Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_00573_v3 Cicer arietinum L. HOM05D003864 ORTHO05D004658 1.7e-187 659.1 313 100.0
LjContig00389g0005087 Lotus japonicus HOM05D003864 ORTHO05D004658 1.5e-146 523.1 295 84.1
TPR.G1486 Trifolium pratense HOM05D003864 ORTHO05D004658 1.8e-144 516.2 344 75.0
Medtr2g020190 Medicago truncatula HOM05D003864 ORTHO05D004658 7.4e-138 494.2 283 83.4
Phvul.006G161500 Phaseolus vulgaris HOM05D003864 ORTHO05D004658 1.3e-137 493.4 281 81.1
Glyma.15G097900 Glycine max HOM05D003864 ORTHO05D004658 1.6e-137 493.0 289 81.3
Glyma.13G215300 Glycine max HOM05D003864 ORTHO05D004658 2.0e-135 486.1 292 79.1
arahy.Tifrunner.gnm1.ann1.CLS5KG Arachis hypogaea HOM05D003864 ORTHO05D004658 6.5e-134 481.1 295 76.3
Lalb_Chr20g0118111 Lupinus albus HOM05D003864 ORTHO05D004658 3.3e-130 468.8 339 71.1
Lalb_Chr18g0055711 Lupinus albus HOM05D003864 ORTHO05D004658 5.0e-126 454.9 302 74.5
Glyma.05G133900 Glycine max HOM05D003864 ORTHO05D004658 2.5e-125 452.6 264 78.8
CiPaw.01G152900 Carya illinoinensis HOM05D003864 ORTHO05D004658 4.2e-125 451.8 262 78.6
arahy.Tifrunner.gnm1.ann1.ZU35GG Arachis hypogaea HOM05D003864 ORTHO05D004658 1.2e-124 450.3 303 71.9
Lj4g0016445 Lotus japonicus HOM05D003864 ORTHO05D004658 6.1e-124 448.0 310 69.4
Phvul.002G188400 Phaseolus vulgaris HOM05D003864 ORTHO05D004658 6.1e-124 448.0 297 70.4
Manes.03G191300 Manihot esculenta HOM05D003864 ORTHO05D004658 1.0e-123 447.2 262 78.2
Ca_18234_v3 Cicer arietinum L. HOM05D003864 ORTHO05D004658 5.1e-123 444.9 285 72.3
Ciclev10005325m.g Citrus clementina HOM05D003864 ORTHO05D004658 6.7e-123 444.5 291 71.1
CiPaw.02G086600 Carya illinoinensis HOM05D003864 ORTHO05D004658 1.1e-122 443.7 262 77.9
Gorai.011G185900 Gossypium raimondii HOM05D003864 ORTHO05D004658 5.7e-122 441.4 318 66.0
Gohir.D10G166700 Gossypium hirsutum HOM05D003864 ORTHO05D004658 9.7e-122 440.7 318 65.7
Glyma.08G088600 Glycine max HOM05D003864 ORTHO05D004658 1.3e-121 440.3 264 76.5
Potri.008G204700 Populus trichocarpa HOM05D003864 ORTHO05D004658 2.8e-121 439.1 262 76.0
Cfa015492 Carpinus fangiana HOM05D003864 ORTHO05D004658 3.7e-121 438.7 262 76.0
Gohir.A10G101440 Gossypium hirsutum HOM05D003864 ORTHO05D004658 3.7e-121 438.7 318 66.0
Prupe.1G142000 Prunus persica HOM05D003864 ORTHO05D004658 5.3e-120 434.9 266 75.6
Nn4g25986 Nelumbo nucifera HOM05D003864 ORTHO05D004658 9.1e-120 434.1 262 76.3
TWI53G0015 Tripterygium wilfordii HOM05D003864 ORTHO05D004658 2.0e-119 433.0 262 75.2
TWI53G1008 Tripterygium wilfordii HOM05D003864 ORTHO05D004658 2.0e-119 433.0 262 75.2
Eucgr.B01266 Eucalyptus grandis HOM05D003864 ORTHO05D004658 4.5e-119 431.8 262 74.4
TAR633G1069 Trochodendron aralioides HOM05D003864 ORTHO05D004658 5.9e-119 431.4 262 75.6
Nn3g21324 Nelumbo nucifera HOM05D003864 ORTHO05D004658 1.7e-118 429.9 273 71.1
TPR.G23836 Trifolium pratense HOM05D003864 ORTHO05D004658 1.7e-118 429.9 285 70.2
Actinidia23428 Actinidia chinensis HOM05D003864 ORTHO05D004658 2.2e-118 429.5 262 74.0
Haze_01063 Corylus avellana HOM05D003864 ORTHO05D004658 2.2e-118 429.5 266 74.8
Manes.15G016900 Manihot esculenta HOM05D003864 ORTHO05D004658 2.2e-118 429.5 263 75.3
ClCG06G005360 Citrullus lanatus HOM05D003864 ORTHO05D004658 3.8e-118 428.7 273 72.2
Psat1g187240 Pisum sativum HOM05D003864 ORTHO05D004658 3.8e-118 428.7 278 76.3
Sed0008062 Sechium edule HOM05D003864 ORTHO05D004658 5.0e-118 428.3 265 74.7
Atru.chr4.2755 Acer truncatum HOM05D003864 ORTHO05D004658 1.1e-117 427.2 288 69.4
FvH4_4g17200 Fragaria vesca HOM05D003864 ORTHO05D004658 1.1e-117 427.2 266 74.4
Sabra08G0157300 Salix brachista HOM05D003864 ORTHO05D004658 1.4e-117 426.8 291 68.7
vmacro08202 Vaccinium macrocarpon HOM05D003864 ORTHO05D004658 1.4e-117 426.8 272 73.2
Solyc01g067630.3 Solanum lycopersicum HOM05D003864 ORTHO05D004658 1.9e-117 426.4 262 74.8
Aqoxy2G03115 Aquilegia oxysepala HOM05D003864 ORTHO05D004658 2.5e-117 426.0 262 74.0
Duzib151G0071 Durio zibethinus HOM05D003864 ORTHO05D004658 2.5e-117 426.0 262 73.7
TAR362G0395 Trochodendron aralioides HOM05D003864 ORTHO05D004658 2.5e-117 426.0 262 74.8
PGSC0003DMG400030786 Solanum tuberosum HOM05D003864 ORTHO05D004658 3.2e-117 425.6 262 74.8
Lalb_Chr07g0188241 Lupinus albus HOM05D003864 ORTHO05D004658 7.2e-117 424.5 333 63.1
MELO3C021355.2 Cucumis melo HOM05D003864 ORTHO05D004658 9.4e-117 424.1 273 71.8
PGR031G0559 Punica granatum HOM05D003864 ORTHO05D004658 9.4e-117 424.1 262 73.3
GSVIVG01017804001 Vitis vinifera HOM05D003864 ORTHO05D004658 2.1e-116 422.9 276 70.7
MSTRG.10054 Avicennia marina HOM05D003864 ORTHO05D004658 3.6e-116 422.2 266 72.2
Medtr4g094742 Medicago truncatula HOM05D003864 ORTHO05D004658 4.7e-116 421.8 292 68.8
Cc03_g02350 Coffea canephora HOM05D003864 ORTHO05D004658 1.0e-115 420.6 266 72.9
CsaV3_6G017400 Cucumis sativus L. HOM05D003864 ORTHO05D004658 1.4e-115 420.2 265 73.2
Peaxi162Scf00033g01410 Petunia axillaris HOM05D003864 ORTHO05D004658 3.0e-115 419.1 270 73.3
Thecc.04G277700 Theobroma cacao HOM05D003864 ORTHO05D004658 6.7e-115 417.9 262 72.9
Sed0015457 Sechium edule HOM05D003864 ORTHO05D004658 2.0e-114 416.4 265 72.8
PSO210G7573 Papaver somniferum HOM05D003864 ORTHO05D004658 4.4e-114 415.2 261 72.8
AL4G36380 Arabidopsis lyrata HOM05D003864 ORTHO05D004658 1.7e-113 413.3 269 70.6
THA.LOC104820237 Tarenaya hassleriana HOM05D003864 ORTHO05D004658 2.8e-113 412.5 263 72.6
Nitab4.5_0001459g0140 Nicotiana tabacum HOM05D003864 ORTHO05D004658 3.1e-112 409.1 280 70.0
PSO170G3769 Papaver somniferum HOM05D003864 ORTHO05D004658 3.1e-112 409.1 261 71.6
Lj6A670T81 Lonicera japonica HOM05D003864 ORTHO05D004658 4.1e-112 408.7 266 71.1
Nitab4.5_0004537g0010 Nicotiana tabacum HOM05D003864 ORTHO05D004658 4.1e-112 408.7 318 63.2
Oeu044793.1 Olea europaea HOM05D003864 ORTHO05D004658 4.1e-112 408.7 267 70.0
CDE01G0506 Ceratophyllum demersum HOM05D003864 ORTHO05D004658 7.0e-112 407.9 262 71.0
Sc19g0004950 Simmondsia chinensis HOM05D003864 ORTHO05D004658 7.0e-112 407.9 276 67.8
Nitab4.5_0000784g0010 Nicotiana tabacum HOM05D003864 ORTHO05D004658 9.1e-112 407.5 262 72.5
PGR004G1016 Punica granatum HOM05D003864 ORTHO05D004658 1.2e-111 407.1 262 69.1
RcHm_v2.0_Chr4g0421021 Rosa chinensis HOM05D003864 ORTHO05D004658 2.0e-111 406.4 277 70.8
THA.LOC104821766 Tarenaya hassleriana HOM05D003864 ORTHO05D004658 2.6e-111 406.0 296 63.2
Lsat_1_v5_gn_5_56881 Lactuca sativa HOM05D003864 ORTHO05D004658 5.9e-111 404.8 261 71.3
Nitab4.5_0001054g0010 Nicotiana tabacum HOM05D003864 ORTHO05D004658 1.3e-110 403.7 286 67.8
C03p25940 Brassica napus HOM05D003864 ORTHO05D004658 1.7e-110 403.3 269 68.4
AT2G39080 Arabidopsis thaliana HOM05D003864 ORTHO05D004658 2.2e-110 402.9 268 70.1
MD13G1173800 Malus domestica HOM05D003864 ORTHO05D004658 2.9e-110 402.5 266 71.8
Carub.0004s2113 Capsella rubella HOM05D003864 ORTHO05D004658 3.8e-110 402.1 269 68.0
VMungo0540G0878 Vigna mungo HOM05D006883 ORTHO05D008624 8.5e-110 401.0 246 76.4
CAN.G256.9 Capsicum annuum HOM05D003864 ORTHO05D004658 1.5e-109 400.2 264 72.3
ECA240G1720 Erigeron canadensis HOM05D003864 ORTHO05D004658 7.2e-109 397.9 260 69.6
Migut.G00209 Erythranthe guttata HOM05D003864 ORTHO05D004658 1.6e-108 396.7 276 66.7
A03p21870 Brassica napus HOM05D003864 ORTHO05D004658 1.0e-107 394.0 282 65.2
Sp4g21430 Schrenkiella parvula HOM05D003864 ORTHO05D004658 1.0e-107 394.0 270 67.4
BraA05t19685Z Brassica rapa HOM05D003864 ORTHO05D004658 8.8e-107 391.0 269 66.5
Thhalv10016876m.g Eutrema salsugineum HOM05D003864 ORTHO05D004658 8.8e-107 391.0 262 68.7
BraA03t11423Z Brassica rapa HOM05D003864 ORTHO05D004658 1.2e-106 390.6 283 65.4
Ah.12g064180 Amaranthus hybridus HOM05D003864 ORTHO05D004658 2.6e-106 389.4 263 67.7
Os01g0367100 Oryza sativa ssp. japonica HOM05D003864 ORTHO05D004658 5.7e-106 388.3 262 67.9
EL10Ac6g14524 Beta vulgaris HOM05D003864 ORTHO05D004658 2.8e-105 386.0 270 67.4
DCAR_027110 Daucus carota HOM05D003864 ORTHO05D004658 3.7e-105 385.6 269 66.5
BcaB01g03648 Brassica carinata HOM05D003864 ORTHO05D004658 3.1e-104 382.5 278 64.0
Zm00001eb341670 Zea mays HOM05D003864 ORTHO05D004658 9.1e-104 380.9 262 66.4
Hund20596 Selenicereus undatus HOM05D003864 ORTHO05D004658 2.0e-103 379.8 266 68.0
Cpa.g.sc1008.4 Carica papaya HOM05D003864 ORTHO05D004658 2.7e-103 379.4 265 67.2
DCAR_002443 Daucus carota HOM05D003864 ORTHO05D004658 7.7e-103 377.9 263 65.8
Dinv38324 Davidia involucrata HOM05D003864 ORTHO05D004658 2.2e-102 376.3 240 73.8
Zm00001eb131760 Zea mays HOM05D003864 ORTHO05D004658 1.1e-101 374.0 262 65.3
Peaxi162Scf00386g00316 Petunia axillaris HOM05D003864 ORTHO05D004658 2.5e-101 372.9 262 69.5
BcaB02g09145 Brassica carinata HOM05D003864 ORTHO05D004658 1.0e-99 367.5 269 65.1
A05p07200 Brassica napus HOM05D003864 ORTHO05D004658 1.0e-99 367.5 269 63.6
Actinidia00050 Actinidia chinensis HOM05D003864 ORTHO05D004658 4.0e-99 365.5 230 72.6
BcaC02g12038 Brassica carinata HOM05D003864 ORTHO05D004658 3.4e-98 362.5 304 58.6
MD16G1174800 Malus domestica HOM05D003864 ORTHO05D004658 7.5e-98 361.3 303 60.4
BolC4t22455H Brassica oleracea HOM05D005803 ORTHO05D008090 1.3e-97 360.5 304 58.2
COL.COLO4_13927 Corchorus olitorius HOM05D003864 ORTHO05D004658 2.2e-97 359.8 262 65.6
VMungo0251G3051 Vigna mungo HOM05D003864 ORTHO05D004658 3.1e-96 355.9 297 58.9
CDE05G0625 Ceratophyllum demersum HOM05D003864 ORTHO05D004658 1.2e-95 354.0 262 61.8
HPP92_017180 Vanilla planifolia HOM05D003864 ORTHO05D004658 1.2e-95 354.0 299 56.5
Hma1.2p1_0150F.1_g066600 Hydrangea macrophylla HOM05D003864 ORTHO05D004658 2.0e-95 353.2 227 70.9
Rhsim02G0013600 Rhododendron simsii HOM05D003864 ORTHO05D004658 2.7e-95 352.8 262 63.7
Rhsim04G0216400 Rhododendron simsii HOM05D003864 ORTHO05D004658 3.5e-95 352.4 306 58.8
C04p08610 Brassica napus HOM05D003864 ORTHO05D004658 3.3e-93 345.9 309 56.0
vmacro15256 Vaccinium macrocarpon HOM05D003864 ORTHO05D004658 3.0e-91 339.3 318 53.8
vmacro22597 Vaccinium macrocarpon HOM05D003864 ORTHO05D004658 5.2e-91 338.6 318 53.8
SGA_v2.0_scaffold57G20242 Striga asiatica HOM05D003864 ORTHO05D004658 2.8e-89 332.8 294 57.5
arahy.Tifrunner.gnm1.ann1.858I9V Arachis hypogaea HOM05D003864 ORTHO05D004658 1.4e-88 330.5 333 52.9
Mapoly0090s0075 Marchantia polymorpha HOM05D003864 ORTHO05D004658 1.8e-88 330.1 273 58.6
arahy.Tifrunner.gnm1.ann1.WPBE4U Arachis hypogaea HOM05D003864 ORTHO05D004658 7.0e-88 328.2 324 53.1
Pp3c13_19760 Physcomitrium patens HOM05D003864 ORTHO05D004658 7.0e-88 328.2 270 55.2
ATR0706G015 Amborella trichopoda HOM05D003864 ORTHO05D004658 1.6e-87 327.0 273 59.0
Pp3c12_8620 Physcomitrium patens HOM05D003864 ORTHO05D004658 1.0e-86 324.3 273 55.7
AagrBONN_evm.TU.Sc2ySwM_344.1910 Anthoceros agrestis HOM05D003864 ORTHO05D004658 1.5e-85 320.5 267 56.6
MBI19_g44903_MAGBIO Magnolia biondii HOM05D003864 ORTHO05D004658 4.4e-82 308.9 269 56.5
SGA_v2.0_scaffold89G27550 Striga asiatica HOM05D003864 ORTHO05D004658 5.8e-82 308.5 265 55.8
FAN07G1078 Fragaria x ananassa HOM05D003864 ORTHO05D004658 1.1e-77 294.3 266 56.0
Aa31LG5G20520 Aethionema arabicum HOM05D003864 ORTHO05D004658 1.5e-77 293.9 286 51.4
FAN17G0790 Fragaria x ananassa HOM05D003864 ORTHO05D004658 3.3e-77 292.7 266 55.6
CARHR133840 Cardamine hirsuta HOM05D003864 ORTHO05D004658 1.4e-75 287.3 182 72.5
SMO356G0587 Selaginella moellendorffii HOM05D003864 ORTHO05D004658 4.0e-75 285.8 261 52.9
Sc25g0004750 Simmondsia chinensis HOM05D003864 ORTHO05D004658 9.8e-74 281.2 198 64.1
FAN22G0711 Fragaria x ananassa HOM05D003864 ORTHO05D004658 2.2e-73 280.0 272 53.3
CBR_g37156 Chara braunii HOM05D003864 ORTHO05D004658 4.6e-71 272.3 261 49.4
Os01g0367400 Oryza sativa ssp. japonica HOM05D003864 ORTHO05D004658 1.5e-69 267.3 262 50.4
AUR62007746 Chenopodium quinoa HOM05D003864 ORTHO05D004658 6.2e-68 261.9 263 50.2
MBI19_g26585_MAGBIO Magnolia biondii HOM05D003864 ORTHO05D004658 1.2e-66 257.7 262 49.6
QL06p007391 Quercus lobata HOM05D003864 ORTHO05D004658 4.9e-65 252.3 150 74.7
Dinv44425 Davidia involucrata HOM05D003864 ORTHO05D004658 2.4e-64 250.0 150 73.3
Psat7g088240 Pisum sativum HOM05D003864 ORTHO05D004658 4.1e-64 249.2 147 74.1
SalBow2G1899 Salvia bowleyana HOM05D003864 ORTHO05D004658 1.2e-63 247.7 160 68.8
Sopen01g029580 Solanum pennellii HOM05D003864 ORTHO05D004658 2.3e-62 243.4 150 74.0
PGSC0003DMG400010656 Solanum tuberosum HOM05D003864 ORTHO05D004658 3.9e-62 242.7 150 73.3
AUR62002937 Chenopodium quinoa HOM05D003864 ORTHO05D004658 1.1e-61 241.1 316 42.1
Solyc06g054530.3 Solanum lycopersicum HOM05D003864 ORTHO05D004658 1.1e-61 241.1 150 73.3
Sopen06g019600 Solanum pennellii HOM05D003864 ORTHO05D004658 9.5e-61 238.0 150 72.7
SHI00297 Sapria himalayana HOM05D003864 ORTHO05D004658 1.6e-60 237.3 484 33.3
CSS0038005 Camellia sinensis var. sinensis HOM05D003864 ORTHO05D004658 1.4e-59 234.2 182 64.3
CSS0001944 Camellia sinensis var. sinensis HOM05D003864 ORTHO05D004658 1.8e-59 233.8 182 63.7
BolC3t14979H Brassica oleracea HOM05D003864 ORTHO05D004658 3.1e-59 233.0 157 67.5
FAN12G3853 Fragaria x ananassa HOM05D003864 ORTHO05D004658 3.4e-58 229.6 231 51.5
C04p08680 Brassica napus HOM05D003864 ORTHO05D004658 2.4e-56 223.4 171 62.6
MCO15G076 Micromonas commoda HOM05D003864 ORTHO05D004658 7.1e-56 221.9 244 44.7
unitig_748.g8369 Utricularia gibba HOM05D000472 ORTHO05D000344 9.2e-56 221.5 167 61.1
Cre13.g608000 Chlamydomonas reinhardtii HOM05D003864 ORTHO05D004658 7.8e-55 218.4 272 43.4
PRCOL_00006073 Prasinoderma coloniale HOM05D003864 ORTHO05D004658 8.4e-49 198.4 345 33.3
unitig_748.g8370 Utricularia gibba HOM05D003864 ORTHO05D004658 7.3e-45 185.3 117 70.1
HanXRQChr13g0411231 Helianthus annuus HOM05D003864 ORTHO05D004658 4.0e-43 179.5 117 68.4
BolC4t22460H Brassica oleracea HOM05D003864 ORTHO05D004658 7.6e-42 175.3 134 61.9
BcaC02g12030 Brassica carinata HOM05D003864 ORTHO05D004658 1.7e-41 174.1 119 65.5
CDE12G0924 Ceratophyllum demersum HOM05D003864 ORTHO05D004658 6.4e-41 172.2 113 68.1
CDE12G0314 Ceratophyllum demersum HOM05D003864 ORTHO05D004658 3.2e-40 169.9 104 74.0
HanXRQChr13g0411221 Helianthus annuus HOM05D003864 ORTHO05D004658 6.0e-39 165.6 104 71.2
MSTRG.21813 Avicennia marina HOM05D003864 ORTHO05D004658 1.1e-37 161.4 104 69.2
SEGI_14152 Sequoiadendron giganteum HOM05D003864 ORTHO05D004658 1.5e-37 161.0 127 59.1
QL06p007393 Quercus lobata HOM05D003864 ORTHO05D004658 4.2e-32 142.9 82 76.8
CSS0041699 Camellia sinensis var. sinensis HOM05D003864 ORTHO05D004658 5.5e-32 142.5 186 43.5
RcHm_v2.0_Chr4g0421071 Rosa chinensis HOM05D003864 ORTHO05D004658 3.3e-29 133.3 138 52.2
CSS0003637 Camellia sinensis var. sinensis HOM05D003864 ORTHO05D004658 2.4e-27 127.1 82 63.4
CSS0011053 Camellia sinensis var. sinensis HOM05D003864 ORTHO05D004658 2.4e-27 127.1 82 63.4
SEGI_31487 Sequoiadendron giganteum HOM05D003864 ORTHO05D004658 7.6e-26 122.1 90 61.1
BcaNung07183 Brassica carinata HOM05D005803 ORTHO05D008090 2.3e-22 110.5 84 59.5
Actinidia25721 Actinidia chinensis HOM05D003864 ORTHO05D004658 3.1e-19 100.1 61 65.6
SEGI_13555 Sequoiadendron giganteum HOM05D003864 ORTHO05D004658 2.6e-18 97.1 72 56.9
RcHm_v2.0_Chr4g0421081 Rosa chinensis HOM05D003864 ORTHO05D004658 1.0e-17 95.1 60 73.3
CSS0015623 Camellia sinensis var. sinensis HOM05D003864 ORTHO05D004658 1.0e-14 85.1 50 74.0
Zm00001eb400060 Zea mays HOM05D003864 ORTHO05D004658 4.3e-13 79.7 67 61.2
Dinv02075 Davidia involucrata HOM05D003864 ORTHO05D035062 3.1e-11 73.6 55 60.0
Dinv08007 Davidia involucrata HOM05D003864 ORTHO05D035062 2.6e-10 70.5 53 60.4
Medtr8g027510 Medicago truncatula HOM05D003864 ORTHO05D004658 9.4e-08 62.0 37 78.4


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