Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_00516_v3 Cicer arietinum L. HOM05D007486 ORTHO05D003673 2.6e-25 119.4 167 100.0
Medtr2g018820 Medicago truncatula HOM05D007486 ORTHO05D003673 2.0e-17 93.2 167 70.7
Dinv28833 Davidia involucrata HOM05D007486 ORTHO05D003673 1.3e-16 90.5 45 93.3
Lj6g0012572 Lotus japonicus HOM05D007486 ORTHO05D003673 1.7e-16 90.1 45 93.3
CiPaw.13G051500 Carya illinoinensis HOM05D007486 ORTHO05D003673 2.2e-16 89.7 45 93.3
Phvul.006G167600 Phaseolus vulgaris HOM05D007486 ORTHO05D003673 2.2e-16 89.7 45 93.3
CANSAT01G2277 Cannabis sativa HOM05D007486 ORTHO05D003673 5.0e-16 88.6 45 93.3
CANSAT01G2464 Cannabis sativa HOM05D007486 ORTHO05D003673 5.0e-16 88.6 45 93.3
VMungo0540G1511 Vigna mungo HOM05D007486 ORTHO05D003673 6.5e-16 88.2 45 88.9
TWI18G0642 Tripterygium wilfordii HOM05D007486 ORTHO05D003673 8.5e-16 87.8 44 88.6
Actinidia23773 Actinidia chinensis HOM05D007486 ORTHO05D003673 1.1e-15 87.4 44 90.9
Psat1g191400 Pisum sativum HOM05D007486 ORTHO05D003673 1.1e-15 87.4 44 93.2
Potri.002G248100 Populus trichocarpa HOM05D007486 ORTHO05D003673 1.1e-15 87.4 45 88.9
Sabra02G0188800 Salix brachista HOM05D007486 ORTHO05D003673 1.1e-15 87.4 45 88.9
MELO3C022733.2 Cucumis melo HOM05D007486 ORTHO05D003673 2.5e-15 86.3 45 86.7
CsaV3_3G030190 Cucumis sativus L. HOM05D007486 ORTHO05D003673 2.5e-15 86.3 45 86.7
Cpa.g.sc8.109 Carica papaya HOM05D007486 ORTHO05D003673 3.2e-15 85.9 45 86.7
Lalb_Chr20g0117691 Lupinus albus HOM05D007486 ORTHO05D003673 7.2e-15 84.7 45 86.7
Gorai.001G103500 Gossypium raimondii HOM05D007486 ORTHO05D003673 9.4e-15 84.3 45 84.4
ClCG09G011490 Citrullus lanatus HOM05D007486 ORTHO05D003673 1.2e-14 84.0 42 92.9
RcHm_v2.0_Chr5g0046411 Rosa chinensis HOM05D007486 ORTHO05D003673 2.7e-14 82.8 42 90.5
Haze_19599 Corylus avellana HOM05D007486 ORTHO05D003673 6.1e-14 81.6 42 90.5
Rhsim01G0250000 Rhododendron simsii HOM05D007486 ORTHO05D003673 8.0e-14 81.3 41 90.2
A07p07090 Brassica napus HOM05D007486 ORTHO05D003673 1.0e-13 80.9 45 82.2
Glyma.13G220800 Glycine max HOM05D007486 ORTHO05D003673 1.0e-13 80.9 41 90.2
COL.COLO4_19319 Corchorus olitorius HOM05D007486 ORTHO05D003673 1.4e-13 80.5 45 84.4
MD05G1166500 Malus domestica HOM05D007486 ORTHO05D003673 1.8e-13 80.1 44 79.5
GSVIVG01009330001 Vitis vinifera HOM05D007486 ORTHO05D003673 1.8e-13 80.1 41 90.2
SalBow3G3646 Salvia bowleyana HOM05D007486 ORTHO05D003673 4.0e-13 79.0 41 87.8
AUR62001160 Chenopodium quinoa HOM05D007486 ORTHO05D003673 5.2e-13 78.6 42 81.0
MSTRG.12763 Avicennia marina HOM05D007486 ORTHO05D003673 8.8e-13 77.8 39 94.9
Glyma.15G091700 Glycine max HOM05D007486 ORTHO05D003673 1.2e-12 77.4 40 90.0
Gohir.A07G091500 Gossypium hirsutum HOM05D007486 ORTHO05D003673 1.5e-12 77.0 40 85.0
Thhalv10002564m.g Eutrema salsugineum HOM05D007486 ORTHO05D003673 2.0e-12 76.6 42 85.7
PSO017G6569 Papaver somniferum HOM05D007486 ORTHO05D003673 2.0e-12 76.6 44 77.3
Os06g0184866 Oryza sativa ssp. japonica HOM05D007486 ORTHO05D003673 2.6e-12 76.3 44 72.7
Sed0025116 Sechium edule HOM05D007486 ORTHO05D003673 3.3e-12 75.9 39 89.7
CARHR101560 Cardamine hirsuta HOM05D007486 ORTHO05D003673 4.4e-12 75.5 42 83.3
Cc01_g16440 Coffea canephora HOM05D007486 ORTHO05D003673 4.4e-12 75.5 39 89.7
arahy.Tifrunner.gnm1.ann1.3Y6RAV Arachis hypogaea HOM05D007486 ORTHO05D003673 5.7e-12 75.1 36 94.4
Lj3A22G11 Lonicera japonica HOM05D007486 ORTHO05D003673 7.5e-12 74.7 39 89.7
TAR625G0208 Trochodendron aralioides HOM05D007486 ORTHO05D003673 7.5e-12 74.7 39 87.2
BcaB06g26711 Brassica carinata HOM05D007486 ORTHO05D003673 9.7e-12 74.3 40 85.0
CSS0040920 Camellia sinensis var. sinensis HOM05D007486 ORTHO05D003673 1.3e-11 73.9 39 87.2
Cfa016598 Carpinus fangiana HOM05D007486 ORTHO05D003673 1.3e-11 73.9 39 89.7
Aa31sc18G110 Aethionema arabicum HOM05D007486 ORTHO05D003673 1.7e-11 73.6 42 78.6
AUR62022161 Chenopodium quinoa HOM05D007486 ORTHO05D003673 1.7e-11 73.6 40 80.0
PGR083G0899 Punica granatum HOM05D007486 ORTHO05D003673 1.7e-11 73.6 39 87.2
THA.LOC104804636 Tarenaya hassleriana HOM05D007486 ORTHO05D003673 1.7e-11 73.6 39 89.7
Carub.0003s2558 Capsella rubella HOM05D007486 ORTHO05D003673 2.2e-11 73.2 40 82.5
Duzib133G0357 Durio zibethinus HOM05D007486 ORTHO05D003673 2.2e-11 73.2 42 78.6
Lj2P1121T80 Lonicera japonica HOM05D007486 ORTHO05D003673 2.2e-11 73.2 39 87.2
BcaC06g35800 Brassica carinata HOM05D007486 ORTHO05D003673 2.8e-11 72.8 40 82.5
C07p10710 Brassica napus HOM05D007486 ORTHO05D003673 2.8e-11 72.8 40 82.5
BolC7t41537H Brassica oleracea HOM05D007486 ORTHO05D003673 2.8e-11 72.8 40 82.5
BraA07t28496Z Brassica rapa HOM05D007486 ORTHO05D003673 2.8e-11 72.8 40 82.5
Ciclev10031787m.g Citrus clementina HOM05D007486 ORTHO05D003673 2.8e-11 72.8 40 82.5
Oeu003624.1 Olea europaea HOM05D007486 ORTHO05D003673 2.8e-11 72.8 38 92.1
QL09p049342 Quercus lobata HOM05D007486 ORTHO05D003673 2.8e-11 72.8 38 89.5
Sp3g22830 Schrenkiella parvula HOM05D007486 ORTHO05D003673 2.8e-11 72.8 39 87.2
Thecc.01G215400 Theobroma cacao HOM05D007486 ORTHO05D003673 2.8e-11 72.8 39 87.2
DCAR_008418 Daucus carota HOM05D007486 ORTHO05D003673 3.7e-11 72.4 39 84.6
MBI15_g18240_MAGBIO Magnolia biondii HOM05D007486 ORTHO05D003673 3.7e-11 72.4 38 86.8
Migut.N00643 Erythranthe guttata HOM05D007486 ORTHO05D003673 4.8e-11 72.0 39 87.2
FAN21G3323 Fragaria x ananassa HOM05D007486 ORTHO05D003673 4.8e-11 72.0 39 84.6
Lsat_1_v5_gn_8_89041 Lactuca sativa HOM05D007486 ORTHO05D003673 4.8e-11 72.0 44 75.0
FvH4_3g25580 Fragaria vesca HOM05D007486 ORTHO05D003673 6.3e-11 71.6 38 86.8
FAN11G1759 Fragaria x ananassa HOM05D007486 ORTHO05D003673 6.3e-11 71.6 38 86.8
Manes.13G051900 Manihot esculenta HOM05D007486 ORTHO05D003673 6.3e-11 71.6 39 87.2
CDE08G0620 Ceratophyllum demersum HOM05D007486 ORTHO05D003673 8.2e-11 71.2 38 86.8
FAN16G1502 Fragaria x ananassa HOM05D007486 ORTHO05D003673 1.1e-10 70.9 38 86.8
EL10Ac7g17952 Beta vulgaris HOM05D007486 ORTHO05D003673 1.4e-10 70.5 39 79.5
HanXRQChr06g0172221 Helianthus annuus HOM05D007486 ORTHO05D003673 1.4e-10 70.5 44 68.2
MD10G1156500 Malus domestica HOM05D007486 ORTHO05D003673 1.4e-10 70.5 39 82.1
Atru.chr6.1455 Acer truncatum HOM05D007486 ORTHO05D003673 1.8e-10 70.1 39 82.1
Prupe.8G194300 Prunus persica HOM05D007486 ORTHO05D003673 1.8e-10 70.1 39 82.1
Eucgr.H00752 Eucalyptus grandis HOM05D007486 ORTHO05D003673 2.4e-10 69.7 38 86.8
HPP92_000898 Vanilla planifolia HOM05D007486 ORTHO05D003673 2.4e-10 69.7 44 68.2
AL3G41110 Arabidopsis lyrata HOM05D007486 ORTHO05D003673 3.1e-10 69.3 38 84.2
AT3G25210 Arabidopsis thaliana HOM05D007486 ORTHO05D003673 3.1e-10 69.3 38 84.2
FAN25G2586 Fragaria x ananassa HOM05D007486 ORTHO05D003673 5.3e-10 68.6 38 81.6
Gohir.D07G096200 Gossypium hirsutum HOM05D007486 ORTHO05D003673 9.1e-10 67.8 39 79.5
Nitab4.5_0003020g0090 Nicotiana tabacum HOM05D007486 ORTHO05D003673 1.6e-09 67.0 37 83.8
Nitab4.5_0019111g0010 Nicotiana tabacum HOM05D007486 ORTHO05D003673 1.6e-09 67.0 37 83.8
Peaxi162Scf01312g00009 Petunia axillaris HOM05D003330 ORTHO05D003805 1.6e-09 67.0 37 83.8
Solyc06g083200.3 Solanum lycopersicum HOM05D007486 ORTHO05D003673 1.6e-09 67.0 37 83.8
Sopen06g034590 Solanum pennellii HOM05D007486 ORTHO05D003673 1.6e-09 67.0 37 83.8
PGSC0003DMG402020106 Solanum tuberosum HOM05D007486 ORTHO05D003673 1.6e-09 67.0 37 83.8
CAN.G874.18 Capsicum annuum HOM05D007486 ORTHO05D003673 3.5e-09 65.9 36 86.1
ECA236G4950 Erigeron canadensis HOM05D007486 ORTHO05D003673 3.5e-09 65.9 44 70.5
Aqoxy7G03388 Aquilegia oxysepala HOM05D007486 ORTHO05D003673 7.7e-09 64.7 37 81.1
ATR0665G439 Amborella trichopoda HOM05D007486 ORTHO05D003673 3.8e-08 62.4 33 78.8
Zm00001eb374560 Zea mays HOM05D007486 ORTHO05D003673 2.1e-06 56.6 32 71.9
Sc17g0001920 Simmondsia chinensis HOM05D007486 ORTHO05D003673 3.6e-06 55.8 33 72.7


User provided reference genes

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