Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_00577_v3 Cicer arietinum L. HOM05D007369 ORTHO05D009369 1.9e-179 632.5 342 100.0
TPR.G37368 Trifolium pratense HOM05D007369 ORTHO05D009369 1.5e-123 446.8 326 73.3
Medtr8g093650 Medicago truncatula HOM05D007369 ORTHO05D009369 1.2e-120 437.2 376 63.0
Glyma.13G214800 Glycine max HOM05D007369 ORTHO05D009369 1.0e-108 397.5 338 65.4
Psat1g187040 Pisum sativum HOM05D007369 ORTHO05D009369 3.9e-108 395.6 405 57.3
Phvul.006G161000 Phaseolus vulgaris HOM05D007369 ORTHO05D009369 2.0e-104 383.3 336 62.8
Ca_17638_v3 Cicer arietinum L. HOM05D007369 ORTHO05D009369 5.8e-104 381.7 399 56.1
VMungo0540G1702 Vigna mungo HOM05D007369 ORTHO05D009369 2.7e-101 372.9 343 61.5
Glyma.15G098300 Glycine max HOM05D007369 ORTHO05D009369 2.5e-99 366.3 330 62.1
Lalb_Chr18g0055751 Lupinus albus HOM05D007369 ORTHO05D009369 6.5e-95 351.7 340 58.5
arahy.Tifrunner.gnm1.ann1.ED76E0 Arachis hypogaea HOM05D007369 ORTHO05D009369 5.7e-83 312.0 317 58.0
arahy.Tifrunner.gnm1.ann1.IR05CW Arachis hypogaea HOM05D007369 ORTHO05D009369 5.9e-80 302.0 332 54.8
LjContig00389g0017607 Lotus japonicus HOM05D007369 ORTHO05D009369 3.7e-74 282.7 267 59.9
Thecc.04G277200 Theobroma cacao HOM05D007369 ORTHO05D009369 6.3e-66 255.4 353 44.8
Dinv38329 Davidia involucrata HOM05D007369 ORTHO05D009369 2.4e-65 253.4 348 43.1
Gohir.D09G060700 Gossypium hirsutum HOM05D007369 ORTHO05D009369 5.3e-65 252.3 350 45.1
Gohir.A09G061800 Gossypium hirsutum HOM05D007369 ORTHO05D009369 1.6e-64 250.8 344 44.5
QL06p007318 Quercus lobata HOM05D007369 ORTHO05D009369 1.3e-63 247.7 352 46.0
Cfa015498 Carpinus fangiana HOM05D007369 ORTHO05D009369 1.5e-62 244.2 347 43.5
Duzib052G0382 Durio zibethinus HOM05D007369 ORTHO05D009369 1.5e-62 244.2 343 44.9
Gorai.006G075300 Gossypium raimondii HOM05D007369 ORTHO05D009369 3.6e-61 239.6 350 44.3
Manes.03G190800 Manihot esculenta HOM05D007369 ORTHO05D009369 8.0e-61 238.4 347 43.2
Ciclev10005057m.g Citrus clementina HOM05D007369 ORTHO05D009369 3.7e-58 229.6 346 43.9
GSVIVG01017812001 Vitis vinifera HOM05D007369 ORTHO05D009369 1.4e-57 227.6 336 42.9
CiPaw.02G086900 Carya illinoinensis HOM05D007369 ORTHO05D009369 1.8e-57 227.3 339 41.6
CSS0015973 Camellia sinensis var. sinensis HOM05D007369 ORTHO05D009369 1.2e-56 224.6 344 41.6
Manes.15G017400 Manihot esculenta HOM05D007369 ORTHO05D009369 8.6e-55 218.4 345 41.2
MD13G1174200 Malus domestica HOM05D007369 ORTHO05D009369 1.5e-54 217.6 346 41.6
Prupe.1G142600 Prunus persica HOM05D007369 ORTHO05D009369 1.2e-53 214.5 351 39.3
Potri.008G195300 Populus trichocarpa HOM05D007369 ORTHO05D009369 5.2e-52 209.1 345 40.3
Duzib151G0340 Durio zibethinus HOM05D007369 ORTHO05D009369 3.4e-51 206.5 350 39.7
Nn3g21294 Nelumbo nucifera HOM05D007369 ORTHO05D009369 4.4e-51 206.1 340 40.0
COL.COLO4_13933 Corchorus olitorius HOM05D007369 ORTHO05D009369 9.8e-51 204.9 424 34.4
TAR636G2558 Trochodendron aralioides HOM05D007369 ORTHO05D009369 3.7e-50 203.0 357 39.5
RcHm_v2.0_Chr4g0420931 Rosa chinensis HOM05D007369 ORTHO05D009369 4.1e-49 199.5 330 39.4
Hma1.2p1_0078F.1_g040800 Hydrangea macrophylla HOM05D007369 ORTHO05D009369 2.0e-48 197.2 338 38.8
Rhsim04G0215900 Rhododendron simsii HOM05D007369 ORTHO05D009369 4.5e-48 196.1 301 41.2
Haze_01056 Corylus avellana HOM05D007369 ORTHO05D009369 2.3e-47 193.7 399 36.3
Actinidia23432 Actinidia chinensis HOM05D007369 ORTHO05D009369 2.5e-46 190.3 341 45.2
FvH4_4g17160 Fragaria vesca HOM05D007369 ORTHO05D009369 6.1e-45 185.7 340 36.5
FAN12G1425 Fragaria x ananassa HOM05D007369 ORTHO05D009369 6.1e-45 185.7 340 36.5
Eucgr.B01264 Eucalyptus grandis HOM05D007369 ORTHO05D009369 6.8e-44 182.2 338 37.9
FAN17G0929 Fragaria x ananassa HOM05D007369 ORTHO05D009369 6.8e-44 182.2 340 35.6
FAN12G3176 Fragaria x ananassa HOM05D007369 ORTHO05D009369 8.9e-44 181.8 340 36.2
Oeu062882.1 Olea europaea HOM05D007369 ORTHO05D009369 7.5e-43 178.7 345 34.5
Actinidia40222 Actinidia chinensis HOM05D007369 ORTHO05D009369 1.3e-42 177.9 324 38.3
DCAR_002440 Daucus carota HOM05D007369 ORTHO05D009369 2.2e-42 177.2 308 37.0
FAN07G2486 Fragaria x ananassa HOM05D007369 ORTHO05D009369 2.9e-42 176.8 340 36.2
Oeu044796.2 Olea europaea HOM05D007369 ORTHO05D009369 6.4e-42 175.6 350 33.7
Sed0026345 Sechium edule HOM05D007369 ORTHO05D009369 2.4e-41 173.7 340 35.9
Potri.010G031250 Populus trichocarpa HOM05D007369 ORTHO05D009369 5.4e-41 172.6 213 47.9
Solyc01g067700.3 Solanum lycopersicum HOM05D007369 ORTHO05D009369 1.6e-40 171.0 321 34.6
CANSAT78G0356 Cannabis sativa HOM05D007369 ORTHO05D009369 2.0e-40 170.6 352 36.4
CsaV3_3G014100 Cucumis sativus L. HOM05D007369 ORTHO05D009369 3.5e-40 169.9 343 35.0
Nitab4.5_0003067g0040 Nicotiana tabacum HOM05D007369 ORTHO05D009369 7.8e-40 168.7 315 37.1
Cc03_g02400 Coffea canephora HOM05D007369 ORTHO05D009369 3.0e-39 166.8 299 38.1
ATR0706G035 Amborella trichopoda HOM05D007369 ORTHO05D009369 1.1e-38 164.9 353 36.3
Sopen01g029630 Solanum pennellii HOM05D007369 ORTHO05D009369 1.1e-38 164.9 321 33.6
Aqoxy2G03087 Aquilegia oxysepala HOM05D007369 ORTHO05D009369 3.3e-38 163.3 298 37.6
MBI19_g37517_MAGBIO Magnolia biondii HOM05D007369 ORTHO05D009369 9.5e-38 161.8 356 36.5
CAN.G223.8 Capsicum annuum HOM05D007369 ORTHO05D009369 1.2e-37 161.4 350 32.3
ClCG05G005770 Citrullus lanatus HOM05D007369 ORTHO05D009369 5.2e-36 156.0 335 33.7
FAN22G0049 Fragaria x ananassa HOM05D007369 ORTHO05D009369 8.9e-36 155.2 340 34.1
Nn4g26033 Nelumbo nucifera HOM05D007369 ORTHO05D009369 1.2e-35 154.8 341 33.7
SalBow2G2600 Salvia bowleyana HOM05D007369 ORTHO05D009369 2.0e-35 154.1 329 35.9
vmacro08206 Vaccinium macrocarpon HOM05D007369 ORTHO05D009369 4.9e-34 149.4 322 33.9
THA.LOC104820236 Tarenaya hassleriana HOM05D007369 ORTHO05D009369 8.3e-34 148.7 308 34.7
Peaxi162Scf00386g00219 Petunia axillaris HOM05D007369 ORTHO05D009369 2.4e-33 147.1 320 32.5
Sabra08G0148500 Salix brachista HOM05D007369 ORTHO05D009369 5.4e-33 146.0 162 49.4
TWI73G1273 Tripterygium wilfordii HOM05D007369 ORTHO05D009369 7.0e-33 145.6 226 40.3
Migut.G00214 Erythranthe guttata HOM05D007369 ORTHO05D009369 2.1e-32 144.1 174 46.6
Dinv44429 Davidia involucrata HOM05D007369 ORTHO05D009369 7.3e-30 135.6 268 36.2
FAN17G3125 Fragaria x ananassa HOM05D007369 ORTHO05D009369 9.5e-30 135.2 116 57.8
SGA_v2.0_scaffold57G20253 Striga asiatica HOM05D007369 ORTHO05D009369 2.1e-29 134.0 300 33.7
MELO3C031713.2 Cucumis melo HOM05D007369 ORTHO05D009369 3.6e-29 133.3 359 31.5
Nitab4.5_0000197g0120 Nicotiana tabacum HOM05D007369 ORTHO05D009369 5.2e-28 129.4 315 33.0
MD16G1175700 Malus domestica HOM05D007369 ORTHO05D009369 6.8e-28 129.0 93 66.7
HanXRQChr03g0080111 Helianthus annuus HOM05D007369 ORTHO05D009369 4.6e-24 116.3 288 32.3
Mapoly0126s0031 Marchantia polymorpha HOM05D007369 ORTHO05D009369 2.3e-23 114.0 359 28.4
Sc13g0003630 Simmondsia chinensis HOM05D007369 ORTHO05D009369 6.6e-23 112.5 283 33.2
ECA240G2128 Erigeron canadensis HOM05D007369 ORTHO05D009369 4.3e-22 109.8 278 30.9
Lalb_Chr20g0118161 Lupinus albus HOM05D007369 ORTHO05D009369 4.0e-20 103.2 214 37.4
Atru.chr4.2749 Acer truncatum HOM05D007369 ORTHO05D009369 8.9e-20 102.1 147 42.2
Zm00001eb410560 Zea mays HOM05D007369 ORTHO05D009369 8.4e-18 95.5 112 42.9
Lalb_Chr20g0118171 Lupinus albus HOM05D007369 ORTHO05D009369 2.4e-12 77.4 56 73.2
AagrBONN_evm.TU.Sc2ySwM_362.2687 Anthoceros agrestis HOM05D007369 ORTHO05D009369 5.3e-12 76.3 60 53.3
MD16G1175500 Malus domestica HOM05D007369 ORTHO05D009369 6.9e-12 75.9 169 34.3
Lsat_1_v5_gn_5_50560 Lactuca sativa HOM05D007369 ORTHO05D009369 1.2e-11 75.1 102 46.1
Mapoly0008s0171 Marchantia polymorpha HOM05D007369 ORTHO05D009369 1.3e-10 71.6 67 46.3
Atru.chr4.2750 Acer truncatum HOM05D007369 ORTHO05D009369 1.7e-10 71.2 77 45.5
TAR365G0645 Trochodendron aralioides HOM05D007369 ORTHO05D009369 2.4e-09 67.4 173 32.4
Hund24911 Selenicereus undatus HOM05D007369 ORTHO05D009369 3.2e-09 67.0 347 27.7
VMungo0647G1723 Vigna mungo HOM05D007369 ORTHO05D009369 3.2e-09 67.0 79 49.4


User provided reference genes

Program Settings