Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_00545_v3 Cicer arietinum L. HOM05D008329 ORTHO05D010502 4.5e-61 238.0 146 100.0
Medtr2g019510 Medicago truncatula HOM05D008329 ORTHO05D010502 1.2e-34 150.2 145 73.1
TPR.G26681 Trifolium pratense HOM05D008329 ORTHO05D010502 3.0e-33 145.6 158 62.7
Psat1g190560 Pisum sativum HOM05D008329 ORTHO05D010502 2.2e-28 129.4 115 67.0
Lalb_Chr15g0086851 Lupinus albus HOM05D008329 ORTHO05D010502 1.5e-24 116.7 136 57.4
Phvul.006G164500 Phaseolus vulgaris HOM05D008329 ORTHO05D010502 1.3e-23 113.6 112 63.4
Lalb_Chr18g0055481 Lupinus albus HOM05D008329 ORTHO05D010502 4.5e-21 105.1 141 50.4
Glyma.15G094400 Glycine max HOM05D008329 ORTHO05D010502 2.9e-20 102.4 147 54.4
Glyma.13G218000 Glycine max HOM05D008329 ORTHO05D010502 9.4e-19 97.4 95 62.1
VMungo0540G1040 Vigna mungo HOM05D008329 ORTHO05D010502 1.2e-18 97.1 99 58.6
Haze_05589 Corylus avellana HOM05D008329 ORTHO05D010502 3.3e-16 89.0 144 41.7
Prupe.4G080200 Prunus persica HOM05D008329 ORTHO05D010502 7.0e-14 81.3 109 53.2
arahy.Tifrunner.gnm1.ann1.3F4JYQ Arachis hypogaea HOM05D008329 ORTHO05D010502 1.1e-11 73.9 43 81.4
Cfa000951 Carpinus fangiana HOM05D008329 ORTHO05D010502 1.5e-11 73.6 115 45.2
CiPaw.10G092100 Carya illinoinensis HOM05D008329 ORTHO05D010502 1.5e-11 73.6 140 40.0
FvH4_3g05631 Fragaria vesca HOM05D008329 ORTHO05D010502 1.5e-11 73.6 95 47.4
FAN11G1031 Fragaria x ananassa HOM05D008329 ORTHO05D010502 1.5e-11 73.6 95 47.4
arahy.Tifrunner.gnm1.ann1.I5NJB4 Arachis hypogaea HOM05D008329 ORTHO05D010502 3.2e-11 72.4 42 81.0
DCAR_003919 Daucus carota HOM05D000413 ORTHO05D000292 7.2e-11 71.2 94 44.7
Hma1.2p1_0286F.1_g114040 Hydrangea macrophylla HOM05D008329 ORTHO05D010502 7.2e-11 71.2 113 41.6
Oeu052372.1 Olea europaea HOM05D008329 ORTHO05D010502 9.4e-11 70.9 113 44.2
QL05p058297 Quercus lobata HOM05D008329 ORTHO05D010502 2.1e-10 69.7 102 41.2
Manes.15G120700 Manihot esculenta HOM05D008329 ORTHO05D010502 2.7e-10 69.3 141 36.2
FAN16G0699 Fragaria x ananassa HOM05D008329 ORTHO05D010502 4.7e-10 68.6 92 46.7
Thecc.06G151200 Theobroma cacao HOM05D008329 ORTHO05D010502 1.8e-09 66.6 108 42.6
CiPaw.09G124100 Carya illinoinensis HOM05D008329 ORTHO05D010502 3.0e-09 65.9 138 34.8
Potri.004G132400 Populus trichocarpa HOM05D008329 ORTHO05D010502 3.0e-09 65.9 144 38.2
Sed0024982 Sechium edule HOM05D008329 ORTHO05D010502 5.2e-09 65.1 35 80.0
Atru.chr10.1238 Acer truncatum HOM05D008329 ORTHO05D010502 1.2e-08 63.9 111 44.1
Nn3g20763 Nelumbo nucifera HOM05D008329 ORTHO05D010502 1.2e-08 63.9 112 40.2
COL.COLO4_31077 Corchorus olitorius HOM05D008329 ORTHO05D010502 2.0e-08 63.2 49 65.3
Thhalv10027023m.g Eutrema salsugineum HOM05D008329 ORTHO05D010502 4.4e-08 62.0 162 32.1
PGSC0003DMG400037562 Solanum tuberosum HOM05D008329 ORTHO05D010502 9.7e-08 60.8 35 68.6
Migut.M00911 Erythranthe guttata HOM05D008329 ORTHO05D010502 1.3e-07 60.5 38 68.4
Gohir.A05G148400 Gossypium hirsutum HOM05D008329 ORTHO05D010502 1.3e-07 60.5 108 38.0
Gohir.D05G150900 Gossypium hirsutum HOM05D008329 ORTHO05D010502 1.3e-07 60.5 108 38.0
Gorai.009G155000 Gossypium raimondii HOM05D008329 ORTHO05D010502 1.3e-07 60.5 108 38.0
Duzib235G1274 Durio zibethinus HOM05D008329 ORTHO05D010502 1.7e-07 60.1 84 46.4
CsaV3_6G051710 Cucumis sativus L. HOM05D008329 ORTHO05D010502 2.8e-07 59.3 43 62.8
ClCG01G024590 Citrullus lanatus HOM05D008329 ORTHO05D010502 3.7e-07 58.9 34 76.5
MELO3C007136.2 Cucumis melo HOM05D008329 ORTHO05D010502 3.7e-07 58.9 34 76.5
MBI07_g26350_MAGBIO Magnolia biondii HOM05D008329 ORTHO05D010502 4.8e-07 58.5 101 43.6
C01p12160 Brassica napus HOM05D008329 ORTHO05D010502 1.1e-06 57.4 110 41.8
Sp7g15760 Schrenkiella parvula HOM05D008329 ORTHO05D010502 1.4e-06 57.0 152 33.6
BolC1t01190H Brassica oleracea HOM05D008329 ORTHO05D010502 3.1e-06 55.8 110 40.9
Cpa.g.sc166.12 Carica papaya HOM05D008329 ORTHO05D010502 3.1e-06 55.8 60 51.7
AL7G36060 Arabidopsis lyrata HOM05D008329 ORTHO05D010502 4.1e-06 55.5 39 71.8
AT4G18335 Arabidopsis thaliana HOM05D008329 ORTHO05D010502 4.1e-06 55.5 39 71.8
BraA01t00969Z Brassica rapa HOM05D008329 ORTHO05D010502 5.3e-06 55.1 98 41.8


User provided reference genes

Program Settings