Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_00530_v3 Cicer arietinum L. HOM05D007268 ORTHO05D009152 4.6e-58 227.6 112 100.0
Medtr2g019100 Medicago truncatula HOM05D007268 ORTHO05D009152 3.5e-50 201.4 110 90.0
TPR.G26254 Trifolium pratense HOM05D007268 ORTHO05D009152 1.1e-48 196.4 110 90.0
Psat1g188600 Pisum sativum HOM05D007268 ORTHO05D009152 1.5e-48 196.1 110 88.2
AT4G18372 Arabidopsis thaliana HOM05D007268 ORTHO05D009152 2.7e-42 175.3 111 75.7
CARHR225150 Cardamine hirsuta HOM05D007268 ORTHO05D009152 2.7e-42 175.3 111 74.8
Manes.17G072200 Manihot esculenta HOM05D007268 ORTHO05D009152 3.6e-42 174.9 114 78.1
Cfa000925 Carpinus fangiana HOM05D007268 ORTHO05D009152 6.1e-42 174.1 111 81.1
Thhalv10026609m.g Eutrema salsugineum HOM05D007268 ORTHO05D009152 1.0e-41 173.3 111 74.8
AL7G36000 Arabidopsis lyrata HOM05D007268 ORTHO05D009152 2.3e-41 172.2 111 74.8
Sp7g15690 Schrenkiella parvula HOM05D007268 ORTHO05D009152 2.3e-41 172.2 111 74.8
Carub.0007s2291 Capsella rubella HOM05D007268 ORTHO05D009152 3.9e-41 171.4 111 74.8
Gohir.A10G042300 Gossypium hirsutum HOM05D007268 ORTHO05D009152 3.9e-41 171.4 111 75.7
Gorai.011G045800 Gossypium raimondii HOM05D007268 ORTHO05D009152 3.9e-41 171.4 111 75.7
Eucgr.E02425 Eucalyptus grandis HOM05D007268 ORTHO05D009152 6.7e-41 170.6 113 77.9
Lalb_Chr18g0055321 Lupinus albus HOM05D007268 ORTHO05D009152 6.7e-41 170.6 147 62.6
Thecc.06G148000 Theobroma cacao HOM05D007268 ORTHO05D009152 8.7e-41 170.2 111 77.5
Duzib235G0597 Durio zibethinus HOM05D007268 ORTHO05D009152 1.1e-40 169.9 111 76.6
Gohir.D10G043200 Gossypium hirsutum HOM05D007268 ORTHO05D009152 1.1e-40 169.9 111 74.8
Duzib160G0929 Durio zibethinus HOM05D007268 ORTHO05D009152 1.5e-40 169.5 111 77.5
Potri.015G138100 Populus trichocarpa HOM05D007268 ORTHO05D009152 1.9e-40 169.1 94 85.1
THA.LOC104798395 Tarenaya hassleriana HOM05D007268 ORTHO05D009152 1.9e-40 169.1 115 76.5
PGR031G1097 Punica granatum HOM05D007268 ORTHO05D009152 2.5e-40 168.7 111 75.7
BcaC06g30591 Brassica carinata HOM05D007268 ORTHO05D009152 3.3e-40 168.3 110 70.9
Glyma.13G219500 Glycine max HOM05D007268 ORTHO05D009152 3.3e-40 168.3 105 80.0
Sed0026056 Sechium edule HOM05D007268 ORTHO05D009152 3.3e-40 168.3 113 73.5
BcaC06g30594 Brassica carinata HOM05D007268 ORTHO05D009152 4.3e-40 167.9 109 72.5
BcaNung00009 Brassica carinata HOM05D007268 ORTHO05D009152 4.3e-40 167.9 109 72.5
BcaNung02699 Brassica carinata HOM05D007268 ORTHO05D009152 5.7e-40 167.5 112 72.3
C07p49660 Brassica napus HOM05D007268 ORTHO05D009152 5.7e-40 167.5 112 72.3
BolC7t45467H Brassica oleracea HOM05D007268 ORTHO05D009152 5.7e-40 167.5 112 72.3
MBI02_g20985_MAGBIO Magnolia biondii HOM05D007268 ORTHO05D009152 5.7e-40 167.5 95 81.1
MD05G1281500 Malus domestica HOM05D007268 ORTHO05D009152 5.7e-40 167.5 108 75.9
Sabra15G0149200 Salix brachista HOM05D007268 ORTHO05D009152 5.7e-40 167.5 107 78.5
A01p10290 Brassica napus HOM05D007268 ORTHO05D009152 7.4e-40 167.2 112 74.1
BraA01t00976Z Brassica rapa HOM05D007268 ORTHO05D009152 7.4e-40 167.2 112 74.1
BcaC09g51527 Brassica carinata HOM05D007268 ORTHO05D009152 1.3e-39 166.4 101 78.2
Ciclev10017240m.g Citrus clementina HOM05D007268 ORTHO05D009152 1.7e-39 166.0 110 74.5
A03p51230 Brassica napus HOM05D007268 ORTHO05D009152 2.2e-39 165.6 110 71.8
CiPaw.09G121900 Carya illinoinensis HOM05D007268 ORTHO05D009152 3.7e-39 164.9 110 73.6
TWI53G0467 Tripterygium wilfordii HOM05D007268 ORTHO05D009152 3.7e-39 164.9 111 77.5
Aa31LG6G1080 Aethionema arabicum HOM05D007268 ORTHO05D009152 4.8e-39 164.5 116 69.0
BraA03t14206Z Brassica rapa HOM05D007268 ORTHO05D009152 6.3e-39 164.1 110 70.9
Prupe.4G083100 Prunus persica HOM05D007268 ORTHO05D009152 8.2e-39 163.7 114 74.6
C01p12240 Brassica napus HOM05D007268 ORTHO05D009152 1.1e-38 163.3 88 85.2
BolC1t01200H Brassica oleracea HOM05D007268 ORTHO05D009152 1.1e-38 163.3 88 85.2
ClCG03G006700 Citrullus lanatus HOM05D007268 ORTHO05D009152 1.4e-38 162.9 113 73.5
CsaV3_1G004630 Cucumis sativus L. HOM05D007268 ORTHO05D009152 1.4e-38 162.9 113 72.6
RcHm_v2.0_Chr5g0014441 Rosa chinensis HOM05D007268 ORTHO05D009152 1.4e-38 162.9 121 70.2
QL05p055849 Quercus lobata HOM05D007268 ORTHO05D009152 1.8e-38 162.5 113 74.3
Rhsim13G0115400 Rhododendron simsii HOM05D007268 ORTHO05D009152 1.8e-38 162.5 100 76.0
Dinv32234 Davidia involucrata HOM05D007268 ORTHO05D009152 2.4e-38 162.2 96 79.2
vmacro03337 Vaccinium macrocarpon HOM05D007268 ORTHO05D009152 2.4e-38 162.2 100 75.0
Atru.chr10.1171 Acer truncatum HOM05D007268 ORTHO05D009152 4.1e-38 161.4 113 72.6
CSS0021934 Camellia sinensis var. sinensis HOM05D007268 ORTHO05D009152 4.1e-38 161.4 113 74.3
Phvul.006G166200 Phaseolus vulgaris HOM05D007268 ORTHO05D009152 5.3e-38 161.0 110 73.6
Aqoxy4G02868 Aquilegia oxysepala HOM05D007268 ORTHO05D009152 9.1e-38 160.2 106 70.8
Nn3g20236 Nelumbo nucifera HOM05D007268 ORTHO05D009152 1.5e-37 159.5 96 77.1
CSS0030281 Camellia sinensis var. sinensis HOM05D007268 ORTHO05D009152 2.0e-37 159.1 113 72.6
FvH4_3g05282 Fragaria vesca HOM05D007268 ORTHO05D009152 2.0e-37 159.1 120 69.2
Oeu030940.1 Olea europaea HOM05D007268 ORTHO05D009152 2.0e-37 159.1 108 70.4
Lsat_1_v5_gn_7_27661 Lactuca sativa HOM05D007268 ORTHO05D009152 2.6e-37 158.7 111 68.5
CiPaw.10G090400 Carya illinoinensis HOM05D007268 ORTHO05D009152 3.4e-37 158.3 110 70.9
Solyc08g048540.2 Solanum lycopersicum HOM05D007268 ORTHO05D009152 3.4e-37 158.3 94 78.7
Sopen08g010950 Solanum pennellii HOM05D007268 ORTHO05D009152 3.4e-37 158.3 94 78.7
Actinidia32339 Actinidia chinensis HOM05D007268 ORTHO05D009152 1.0e-36 156.8 114 71.9
Hund21552 Selenicereus undatus HOM05D007268 ORTHO05D009152 1.0e-36 156.8 93 75.3
Atru.chr4.1816 Acer truncatum HOM05D007268 ORTHO05D009152 1.7e-36 156.0 113 71.7
Ah.04g158630 Amaranthus hybridus HOM05D007268 ORTHO05D009152 2.9e-36 155.2 95 74.7
CAN.G42.16 Capsicum annuum HOM05D007268 ORTHO05D009152 3.8e-36 154.8 94 75.5
PGSC0003DMG400029871 Solanum tuberosum HOM05D007268 ORTHO05D009152 3.8e-36 154.8 94 77.7
SGA_v2.0_scaffold1G00193 Striga asiatica HOM05D007268 ORTHO05D009152 6.5e-36 154.1 94 74.5
DCAR_003898 Daucus carota HOM05D007268 ORTHO05D009152 8.5e-36 153.7 108 65.7
ECA236G4633 Erigeron canadensis HOM05D007268 ORTHO05D009152 1.4e-35 152.9 100 69.0
Sc24g0001710 Simmondsia chinensis HOM05D007268 ORTHO05D009152 3.2e-35 151.8 92 75.0
AUR62006739 Chenopodium quinoa HOM05D007268 ORTHO05D009152 4.2e-35 151.4 96 71.9
FAN25G0109 Fragaria x ananassa HOM05D007268 ORTHO05D009152 4.2e-35 151.4 120 65.0
CAN.G500.67 Capsicum annuum HOM05D007268 ORTHO05D009152 5.5e-35 151.0 95 74.7
Migut.M00895 Erythranthe guttata HOM05D007268 ORTHO05D009152 5.5e-35 151.0 101 68.3
unitig_92.g28163 Utricularia gibba HOM05D007268 ORTHO05D009152 5.5e-35 151.0 114 64.0
CANSAT21G2169 Cannabis sativa HOM05D007268 ORTHO05D009152 3.6e-34 148.3 110 64.5
MSTRG.7499 Avicennia marina HOM05D007268 ORTHO05D009152 7.9e-34 147.1 103 68.0
GSVIVG01035542001 Vitis vinifera HOM05D007268 ORTHO05D009152 7.9e-34 147.1 76 88.2
PSO541G1787 Papaver somniferum HOM05D007268 ORTHO05D009152 5.1e-33 144.4 99 72.7
HanXRQChr04g0115721 Helianthus annuus HOM05D007268 ORTHO05D009152 2.0e-32 142.5 77 84.4
MBI02_g43299_MAGBIO Magnolia biondii HOM05D007268 ORTHO05D009152 4.4e-32 141.4 76 82.9
SalBow8G1886 Salvia bowleyana HOM05D007268 ORTHO05D009152 5.7e-32 141.0 76 84.2
unitig_37.g12097 Utricularia gibba HOM05D007268 ORTHO05D009152 5.7e-32 141.0 114 61.4
ATR0618G449 Amborella trichopoda HOM05D007268 ORTHO05D009152 1.8e-30 136.0 90 66.7
FAN16G0810 Fragaria x ananassa HOM05D007268 ORTHO05D009152 1.8e-30 136.0 107 68.2
Zm00001eb273860 Zea mays HOM05D007268 ORTHO05D009152 2.4e-30 135.6 90 68.9
Solyc08g048520.1 Solanum lycopersicum HOM05D007268 ORTHO05D009152 5.3e-30 134.4 95 66.3
arahy.Tifrunner.gnm1.ann1.H0S66A Arachis hypogaea HOM05D007268 ORTHO05D009152 1.2e-29 133.3 86 76.7
Zm00001eb224700 Zea mays HOM05D007268 ORTHO05D009152 2.0e-29 132.5 94 64.9
Os06g0677600 Oryza sativa ssp. japonica HOM05D007268 ORTHO05D009152 4.5e-29 131.3 96 64.6
Cc09_g08780 Coffea canephora HOM05D007268 ORTHO05D009152 1.0e-28 130.2 76 78.9
EL10Ac4g09469 Beta vulgaris HOM05D007268 ORTHO05D009152 1.7e-28 129.4 78 74.4
HPP92_004157 Vanilla planifolia HOM05D007268 ORTHO05D009152 5.0e-28 127.9 73 78.1
FAN21G3321 Fragaria x ananassa HOM05D007268 ORTHO05D009152 6.5e-28 127.5 101 68.3
Pp3c2_29020 Physcomitrium patens HOM05D007268 ORTHO05D009152 1.7e-23 112.8 97 51.5
SEGI_36221 Sequoiadendron giganteum HOM05D007268 ORTHO05D009152 1.8e-22 109.4 95 55.8
Mapoly0012s0147 Marchantia polymorpha HOM05D007268 ORTHO05D009152 7.0e-22 107.5 106 49.1
SMO358G0115 Selaginella moellendorffii HOM05D007268 ORTHO05D009152 3.5e-21 105.1 102 49.0
Nitab4.5_0005488g0010 Nicotiana tabacum HOM05D007268 ORTHO05D009152 1.6e-18 96.3 108 51.9
SHI24845 Sapria himalayana HOM05D007268 ORTHO05D009152 5.2e-17 91.3 76 53.9
CBR_g29441 Chara braunii HOM05D007268 ORTHO05D009152 2.4e-14 82.4 133 36.1
PRCOL_00005812 Prasinoderma coloniale HOM05D007268 ORTHO05D009152 9.4e-11 70.5 89 42.7


User provided reference genes

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