Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_00572_v3 Cicer arietinum L. HOM05D006883 ORTHO05D008624 3.4e-239 831.2 421 100.0
Psat1g187280 Pisum sativum HOM05D006883 ORTHO05D008624 2.0e-218 762.3 421 91.4
Medtr2g020160 Medicago truncatula HOM05D006883 ORTHO05D008624 4.2e-205 718.0 423 87.7
TPR.G1530 Trifolium pratense HOM05D006883 ORTHO05D008624 3.7e-201 704.9 431 84.0
Lalb_Chr18g0055701 Lupinus albus HOM05D006883 ORTHO05D008624 3.4e-194 681.8 421 82.2
LjContig00389g0025618 Lotus japonicus HOM05D006883 ORTHO05D008624 4.4e-194 681.4 421 81.7
arahy.Tifrunner.gnm1.ann1.WI0ZBZ Arachis hypogaea HOM05D006883 ORTHO05D008624 7.0e-192 674.1 421 81.7
Lalb_Chr15g0087031 Lupinus albus HOM05D006883 ORTHO05D008624 7.0e-192 674.1 421 80.8
arahy.Tifrunner.gnm1.ann1.GN2N7N Arachis hypogaea HOM05D006883 ORTHO05D008624 5.9e-191 671.0 421 81.2
Glyma.15G097700 Glycine max HOM05D006883 ORTHO05D008624 2.9e-190 668.7 421 80.3
Glyma.13G215400 Glycine max HOM05D006883 ORTHO05D008624 1.2e-188 663.3 421 79.6
Phvul.006G161600 Phaseolus vulgaris HOM05D006883 ORTHO05D008624 6.1e-188 661.0 421 79.8
Lj6P670T41 Lonicera japonica HOM05D006883 ORTHO05D008624 6.0e-175 617.8 413 76.3
Ciclev10005043m.g Citrus clementina HOM05D006883 ORTHO05D008624 7.8e-175 617.5 423 75.4
Haze_01264 Corylus avellana HOM05D006883 ORTHO05D008624 2.3e-174 615.9 424 74.8
Gorai.011G186200 Gossypium raimondii HOM05D006883 ORTHO05D008624 2.3e-174 615.9 421 75.8
QL06p007513 Quercus lobata HOM05D006883 ORTHO05D008624 2.3e-174 615.9 424 75.2
Cfa015347 Carpinus fangiana HOM05D006883 ORTHO05D008624 8.6e-174 614.0 424 74.5
Gohir.A10G101275 Gossypium hirsutum HOM05D006883 ORTHO05D008624 5.6e-173 611.3 421 75.3
Manes.15G016500 Manihot esculenta HOM05D006883 ORTHO05D008624 2.8e-172 609.0 424 74.5
CiPaw.02G086300 Carya illinoinensis HOM05D006883 ORTHO05D008624 3.6e-172 608.6 424 75.0
FAN17G0491 Fragaria x ananassa HOM05D006883 ORTHO05D008624 8.1e-172 607.4 425 74.1
CAN.G556.8 Capsicum annuum HOM05D006883 ORTHO05D008624 1.1e-171 607.1 426 73.2
FvH4_4g17240 Fragaria vesca HOM05D006883 ORTHO05D008624 2.3e-171 605.9 425 73.9
FAN12G3260 Fragaria x ananassa HOM05D006883 ORTHO05D008624 2.3e-171 605.9 425 73.9
FAN22G2222 Fragaria x ananassa HOM05D006883 ORTHO05D008624 2.3e-171 605.9 425 73.4
COL.COLO4_13924 Corchorus olitorius HOM05D006883 ORTHO05D008624 4.0e-171 605.1 423 74.2
FAN12G0993 Fragaria x ananassa HOM05D006883 ORTHO05D008624 4.0e-171 605.1 425 73.6
Rhsim04G0216600 Rhododendron simsii HOM05D006883 ORTHO05D008624 5.2e-171 604.7 424 73.8
Potri.008G204900 Populus trichocarpa HOM05D006883 ORTHO05D008624 3.4e-170 602.1 423 72.6
Sopen01g029090 Solanum pennellii HOM05D006883 ORTHO05D008624 5.8e-170 601.3 397 76.1
Prupe.1G141800 Prunus persica HOM05D006883 ORTHO05D008624 7.5e-170 600.9 424 72.6
RcHm_v2.0_Chr4g0421151 Rosa chinensis HOM05D006883 ORTHO05D008624 7.5e-170 600.9 424 73.3
Nitab4.5_0000829g0010 Nicotiana tabacum HOM05D006883 ORTHO05D008624 1.3e-169 600.1 394 75.6
Sabra08G0157100 Salix brachista HOM05D006883 ORTHO05D008624 1.3e-169 600.1 423 72.6
CANSAT78G0922 Cannabis sativa HOM05D006883 ORTHO05D008624 2.2e-169 599.4 431 73.3
Aqoxy2G03105 Aquilegia oxysepala HOM05D006883 ORTHO05D008624 2.9e-169 599.0 424 73.3
CSS0008645 Camellia sinensis var. sinensis HOM05D006883 ORTHO05D008624 2.9e-169 599.0 400 76.8
PGSC0003DMG400022678 Solanum tuberosum HOM05D006883 ORTHO05D008624 2.9e-169 599.0 397 75.6
Nitab4.5_0002986g0100 Nicotiana tabacum HOM05D006883 ORTHO05D008624 3.7e-169 598.6 394 75.4
DCAR_030562 Daucus carota HOM05D006883 ORTHO05D008624 6.4e-169 597.8 422 72.5
vmacro08200 Vaccinium macrocarpon HOM05D006883 ORTHO05D008624 4.1e-168 595.1 424 73.3
Thecc.04G278100 Theobroma cacao HOM05D006883 ORTHO05D008624 7.1e-168 594.3 421 72.2
Eucgr.H03771 Eucalyptus grandis HOM05D006883 ORTHO05D008624 1.2e-167 593.6 424 72.2
Duzib052G0675 Durio zibethinus HOM05D006883 ORTHO05D008624 6.0e-167 591.3 422 72.5
AUR62041764 Chenopodium quinoa HOM05D006883 ORTHO05D008624 7.8e-167 590.9 422 72.7
Carub.0006s1695 Capsella rubella HOM05D006883 ORTHO05D008624 5.1e-166 588.2 420 71.7
MD13G1173600 Malus domestica HOM05D006883 ORTHO05D008624 5.1e-166 588.2 423 71.6
Peaxi162Scf00386g00096 Petunia axillaris HOM05D006883 ORTHO05D008624 5.1e-166 588.2 430 71.6
AL6G29930 Arabidopsis lyrata HOM05D006883 ORTHO05D008624 1.1e-165 587.0 420 71.0
TWI53G1857 Tripterygium wilfordii HOM05D006883 ORTHO05D008624 1.5e-165 586.6 422 73.0
Cc03_g02320 Coffea canephora HOM05D006883 ORTHO05D008624 2.5e-165 585.9 421 72.7
Actinidia23426 Actinidia chinensis HOM05D006883 ORTHO05D008624 3.3e-165 585.5 382 77.7
Aa31LG11G10960 Aethionema arabicum HOM05D006883 ORTHO05D008624 3.3e-165 585.5 420 71.7
AT5G18660 Arabidopsis thaliana HOM05D006883 ORTHO05D008624 5.6e-165 584.7 421 71.5
TWI53G0676 Tripterygium wilfordii HOM05D006883 ORTHO05D008624 5.6e-165 584.7 422 72.7
Ah.06g192160 Amaranthus hybridus HOM05D006883 ORTHO05D008624 9.5e-165 583.9 364 79.7
THA.LOC104802726 Tarenaya hassleriana HOM05D006883 ORTHO05D008624 1.2e-164 583.6 423 70.7
Actinidia40226 Actinidia chinensis HOM05D006883 ORTHO05D008624 2.1e-164 582.8 397 74.8
Nn4g26002 Nelumbo nucifera HOM05D006883 ORTHO05D008624 2.1e-164 582.8 373 77.5
PSO210G3900 Papaver somniferum HOM05D006883 ORTHO05D008624 2.1e-164 582.8 421 71.0
Lsat_1_v5_gn_3_24840 Lactuca sativa HOM05D006883 ORTHO05D008624 2.8e-164 582.4 394 74.1
CARHR194360 Cardamine hirsuta HOM05D006883 ORTHO05D008624 3.6e-164 582.0 421 71.5
PSO170G0113 Papaver somniferum HOM05D006883 ORTHO05D008624 3.6e-164 582.0 371 76.8
CsaV3_3G014130 Cucumis sativus L. HOM05D006883 ORTHO05D008624 4.7e-164 581.6 408 73.3
ECA246G3623 Erigeron canadensis HOM05D006883 ORTHO05D008624 6.2e-164 581.3 423 71.2
Migut.G00206 Erythranthe guttata HOM05D006883 ORTHO05D008624 6.2e-164 581.3 397 73.6
Sed0024317 Sechium edule HOM05D006883 ORTHO05D008624 6.2e-164 581.3 396 74.7
CDE11G0693 Ceratophyllum demersum HOM05D006883 ORTHO05D008624 1.1e-163 580.5 350 80.0
AUR62041032 Chenopodium quinoa HOM05D006883 ORTHO05D008624 1.8e-163 579.7 425 71.8
PGR004G1631 Punica granatum HOM05D006883 ORTHO05D008624 4.0e-163 578.6 429 69.7
TAR633G1607 Trochodendron aralioides HOM05D006883 ORTHO05D008624 6.8e-163 577.8 424 70.3
Thhalv10013668m.g Eutrema salsugineum HOM05D006883 ORTHO05D008624 8.9e-163 577.4 420 70.0
SalBow2G1088 Salvia bowleyana HOM05D006883 ORTHO05D008624 8.9e-163 577.4 394 73.4
MSTRG.10057 Avicennia marina HOM05D006883 ORTHO05D008624 2.0e-162 576.2 395 73.4
Oeu044787.1 Olea europaea HOM05D006883 ORTHO05D008624 3.4e-162 575.5 394 73.9
VMungo0540G0878 Vigna mungo HOM05D006883 ORTHO05D008624 4.4e-162 575.1 421 71.5
Dinv38322 Davidia involucrata HOM05D006883 ORTHO05D008624 7.6e-162 574.3 407 73.7
Sp6g25680 Schrenkiella parvula HOM05D006883 ORTHO05D008624 9.9e-162 573.9 420 69.5
Sc25g0004770 Simmondsia chinensis HOM05D006883 ORTHO05D008624 8.4e-161 570.9 351 78.9
BcaC04g18657 Brassica carinata HOM05D006883 ORTHO05D008624 1.4e-160 570.1 427 70.0
BolC9t58650H Brassica oleracea HOM05D006883 ORTHO05D008624 1.4e-160 570.1 427 70.0
HanXRQChr08g0208101 Helianthus annuus HOM05D006883 ORTHO05D008624 1.4e-160 570.1 397 73.3
Atru.BG.87.p Acer truncatum HOM05D006883 ORTHO05D008624 1.2e-159 567.0 349 81.1
BcaB08g36654 Brassica carinata HOM05D006883 ORTHO05D008624 3.9e-158 562.0 385 72.2
C09p57810 Brassica napus HOM05D006883 ORTHO05D008624 1.5e-157 560.1 426 69.0
unitig_748.g8372 Utricularia gibba HOM05D006883 ORTHO05D008624 1.9e-157 559.7 391 72.6
A10p20920 Brassica napus HOM05D006883 ORTHO05D008624 5.6e-157 558.1 413 69.5
BraA10t44156Z Brassica rapa HOM05D006883 ORTHO05D008624 2.1e-156 556.2 413 69.5
MBI19_g30852_MAGBIO Magnolia biondii HOM05D006883 ORTHO05D008624 7.6e-154 547.7 346 77.7
EL10Ac4g09099 Beta vulgaris HOM05D006883 ORTHO05D008624 1.4e-152 543.5 405 70.1
ATR0706G234 Amborella trichopoda HOM05D006883 ORTHO05D008624 7.1e-152 541.2 343 76.1
SGA_v2.0_scaffold973G53763 Striga asiatica HOM05D006883 ORTHO05D008624 6.2e-148 528.1 366 73.0
CSS0009780 Camellia sinensis var. sinensis HOM05D006883 ORTHO05D008624 1.8e-147 526.6 340 73.5
CDE02G1591 Ceratophyllum demersum HOM05D006883 ORTHO05D008624 1.8e-147 526.6 406 67.7
CSS0011936 Camellia sinensis var. sinensis HOM05D006883 ORTHO05D008624 2.4e-147 526.2 340 73.5
SEGI_20295 Sequoiadendron giganteum HOM05D006883 ORTHO05D008624 3.2e-144 515.8 343 72.6
Mapoly0058s0049 Marchantia polymorpha HOM05D006883 ORTHO05D008624 1.9e-141 506.5 398 63.8
HPP92_006930 Vanilla planifolia HOM05D006883 ORTHO05D008624 2.5e-141 506.1 345 70.1
AagrBONN_evm.TU.Sc2ySwM_369.460 Anthoceros agrestis HOM05D006883 ORTHO05D008624 9.0e-139 497.7 406 63.1
Pp3c7_3620 Physcomitrium patens HOM05D006883 ORTHO05D008624 1.2e-135 487.3 407 62.2
Os03g0351200 Oryza sativa ssp. japonica HOM05D006883 ORTHO05D008624 4.8e-132 475.3 343 68.2
Zm00001eb016830 Zea mays HOM05D006883 ORTHO05D008624 8.2e-132 474.6 343 68.8
CBR_g77624 Chara braunii HOM05D006883 ORTHO05D008624 4.5e-130 468.8 348 67.5
Gohir.D10G166900 Gossypium hirsutum HOM05D006883 ORTHO05D008624 1.9e-125 453.4 254 86.6
Cpa.g.sc1008.1 Carica papaya HOM05D006883 ORTHO05D008624 2.0e-114 416.8 320 68.8
Cre01.g042800 Chlamydomonas reinhardtii HOM05D006883 ORTHO05D008624 1.0e-113 414.5 344 59.9
SMO174G0102 Selaginella moellendorffii HOM05D006883 ORTHO05D008624 4.7e-111 405.6 344 60.8
MCO03G528 Micromonas commoda HOM05D006883 ORTHO05D008624 3.3e-109 399.4 370 57.0
DCAR_030560 Daucus carota HOM05D006883 ORTHO05D008624 9.7e-101 371.3 233 78.1
MELO3C006606.2 Cucumis melo HOM05D006883 ORTHO05D008624 1.1e-99 367.9 222 79.7
Solyc01g067290.3 Solanum lycopersicum HOM05D006883 ORTHO05D008624 9.7e-93 344.7 192 84.9
DCAR_030558 Daucus carota HOM05D006883 ORTHO05D008624 7.0e-91 338.6 192 82.3
PRCOL_00006445 Prasinoderma coloniale HOM05D006883 ORTHO05D008624 6.1e-71 272.3 334 43.4
Oeu061954.1 Olea europaea HOM05D006883 ORTHO05D008624 1.1e-32 145.2 121 61.2
Migut.M00184 Erythranthe guttata HOM05D006883 ORTHO05D008624 1.4e-19 101.7 103 54.4
GSVIVG01017797001 Vitis vinifera HOM05D006883 ORTHO05D008624 4.6e-18 96.7 136 49.3
MCO09G679 Micromonas commoda HOM05D006026 ORTHO05D007502 3.9e-09 67.0 329 23.4
CBR_g37527 Chara braunii HOM05D006026 ORTHO05D007502 2.5e-08 64.3 341 23.5
Glyma.11G070200 Glycine max HOM05D000342 ORTHO05D000217 4.3e-08 63.5 240 25.4
Cre02.g142146 Chlamydomonas reinhardtii HOM05D006026 ORTHO05D007502 5.7e-08 63.2 367 22.9
Glyma.01G172900 Glycine max HOM05D000342 ORTHO05D000217 5.7e-08 63.2 240 25.4
AagrBONN_evm.TU.Sc2ySwM_228.3661 Anthoceros agrestis HOM05D006026 ORTHO05D007502 7.4e-08 62.8 329 21.6
Aqoxy6G01749 Aquilegia oxysepala HOM05D006026 ORTHO05D007502 7.4e-08 62.8 408 21.8
Haze_05572 Corylus avellana HOM05D005455 ORTHO05D007017 1.3e-07 62.0 240 27.5
Pp3c27_8140 Physcomitrium patens HOM05D006026 ORTHO05D007502 1.3e-07 62.0 333 20.4
SMO011G0028 Selaginella moellendorffii HOM05D006026 ORTHO05D007502 1.3e-07 62.0 327 21.7
Pp3c15_7750 Physcomitrium patens HOM05D005785 ORTHO05D007017 4.8e-07 60.1 237 26.6
BcaB08g34904 Brassica carinata HOM05D000834 ORTHO05D006956 6.3e-07 59.7 281 25.3
C07p00720 Brassica napus HOM05D000834 ORTHO05D006956 6.3e-07 59.7 284 25.4
AUR62007401 Chenopodium quinoa HOM05D000342 ORTHO05D000217 6.3e-07 59.7 248 27.0
PSO541G6277 Papaver somniferum HOM05D006026 ORTHO05D007502 8.2e-07 59.3 398 22.1
HPP92_014702 Vanilla planifolia HOM05D000342 ORTHO05D000217 1.1e-06 58.9 256 24.2
PSO675G4706 Papaver somniferum HOM05D006026 ORTHO05D007502 1.4e-06 58.5 397 21.7
A09p58940 Brassica napus HOM05D000834 ORTHO05D006956 1.8e-06 58.2 284 25.0
BraA09t41279Z Brassica rapa HOM05D000834 ORTHO05D006956 1.8e-06 58.2 284 25.0
Carub.0003s1872 Capsella rubella HOM05D005785 ORTHO05D007962 1.8e-06 58.2 268 26.1
Migut.B00273 Erythranthe guttata HOM05D005785 ORTHO05D007962 1.8e-06 58.2 226 27.0
Phvul.009G116200 Phaseolus vulgaris HOM05D006026 ORTHO05D007502 1.8e-06 58.2 347 20.5
QL12p000516 Quercus lobata HOM05D000342 ORTHO05D000217 1.8e-06 58.2 262 24.0
SMO146G0207 Selaginella moellendorffii HOM05D005785 ORTHO05D007962 1.8e-06 58.2 194 29.4
MSTRG.19950 Avicennia marina HOM05D006026 ORTHO05D007502 2.4e-06 57.8 330 21.2
C09p15230 Brassica napus HOM05D000834 ORTHO05D006956 2.4e-06 57.8 276 25.0
Rhsim11G0172800 Rhododendron simsii HOM05D005785 ORTHO05D007962 2.4e-06 57.8 197 31.5
Sabra11G0070500 Salix brachista HOM05D005455 ORTHO05D007017 2.4e-06 57.8 217 27.2
Aqoxy6G00992 Aquilegia oxysepala HOM05D005785 ORTHO05D007962 3.1e-06 57.4 245 25.7
A07p00360 Brassica napus HOM05D000834 ORTHO05D000909 3.1e-06 57.4 284 25.0
BraA07t27827Z Brassica rapa HOM05D000834 ORTHO05D006956 3.1e-06 57.4 284 25.0
Lj2g0027531 Lotus japonicus HOM05D000342 ORTHO05D000217 3.1e-06 57.4 229 24.9
Nn6g31746 Nelumbo nucifera HOM05D006026 ORTHO05D007502 3.1e-06 57.4 390 21.3
Potri.011G079600 Populus trichocarpa HOM05D005455 ORTHO05D007017 3.1e-06 57.4 236 27.5
arahy.Tifrunner.gnm1.ann1.7EEG5T Arachis hypogaea HOM05D005455 ORTHO05D007017 4.1e-06 57.0 194 26.8
arahy.Tifrunner.gnm1.ann1.A1R83D Arachis hypogaea HOM05D000342 ORTHO05D000217 4.1e-06 57.0 243 24.3
CAN.G1.48 Capsicum annuum HOM05D005785 ORTHO05D007962 4.1e-06 57.0 230 27.8
Sp3g33600 Schrenkiella parvula HOM05D000834 ORTHO05D006956 4.1e-06 57.0 283 24.4
VMungo1309G0279 Vigna mungo HOM05D006026 ORTHO05D007502 4.1e-06 57.0 305 21.3
BcaC04g22796 Brassica carinata HOM05D000834 ORTHO05D006956 5.3e-06 56.6 284 25.0
A09p12840 Brassica napus HOM05D000834 ORTHO05D006956 5.3e-06 56.6 284 25.0
BolC9t54430H Brassica oleracea HOM05D000834 ORTHO05D006956 5.3e-06 56.6 284 25.0
BraA09t36931Z Brassica rapa HOM05D000834 ORTHO05D006956 5.3e-06 56.6 284 25.0
MELO3C022760.2 Cucumis melo HOM05D000342 ORTHO05D000217 5.3e-06 56.6 329 22.8
Glyma.04G001500 Glycine max HOM05D006026 ORTHO05D007502 5.3e-06 56.6 277 22.4
Lj5A173T64 Lonicera japonica HOM05D006026 ORTHO05D007502 5.3e-06 56.6 409 20.8
Thecc.02G047100 Theobroma cacao HOM05D006026 ORTHO05D007502 5.3e-06 56.6 379 22.2
Atru.chr5.3501 Acer truncatum HOM05D006026 ORTHO05D007502 6.9e-06 56.2 378 19.8
BcaC07g41219 Brassica carinata HOM05D000834 ORTHO05D006956 6.9e-06 56.2 284 24.6
C08p42260 Brassica napus HOM05D000834 ORTHO05D006956 6.9e-06 56.2 284 24.6
BolC8t51785H Brassica oleracea HOM05D000834 ORTHO05D006956 6.9e-06 56.2 284 24.6
CBR_g23485 Chara braunii HOM05D005785 ORTHO05D007962 6.9e-06 56.2 135 31.1
MELO3C018409.2 Cucumis melo HOM05D005785 ORTHO05D007962 6.9e-06 56.2 235 26.8
PGSC0003DMG400022577 Solanum tuberosum HOM05D000342 ORTHO05D000217 6.9e-06 56.2 239 23.4
HPP92_019944 Vanilla planifolia HOM05D000342 ORTHO05D000217 6.9e-06 56.2 330 23.3
BcaC06g36723 Brassica carinata HOM05D000834 ORTHO05D006956 9.0e-06 55.8 280 25.0
BolC7t40517H Brassica oleracea HOM05D000834 ORTHO05D006956 9.0e-06 55.8 280 25.0
BraA05t21908Z Brassica rapa HOM05D005785 ORTHO05D007962 9.0e-06 55.8 336 24.7
Nitab4.5_0000783g0230 Nicotiana tabacum HOM05D006026 ORTHO05D007502 9.0e-06 55.8 333 20.1
Potri.007G036500 Populus trichocarpa HOM05D000342 ORTHO05D000217 9.0e-06 55.8 255 23.5


User provided reference genes

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