Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_00644_v3 Cicer arietinum L. HOM05D007677 ORTHO05D009728 9.5e-89 330.1 161 100.0
Medtr2g022190 Medicago truncatula HOM05D007677 ORTHO05D009728 1.6e-72 276.2 161 83.2
TPR.G30685 Trifolium pratense HOM05D007677 ORTHO05D009728 3.1e-71 271.9 158 81.6
Glyma.15G104100 Glycine max HOM05D007677 ORTHO05D009728 1.2e-70 270.0 161 79.5
Phvul.006G153800 Phaseolus vulgaris HOM05D007677 ORTHO05D009728 5.8e-70 267.7 161 80.1
Glyma.13G208700 Glycine max HOM05D007677 ORTHO05D009728 7.6e-70 267.3 161 80.1
Psat1g183560 Pisum sativum HOM05D007677 ORTHO05D009728 2.9e-69 265.4 161 82.0
VMungo0540G0472 Vigna mungo HOM05D007677 ORTHO05D009728 6.4e-69 264.2 161 80.1
arahy.Tifrunner.gnm1.ann1.UI8DPT Arachis hypogaea HOM05D007677 ORTHO05D009728 9.2e-68 260.4 161 79.5
arahy.Tifrunner.gnm1.ann1.PDVV0K Arachis hypogaea HOM05D007677 ORTHO05D009728 5.1e-66 254.6 161 78.3
Lalb_Chr18g0056081 Lupinus albus HOM05D007677 ORTHO05D009728 5.1e-66 254.6 162 79.6
Lj6g0003442 Lotus japonicus HOM05D007677 ORTHO05D009728 2.1e-64 249.2 152 80.9
CiPaw.01G160100 Carya illinoinensis HOM05D007677 ORTHO05D009728 1.3e-61 240.0 156 72.4
Thecc.04G221700 Theobroma cacao HOM05D007677 ORTHO05D009728 4.9e-61 238.0 161 72.0
Lj4g0019321 Lotus japonicus HOM05D007677 ORTHO05D009728 1.9e-60 236.1 163 73.0
Ciclev10006064m.g Citrus clementina HOM05D007677 ORTHO05D009728 3.2e-60 235.3 160 69.4
Duzib212G0325 Durio zibethinus HOM05D001530 ORTHO05D003676 4.2e-60 235.0 158 71.5
QL06p004212 Quercus lobata HOM05D007677 ORTHO05D009728 5.4e-60 234.6 150 73.3
VMungo1215G2604 Vigna mungo HOM05D007677 ORTHO05D009728 5.4e-60 234.6 153 74.5
Phvul.003G092600 Phaseolus vulgaris HOM05D007677 ORTHO05D009728 7.1e-60 234.2 152 74.3
COL.COLO4_21648 Corchorus olitorius HOM05D007677 ORTHO05D009728 1.6e-59 233.0 152 73.7
Glyma.17G017000 Glycine max HOM05D007677 ORTHO05D009728 1.6e-59 233.0 152 75.0
Manes.03G184600 Manihot esculenta HOM05D007677 ORTHO05D009728 1.7e-58 229.6 150 74.7
FvH4_4g14500 Fragaria vesca HOM05D007677 ORTHO05D009728 5.1e-58 228.0 159 69.8
FAN12G4178 Fragaria x ananassa HOM05D007677 ORTHO05D009728 5.1e-58 228.0 159 69.8
FAN07G0089 Fragaria x ananassa HOM05D007677 ORTHO05D009728 6.6e-58 227.6 159 69.2
TWI09G0567 Tripterygium wilfordii HOM05D007677 ORTHO05D009728 6.6e-58 227.6 160 68.8
CiPaw.02G092500 Carya illinoinensis HOM05D007677 ORTHO05D009728 1.1e-57 226.9 149 72.5
RcHm_v2.0_Chr4g0418331 Rosa chinensis HOM05D007677 ORTHO05D009728 1.6e-56 223.0 159 68.6
Gohir.A02G031000 Gossypium hirsutum HOM05D007677 ORTHO05D009728 4.8e-56 221.5 159 69.2
MD13G1183200 Malus domestica HOM05D007677 ORTHO05D009728 4.8e-56 221.5 161 67.7
Prupe.1G151500 Prunus persica HOM05D007677 ORTHO05D009728 1.1e-55 220.3 160 68.8
MD16G1184100 Malus domestica HOM05D007677 ORTHO05D009728 1.4e-55 219.9 161 67.7
Medtr4g117270 Medicago truncatula HOM05D007677 ORTHO05D009728 1.8e-55 219.5 159 68.6
CANSAT78G2143 Cannabis sativa HOM05D007677 ORTHO05D009728 2.4e-55 219.2 166 66.9
DCAR_030598 Daucus carota HOM05D007677 ORTHO05D009728 3.1e-55 218.8 150 68.7
Gohir.D02G037900 Gossypium hirsutum HOM05D007677 ORTHO05D009728 4.0e-55 218.4 159 68.6
Gorai.005G041800 Gossypium raimondii HOM05D007677 ORTHO05D009728 4.0e-55 218.4 159 68.6
CSS0026660 Camellia sinensis var. sinensis HOM05D007677 ORTHO05D009728 5.3e-55 218.0 150 71.3
Eucgr.H03598 Eucalyptus grandis HOM05D007677 ORTHO05D009728 5.3e-55 218.0 151 72.2
Glyma.07G257100 Glycine max HOM05D007677 ORTHO05D009728 3.4e-54 215.3 152 71.1
Ca_21594_v3 Cicer arietinum L. HOM05D007677 ORTHO05D009728 4.5e-54 214.9 151 67.5
CsaV3_3G013730 Cucumis sativus L. HOM05D007677 ORTHO05D009728 4.5e-54 214.9 149 70.5
ClCG05G005440 Citrullus lanatus HOM05D007677 ORTHO05D009728 5.8e-54 214.5 148 70.3
MELO3C006567.2 Cucumis melo HOM05D007677 ORTHO05D009728 5.8e-54 214.5 149 69.8
Cfa015583 Carpinus fangiana HOM05D007677 ORTHO05D009728 1.3e-53 213.4 155 67.7
Sabra10G0011000 Salix brachista HOM05D001530 ORTHO05D004168 4.9e-53 211.5 162 65.4
Nn1g02165 Nelumbo nucifera HOM05D007677 ORTHO05D009728 8.4e-53 210.7 149 67.1
Oeu037682.1 Olea europaea HOM05D007677 ORTHO05D009728 8.4e-53 210.7 151 69.5
SGA_v2.0_scaffold237G43825 Striga asiatica HOM05D007677 ORTHO05D009728 8.4e-53 210.7 156 65.4
Haze_00962 Corylus avellana HOM05D007677 ORTHO05D009728 1.1e-52 210.3 149 69.1
Psat4g031560 Pisum sativum HOM05D007677 ORTHO05D009728 1.1e-52 210.3 154 67.5
Cc03_g03130 Coffea canephora HOM05D007677 ORTHO05D009728 2.4e-52 209.1 150 67.3
TPR.G20115 Trifolium pratense HOM05D007677 ORTHO05D009728 4.2e-52 208.4 156 66.0
Sed0011127 Sechium edule HOM05D007677 ORTHO05D009728 1.6e-51 206.5 149 67.8
PGR004G0596 Punica granatum HOM05D007677 ORTHO05D009728 3.5e-51 205.3 147 69.4
Aqoxy2G03269 Aquilegia oxysepala HOM05D007677 ORTHO05D009728 1.0e-50 203.8 154 63.6
Peaxi162Scf00196g00106 Petunia axillaris HOM05D007677 ORTHO05D009728 1.3e-50 203.4 150 68.0
PGSC0003DMG400033121 Solanum tuberosum HOM05D007677 ORTHO05D009728 3.0e-50 202.2 147 67.3
Solyc01g080100.3 Solanum lycopersicum HOM05D007677 ORTHO05D009728 5.1e-50 201.4 147 68.7
Sopen01g031880 Solanum pennellii HOM05D007677 ORTHO05D009728 8.7e-50 200.7 147 68.7
PSO407G0046 Papaver somniferum HOM05D007677 ORTHO05D009728 1.6e-48 196.4 140 69.3
PSO170G6325 Papaver somniferum HOM05D007677 ORTHO05D009728 3.7e-48 195.3 140 68.6
Migut.G00291 Erythranthe guttata HOM05D007677 ORTHO05D009728 1.1e-47 193.7 145 64.1
TAR633G1088 Trochodendron aralioides HOM05D007677 ORTHO05D009728 3.1e-47 192.2 164 59.8
Lj6P565T22 Lonicera japonica HOM05D007677 ORTHO05D009728 5.3e-47 191.4 149 63.1
vmacro08279 Vaccinium macrocarpon HOM05D007677 ORTHO05D009728 5.3e-47 191.4 164 60.4
CSS0045125 Camellia sinensis var. sinensis HOM05D007677 ORTHO05D009728 1.2e-46 190.3 159 62.3
CSS0000052 Camellia sinensis var. sinensis HOM05D007677 ORTHO05D009728 1.1e-44 183.7 149 63.8
Nitab4.5_0001247g0090 Nicotiana tabacum HOM05D007677 ORTHO05D009728 9.3e-44 180.6 150 62.7
AUR62030087 Chenopodium quinoa HOM05D007677 ORTHO05D007693 1.2e-43 180.3 132 66.7
Sc13g0003990 Simmondsia chinensis HOM05D007677 ORTHO05D009728 1.2e-43 180.3 149 59.7
Dinv38394 Davidia involucrata HOM05D007677 ORTHO05D009728 1.9e-41 172.9 133 65.4
THA.LOC104820106 Tarenaya hassleriana HOM05D001407 ORTHO05D001314 4.0e-39 165.2 151 57.6
Thhalv10021653m.g Eutrema salsugineum HOM05D007677 ORTHO05D009728 3.8e-37 158.7 162 51.2
AL3G17000 Arabidopsis lyrata HOM05D007677 ORTHO05D009728 4.9e-37 158.3 162 51.2
BcaC05g30051 Brassica carinata HOM05D007677 ORTHO05D009728 6.5e-37 157.9 162 50.0
A05p41840 Brassica napus HOM05D007677 ORTHO05D009728 1.4e-36 156.8 162 49.4
BraA05t22903Z Brassica rapa HOM05D007677 ORTHO05D009728 1.4e-36 156.8 162 49.4
Carub.0003s0558 Capsella rubella HOM05D007677 ORTHO05D009728 1.9e-36 156.4 162 50.0
C05p61090 Brassica napus HOM05D007677 ORTHO05D009728 2.5e-36 156.0 162 50.6
BolC5t34766H Brassica oleracea HOM05D007677 ORTHO05D009728 2.5e-36 156.0 162 50.6
Sp3g05100 Schrenkiella parvula HOM05D007677 ORTHO05D009728 2.5e-36 156.0 161 50.3
AT3G06145 Arabidopsis thaliana HOM05D007677 ORTHO05D009728 5.5e-36 154.8 160 50.0
BcaNung06667 Brassica carinata HOM05D007677 ORTHO05D009728 5.5e-36 154.8 162 50.0
CARHR080660 Cardamine hirsuta HOM05D007677 ORTHO05D009728 3.5e-35 152.1 162 50.0
Aa31LG5G16660 Aethionema arabicum HOM05D007677 ORTHO05D009728 1.8e-34 149.8 153 52.3
TAR362G0152 Trochodendron aralioides HOM05D007677 ORTHO05D009728 2.3e-34 149.4 112 63.4
ATR0626G325 Amborella trichopoda HOM05D007677 ORTHO05D009728 2.8e-32 142.5 134 52.2
SHI00378 Sapria himalayana HOM05D007677 ORTHO05D009728 8.5e-29 131.0 154 46.8
SEGI_19260 Sequoiadendron giganteum HOM05D007677 ORTHO05D009728 2.5e-28 129.4 128 51.6
Potri.010G030701 Populus trichocarpa HOM05D007677 ORTHO05D009728 1.8e-23 113.2 93 62.4
Lsat_1_v5_gn_7_41320 Lactuca sativa HOM05D007677 ORTHO05D009728 1.5e-22 110.2 72 70.8
Atru.chr4.2568 Acer truncatum HOM05D007677 ORTHO05D009728 6.5e-21 104.8 68 75.0
EL10Ac3g06358 Beta vulgaris HOM05D007677 ORTHO05D009728 3.2e-20 102.4 71 71.8
MBI17_g34455_MAGBIO Magnolia biondii HOM05D002055 ORTHO05D002120 1.5e-17 93.6 62 67.7
SEGI_22306 Sequoiadendron giganteum HOM05D007677 ORTHO05D009728 2.0e-14 83.2 113 37.2
SEGI_22697 Sequoiadendron giganteum HOM05D007677 ORTHO05D009728 1.7e-13 80.1 113 37.2


User provided reference genes

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