Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_00511_v3 Cicer arietinum L. HOM05D007799 ORTHO05D009854 3.1e-142 508.4 257 100.0
Medtr2g018670 Medicago truncatula HOM05D007799 ORTHO05D009854 5.5e-115 417.9 237 86.1
Glyma.15G090500 Glycine max HOM05D007799 ORTHO05D009854 2.7e-109 399.1 242 80.6
Psat1g192080 Pisum sativum HOM05D007799 ORTHO05D009854 2.7e-109 399.1 243 82.3
Glyma.13G221700 Glycine max HOM05D007799 ORTHO05D009854 5.0e-108 394.8 242 79.8
TPR.G26257 Trifolium pratense HOM05D007799 ORTHO05D009854 5.0e-108 394.8 239 82.4
Lalb_Chr20g0117681 Lupinus albus HOM05D007799 ORTHO05D009854 8.8e-105 384.0 256 75.4
Lj6g0006831 Lotus japonicus HOM05D007799 ORTHO05D009854 1.7e-103 379.8 238 78.2
VMungo0540G2150 Vigna mungo HOM05D007799 ORTHO05D009854 1.2e-101 373.6 243 75.7
Lalb_Chr15g0086631 Lupinus albus HOM05D007799 ORTHO05D009854 8.3e-95 350.9 240 75.0
Glyma.05G143400 Glycine max HOM05D007799 ORTHO05D009854 1.2e-93 347.1 245 69.4
Glyma.08G099800 Glycine max HOM05D007799 ORTHO05D009854 6.6e-92 341.3 245 69.4
arahy.Tifrunner.gnm1.ann1.NZ6SRJ Arachis hypogaea HOM05D007799 ORTHO05D009854 6.2e-90 334.7 241 71.0
arahy.Tifrunner.gnm1.ann1.80ML42 Arachis hypogaea HOM05D007799 ORTHO05D009854 8.0e-90 334.3 235 72.3
Phvul.002G177900 Phaseolus vulgaris HOM05D007799 ORTHO05D009854 4.1e-86 322.0 237 67.5
VMungo0251G0945 Vigna mungo HOM05D007799 ORTHO05D009854 7.0e-86 321.2 237 67.1
Duzib192G0648 Durio zibethinus HOM05D007799 ORTHO05D009854 1.9e-83 313.2 242 64.0
Lalb_Chr13g0294011 Lupinus albus HOM05D007799 ORTHO05D009854 2.5e-83 312.8 244 63.5
Manes.15G125000 Manihot esculenta HOM05D007799 ORTHO05D009854 2.5e-83 312.8 253 61.7
Medtr8g079475 Medicago truncatula HOM05D007799 ORTHO05D009854 7.3e-83 311.2 240 65.0
arahy.Tifrunner.gnm1.ann1.GW4I6G Arachis hypogaea HOM05D002205 ORTHO05D004847 2.8e-82 309.3 243 65.0
arahy.Tifrunner.gnm1.ann1.W0WEAA Arachis hypogaea HOM05D007799 ORTHO05D009854 2.8e-82 309.3 243 64.6
QL05p055084 Quercus lobata HOM05D007799 ORTHO05D009854 3.6e-82 308.9 245 61.6
Thecc.06G144300 Theobroma cacao HOM05D007799 ORTHO05D009854 8.1e-82 307.8 242 62.4
CiPaw.10G088800 Carya illinoinensis HOM05D007799 ORTHO05D009854 1.4e-78 297.0 244 60.7
COL.COLO4_31009 Corchorus olitorius HOM05D007799 ORTHO05D009854 4.1e-78 295.4 221 64.7
Duzib235G1165 Durio zibethinus HOM05D007799 ORTHO05D009854 3.5e-77 292.4 240 60.0
Cfa000897 Carpinus fangiana HOM05D007799 ORTHO05D009854 7.8e-77 291.2 240 57.9
CiPaw.09G119600 Carya illinoinensis HOM05D007799 ORTHO05D009854 5.1e-76 288.5 239 59.4
Prupe.4G085700 Prunus persica HOM05D007799 ORTHO05D009854 6.6e-76 288.1 255 57.3
Eucgr.D00266 Eucalyptus grandis HOM05D007799 ORTHO05D009854 1.1e-75 287.3 246 59.8
RcHm_v2.0_Chr5g0014941 Rosa chinensis HOM05D007799 ORTHO05D009854 1.2e-74 283.9 234 58.5
Phvul.006G168136 Phaseolus vulgaris HOM05D007799 ORTHO05D009854 2.1e-74 283.1 185 76.8
Atru.chr10.1081 Acer truncatum HOM05D007799 ORTHO05D009854 8.1e-74 281.2 217 62.7
MD10G1258100 Malus domestica HOM05D007799 ORTHO05D009854 3.1e-73 279.3 243 56.8
CANSAT35G1982 Cannabis sativa HOM05D007799 ORTHO05D009854 5.2e-73 278.5 257 56.4
Ciclev10016395m.g Citrus clementina HOM05D007799 ORTHO05D009854 6.8e-73 278.1 217 61.8
Gorai.010G237400 Gossypium raimondii HOM05D007799 ORTHO05D009854 3.4e-72 275.8 216 61.6
Gohir.A06G196000 Gossypium hirsutum HOM05D007799 ORTHO05D009854 5.8e-72 275.0 216 61.6
FvH4_3g05030 Fragaria vesca HOM05D007799 ORTHO05D009854 7.6e-72 274.6 234 56.0
FAN16G3425 Fragaria x ananassa HOM05D007799 ORTHO05D009854 7.6e-72 274.6 234 55.6
FAN11G0145 Fragaria x ananassa HOM05D007799 ORTHO05D009854 9.9e-72 274.2 234 55.6
FAN25G3832 Fragaria x ananassa HOM05D007799 ORTHO05D009854 1.3e-71 273.9 234 56.0
PGR083G2472 Punica granatum HOM05D007799 ORTHO05D009854 1.3e-71 273.9 253 54.2
MD05G1279400 Malus domestica HOM05D007799 ORTHO05D009854 6.4e-71 271.6 254 53.5
FAN21G3556 Fragaria x ananassa HOM05D007799 ORTHO05D009854 1.4e-70 270.4 234 55.6
Gohir.D06G203500 Gossypium hirsutum HOM05D007799 ORTHO05D009854 3.2e-70 269.2 211 61.1
Peaxi162Scf00045g02414 Petunia axillaris HOM05D007799 ORTHO05D009854 3.2e-70 269.2 239 57.7
Potri.011G081701 Populus trichocarpa HOM05D007799 ORTHO05D009854 5.4e-70 268.5 224 59.4
Nitab4.5_0005655g0010 Nicotiana tabacum HOM05D007799 ORTHO05D009854 6.0e-69 265.0 240 55.8
Oeu032721.1 Olea europaea HOM05D007799 ORTHO05D009854 6.6e-68 261.5 222 57.7
CSS0034958 Camellia sinensis var. sinensis HOM05D007799 ORTHO05D009854 1.5e-67 260.4 225 56.0
Cc00_g02020 Coffea canephora HOM05D007799 ORTHO05D009854 1.5e-67 260.4 255 51.8
Rhsim13G0117700 Rhododendron simsii HOM05D007799 ORTHO05D009854 1.5e-67 260.4 223 57.4
CSS0035706 Camellia sinensis var. sinensis HOM05D007799 ORTHO05D009854 1.6e-66 256.9 225 55.6
PGSC0003DMG400002292 Solanum tuberosum HOM05D007799 ORTHO05D009854 2.1e-66 256.5 239 52.7
Haze_05684 Corylus avellana HOM05D007799 ORTHO05D009854 3.6e-66 255.8 240 54.2
Migut.K01168 Erythranthe guttata HOM05D007799 ORTHO05D009854 8.9e-65 251.1 208 55.3
MBI18_g11218_MAGBIO Magnolia biondii HOM05D007799 ORTHO05D009854 1.5e-64 250.4 238 49.2
GSVIVG01021549001 Vitis vinifera HOM05D007799 ORTHO05D009854 1.3e-63 247.3 222 54.5
Oeu031191.1 Olea europaea HOM05D007799 ORTHO05D009854 4.2e-62 242.3 217 55.8
SalBow8G4130 Salvia bowleyana HOM05D007799 ORTHO05D009854 2.7e-61 239.6 228 50.4
TPR.G9572 Trifolium pratense HOM05D007799 ORTHO05D009854 4.6e-61 238.8 187 63.6
ClCG03G006490 Citrullus lanatus HOM05D007799 ORTHO05D009854 1.3e-60 237.3 238 52.1
CsaV3_1G036880 Cucumis sativus L. HOM05D007799 ORTHO05D009854 3.0e-60 236.1 239 50.6
MBI02_g12199_MAGBIO Magnolia biondii HOM05D007799 ORTHO05D009854 3.0e-60 236.1 235 47.7
DCAR_003890 Daucus carota HOM05D007799 ORTHO05D009854 3.9e-60 235.7 254 47.2
Nitab4.5_0000315g0030 Nicotiana tabacum HOM05D007799 ORTHO05D009854 1.9e-59 233.4 240 51.7
Lsat_1_v5_gn_7_27461 Lactuca sativa HOM05D007799 ORTHO05D009854 1.4e-57 227.3 239 49.8
HanXRQChr15g0482011 Helianthus annuus HOM05D007799 ORTHO05D009854 4.0e-57 225.7 237 48.9
vmacro03431 Vaccinium macrocarpon HOM05D007799 ORTHO05D009854 2.4e-54 216.5 243 48.6
Nn3g20329 Nelumbo nucifera HOM05D007799 ORTHO05D009854 4.2e-54 215.7 237 49.8
Actinidia32344 Actinidia chinensis HOM05D007799 ORTHO05D009854 7.1e-54 214.9 191 56.0
Sed0012400 Sechium edule HOM05D007799 ORTHO05D009854 7.1e-54 214.9 214 51.9
ECA236G2997 Erigeron canadensis HOM05D007799 ORTHO05D009854 9.3e-54 214.5 220 49.5
HPP92_026553 Vanilla planifolia HOM05D007799 ORTHO05D009854 1.0e-52 211.1 237 42.6
HanXRQChr04g0116571 Helianthus annuus HOM05D007799 ORTHO05D009854 6.7e-52 208.4 236 46.6
Dinv32213 Davidia involucrata HOM05D007799 ORTHO05D009854 4.8e-50 202.2 174 59.8
CDE12G0863 Ceratophyllum demersum HOM05D007799 ORTHO05D009854 6.4e-47 191.8 233 43.8
TAR624G0778 Trochodendron aralioides HOM05D007799 ORTHO05D009854 6.4e-47 191.8 159 60.4
HPP92_028169 Vanilla planifolia HOM05D007799 ORTHO05D009854 2.4e-46 189.9 227 40.5
ATR1098G006 Amborella trichopoda HOM05D007799 ORTHO05D009854 4.2e-46 189.1 229 41.5
DCAR_007872 Daucus carota HOM05D007799 ORTHO05D009854 1.1e-43 181.0 239 42.3
Sopen08g008720 Solanum pennellii HOM05D007799 ORTHO05D009854 8.2e-34 148.3 160 45.0
MELO3C035703.2 Cucumis melo HOM05D007799 ORTHO05D009854 2.0e-32 143.7 174 44.8
Solyc08g023510.3 Solanum lycopersicum HOM05D007799 ORTHO05D009854 2.0e-32 143.7 153 45.1
Lj1C1169G11 Lonicera japonica HOM05D002205 ORTHO05D004847 2.4e-25 120.2 96 60.4
TPR.G18987 Trifolium pratense HOM05D007799 ORTHO05D009854 2.6e-24 116.7 80 68.8
HPP92_026526 Vanilla planifolia HOM05D007799 ORTHO05D009854 1.8e-20 104.0 106 44.3
SEGI_29226 Sequoiadendron giganteum HOM05D007799 ORTHO05D009854 6.9e-17 92.0 171 32.2


User provided reference genes

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