucus carota HOM05D003074 ORTHO05D002434 2.2e-06 56.2 121 36.4
RcHm_v2.0_Chr5g0003291 Rosa chinensis HOM05D003074 ORTHO05D002434 2.2e-06 56.2 136 30.9
A05p28590 Brassica napus HOM05D010457 ORTHO05D002434 2.8e-06 55.8 133 30.1
PGR031G1144 Punica granatum HOM05D003074 ORTHO05D002434 2.8e-06 55.8 132 30.3
Sc03g0008600 Simmondsia chinensis HOM05D003074 ORTHO05D002434 2.8e-06 55.8 131 30.5
Sopen02g011120 Solanum pennellii HOM05D003074 ORTHO05D002434 2.8e-06 55.8 87 41.4
PGSC0003DMG400019879 Solanum tuberosum HOM05D003074 ORTHO05D002434 2.8e-06 55.8 87 41.4
Prupe.4G021600 Prunus persica HOM05D003074 ORTHO05D002434 3.7e-06 55.5 160 31.2
EL10Ac4g07811 Beta vulgaris HOM05D003074 ORTHO05D002434 4.8e-06 55.1 131 32.1
PGR042G1468 Punica granatum HOM05D003074 ORTHO05D002434 4.8e-06 55.1 133 31.6
PGSC0003DMG400029820 Solanum tuberosum HOM05D003074 ORTHO05D002434 4.8e-06 55.1 95 36.8
Aqoxy1G02176 Aquilegia oxysepala HOM05D003074 ORTHO05D002434 6.3e-06 54.7 136 33.1
FAN26G1625 Fragaria x ananassa HOM05D003074 ORTHO05D002434 6.3e-06 54.7 137 32.8
Lsat_1_v5_gn_5_6000 Lactuca sativa HOM05D003074 ORTHO05D002434 6.3e-06 54.7 133 30.8


User provided reference genes

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