Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_00537_v3 Cicer arietinum L. HOM05D007598 ORTHO05D009632 2.5e-28 128.3 74 100.0
Glyma.15G093500 Glycine max HOM05D007598 ORTHO05D009632 2.7e-22 108.2 77 77.9
Psat1g188680 Pisum sativum HOM05D007598 ORTHO05D009632 1.0e-21 106.3 77 76.6
Glyma.13G218700 Glycine max HOM05D007598 ORTHO05D009632 1.7e-21 105.5 74 75.7
Lj6g0001552 Lotus japonicus HOM05D007598 ORTHO05D009632 2.3e-21 105.1 56 89.3
arahy.Tifrunner.gnm1.ann1.A3G0A3 Arachis hypogaea HOM05D007598 ORTHO05D009632 3.9e-21 104.4 81 72.8
arahy.Tifrunner.gnm1.ann1.KTXA2U Arachis hypogaea HOM05D007598 ORTHO05D009632 3.9e-21 104.4 81 72.8
Lalb_Chr20g0117881 Lupinus albus HOM05D007598 ORTHO05D009632 3.9e-21 104.4 73 75.3
Prupe.4G081500 Prunus persica HOM05D007598 ORTHO05D009632 6.6e-21 103.6 61 83.6
Phvul.006G165400 Phaseolus vulgaris HOM05D007598 ORTHO05D009632 1.5e-20 102.4 77 71.4
Medtr2g019240 Medicago truncatula HOM05D007598 ORTHO05D009632 2.5e-20 101.7 61 83.6
RcHm_v2.0_Chr5g0014281 Rosa chinensis HOM05D007598 ORTHO05D009632 2.5e-20 101.7 60 83.3
FvH4_3g05470 Fragaria vesca HOM05D007598 ORTHO05D009632 7.3e-20 100.1 57 86.0
FAN11G3574 Fragaria x ananassa HOM05D007598 ORTHO05D009632 7.3e-20 100.1 57 86.0
DCAR_027909 Daucus carota HOM05D007598 ORTHO05D009632 2.1e-19 98.6 58 77.6
FAN16G2639 Fragaria x ananassa HOM05D007598 ORTHO05D009632 2.1e-19 98.6 57 84.2
FAN21G2813 Fragaria x ananassa HOM05D007598 ORTHO05D009632 2.1e-19 98.6 57 84.2
Lsat_1_v5_gn_7_28481 Lactuca sativa HOM05D007598 ORTHO05D009632 2.1e-19 98.6 76 69.7
MD05G1283100 Malus domestica HOM05D007598 ORTHO05D009632 2.8e-19 98.2 61 78.7
CiPaw.10G091200 Carya illinoinensis HOM05D007598 ORTHO05D009632 3.6e-19 97.8 58 82.8
Nitab4.5_0000420g0040 Nicotiana tabacum HOM05D007598 ORTHO05D009632 3.6e-19 97.8 74 63.5
AUR62030196 Chenopodium quinoa HOM05D007598 ORTHO05D009632 6.2e-19 97.1 61 77.0
HanXRQChr15g0480881 Helianthus annuus HOM05D007598 ORTHO05D009632 6.2e-19 97.1 77 64.9
AUR62002748 Chenopodium quinoa HOM05D007598 ORTHO05D009632 8.1e-19 96.7 61 75.4
FAN25G0892 Fragaria x ananassa HOM05D007598 ORTHO05D009632 8.1e-19 96.7 57 82.5
HanXRQChr04g0114301 Helianthus annuus HOM05D007598 ORTHO05D009632 8.1e-19 96.7 57 77.2
Thecc.06G149600 Theobroma cacao HOM05D007598 ORTHO05D009632 8.1e-19 96.7 82 64.6
CSS0006536 Camellia sinensis var. sinensis HOM05D007598 ORTHO05D009632 1.1e-18 96.3 78 62.8
MELO3C007128.2 Cucumis melo HOM05D007598 ORTHO05D009632 1.1e-18 96.3 59 79.7
Migut.M00903 Erythranthe guttata HOM05D007598 ORTHO05D009632 1.4e-18 95.9 76 68.4
Nn3g20182 Nelumbo nucifera HOM05D007598 ORTHO05D009632 1.4e-18 95.9 61 77.0
Potri.011G084300 Populus trichocarpa HOM05D007598 ORTHO05D009632 1.4e-18 95.9 57 73.7
CSS0035986 Camellia sinensis var. sinensis HOM05D007598 ORTHO05D009632 1.8e-18 95.5 57 75.4
ClCG01G024670 Citrullus lanatus HOM05D007598 ORTHO05D009632 1.8e-18 95.5 58 81.0
Cc00_g10360 Coffea canephora HOM05D007598 ORTHO05D009632 2.4e-18 95.1 79 63.3
Cfa000936 Carpinus fangiana HOM05D007598 ORTHO05D009632 3.1e-18 94.7 60 78.3
CsaV3_6G051780 Cucumis sativus L. HOM05D007598 ORTHO05D009632 3.1e-18 94.7 59 78.0
MD10G1261400 Malus domestica HOM05D007598 ORTHO05D009632 3.1e-18 94.7 57 80.7
Sed0007826 Sechium edule HOM05D007598 ORTHO05D009632 3.1e-18 94.7 57 80.7
Actinidia39580 Actinidia chinensis HOM05D007598 ORTHO05D009632 4.0e-18 94.4 59 74.6
Nitab4.5_0006887g0010 Nicotiana tabacum HOM05D007598 ORTHO05D009632 4.0e-18 94.4 72 66.7
PGSC0003DMG400021093 Solanum tuberosum HOM05D007598 ORTHO05D009632 4.0e-18 94.4 78 64.1
Dinv32243 Davidia involucrata HOM05D007598 ORTHO05D009632 5.3e-18 94.0 59 74.6
Sabra11G0066800 Salix brachista HOM05D007598 ORTHO05D009632 5.3e-18 94.0 57 71.9
Rhsim02G0159000 Rhododendron simsii HOM05D007598 ORTHO05D009632 6.9e-18 93.6 77 58.4
Carub.0004s1626 Capsella rubella HOM05D007598 ORTHO05D009632 9.0e-18 93.2 84 60.7
Migut.M01992 Erythranthe guttata HOM05D007598 ORTHO05D009632 1.2e-17 92.8 76 65.8
Gohir.D10G042400 Gossypium hirsutum HOM05D007598 ORTHO05D009632 1.2e-17 92.8 57 78.9
Manes.17G070801 Manihot esculenta HOM05D007598 ORTHO05D009632 1.2e-17 92.8 61 73.8
Atru.chr10.1775 Acer truncatum HOM05D007598 ORTHO05D009632 1.5e-17 92.4 60 75.0
SalBow8G5536 Salvia bowleyana HOM05D007598 ORTHO05D009632 3.4e-17 91.3 62 72.6
Actinidia07703 Actinidia chinensis HOM05D007598 ORTHO05D009632 4.5e-17 90.9 59 72.9
Sopen02g019560 Solanum pennellii HOM05D007598 ORTHO05D009632 5.8e-17 90.5 78 62.8
AT2G34585 Arabidopsis thaliana HOM05D007598 ORTHO05D009632 7.6e-17 90.1 63 71.4
BcaB06g28784 Brassica carinata HOM05D007598 ORTHO05D009632 7.6e-17 90.1 85 60.0
CAN.G702.32 Capsicum annuum HOM05D007598 ORTHO05D009632 7.6e-17 90.1 58 70.7
Thhalv10017600m.g Eutrema salsugineum HOM05D007598 ORTHO05D009632 7.6e-17 90.1 82 62.2
EL10Ac8g19673 Beta vulgaris HOM05D007598 ORTHO05D009632 9.9e-17 89.7 58 72.4
CARHR128680 Cardamine hirsuta HOM05D007598 ORTHO05D009632 9.9e-17 89.7 84 58.3
MBI02_g15148_MAGBIO Magnolia biondii HOM05D007598 ORTHO05D009632 9.9e-17 89.7 58 74.1
Nitab4.5_0002744g0030 Nicotiana tabacum HOM05D007598 ORTHO05D009632 9.9e-17 89.7 73 60.3
Aqoxy7G00246 Aquilegia oxysepala HOM05D007598 ORTHO05D009632 1.3e-16 89.4 59 71.2
AL4G30560 Arabidopsis lyrata HOM05D007598 ORTHO05D009632 1.3e-16 89.4 82 61.0
THA.LOC104820651 Tarenaya hassleriana HOM05D007598 ORTHO05D009632 1.3e-16 89.4 57 77.2
A04p26490 Brassica napus HOM05D007598 ORTHO05D009632 1.7e-16 89.0 86 59.3
C04p63910 Brassica napus HOM05D007598 ORTHO05D009632 1.7e-16 89.0 86 59.3
BolC4t27858H Brassica oleracea HOM05D007598 ORTHO05D009632 1.7e-16 89.0 86 59.3
BraA04t18153Z Brassica rapa HOM05D007598 ORTHO05D009632 1.7e-16 89.0 86 59.3
Aa31LG10G6810 Aethionema arabicum HOM05D007598 ORTHO05D009632 2.9e-16 88.2 83 56.6
Duzib235G0096 Durio zibethinus HOM05D007598 ORTHO05D009632 2.9e-16 88.2 63 69.8
Sp4g16850 Schrenkiella parvula HOM05D007598 ORTHO05D009632 2.9e-16 88.2 85 60.0
Sc05g0006160 Simmondsia chinensis HOM05D007598 ORTHO05D009632 3.8e-16 87.8 73 63.0
Solyc02g070470.1 Solanum lycopersicum HOM05D007598 ORTHO05D009632 4.9e-16 87.4 78 61.5
CANSAT35G0825 Cannabis sativa HOM05D007598 ORTHO05D009632 6.4e-16 87.0 60 70.0
Rhsim13G0114100 Rhododendron simsii HOM05D007598 ORTHO05D009632 6.4e-16 87.0 54 75.9
Cpa.g.sc170.27 Carica papaya HOM05D007598 ORTHO05D009632 8.4e-16 86.7 61 70.5
QL05p057697 Quercus lobata HOM05D007598 ORTHO05D009632 1.1e-15 86.3 60 71.7
TAR626G0451 Trochodendron aralioides HOM05D007598 ORTHO05D009632 1.1e-15 86.3 56 73.2
Ah.14g086510 Amaranthus hybridus HOM05D007598 ORTHO05D009632 1.4e-15 85.9 56 73.2
PGR042G1521 Punica granatum HOM05D007598 ORTHO05D009632 1.4e-15 85.9 53 75.5
TWI53G0871 Tripterygium wilfordii HOM05D007598 ORTHO05D009632 4.2e-15 84.3 51 80.4
HPP92_000988 Vanilla planifolia HOM05D007598 ORTHO05D009632 5.4e-15 84.0 69 60.9
unitig_749.g13736 Utricularia gibba HOM05D007598 ORTHO05D009632 7.1e-15 83.6 53 73.6
PSO541G2526 Papaver somniferum HOM05D007598 ORTHO05D009632 1.2e-14 82.8 56 69.6
COL.COLO4_31062 Corchorus olitorius HOM05D007598 ORTHO05D009632 6.0e-14 80.5 46 80.4
ATR1098G093 Amborella trichopoda HOM05D007598 ORTHO05D009632 1.8e-13 79.0 56 62.5
ECA236G0778 Erigeron canadensis HOM05D007598 ORTHO05D009632 2.3e-13 78.6 46 78.3
Ciclev10017916m.g Citrus clementina HOM05D007598 ORTHO05D009632 3.0e-13 78.2 62 62.9
PGSC0003DMG400012092 Solanum tuberosum HOM05D007598 ORTHO05D009632 6.7e-13 77.0 50 70.0
Os07g0154300 Oryza sativa ssp. japonica HOM05D007598 ORTHO05D009632 5.6e-12 73.9 48 68.8
SEGI_36626 Sequoiadendron giganteum HOM05D007598 ORTHO05D009632 2.1e-11 72.0 48 64.6
Zm00001eb117510 Zea mays HOM05D007598 ORTHO05D009632 2.1e-11 72.0 47 68.1
Mapoly0055s0099 Marchantia polymorpha HOM05D007598 ORTHO05D009632 6.9e-10 67.0 49 59.2
Pp3c14_11250 Physcomitrium patens HOM05D007598 ORTHO05D009632 1.5e-09 65.9 54 55.6
Actinidia16706 Actinidia chinensis HOM05D000667 ORTHO05D004096 4.5e-09 64.3 57 59.6


User provided reference genes

Program Settings