Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_00430_v3 Cicer arietinum L. HOM05D000652 ORTHO05D000486 6.0e-49 197.2 100 100.0
TPR.G11700 Trifolium pratense HOM05D000652 ORTHO05D000486 8.4e-35 150.2 98 77.6
Medtr2g015890 Medicago truncatula HOM05D000652 ORTHO05D000486 1.9e-31 139.0 99 74.7
Psat1g198840 Pisum sativum HOM05D000652 ORTHO05D000486 5.3e-29 131.0 100 69.0
Glyma.07G205800 Glycine max HOM05D000652 ORTHO05D000486 3.8e-19 98.2 97 59.8
VMungo0251G0627 Vigna mungo HOM05D000652 ORTHO05D000486 1.8e-16 89.4 99 57.6
FAN11G2301 Fragaria x ananassa HOM05D000652 ORTHO05D000486 5.6e-15 84.3 97 56.7
CANSAT35G1387 Cannabis sativa HOM05D000652 ORTHO05D000486 9.6e-15 83.6 98 53.1
Cpa.g.sc7.53 Carica papaya HOM05D000652 ORTHO05D000486 9.6e-15 83.6 95 54.7
Phvul.003G058800 Phaseolus vulgaris HOM05D000652 ORTHO05D000486 9.6e-15 83.6 98 55.1
MD10G1281100 Malus domestica HOM05D000652 ORTHO05D000486 1.3e-14 83.2 100 53.0
Ca_27356_v3 Cicer arietinum L. HOM05D000652 ORTHO05D000486 1.6e-14 82.8 84 54.8
FvH4_3g07920 Fragaria vesca HOM05D000652 ORTHO05D000486 1.6e-14 82.8 97 55.7
FAN25G0641 Fragaria x ananassa HOM05D000652 ORTHO05D000486 1.6e-14 82.8 97 55.7
TWI38G1347 Tripterygium wilfordii HOM05D000652 ORTHO05D000486 2.8e-14 82.0 79 58.2
Ciclev10016289m.g Citrus clementina HOM05D000652 ORTHO05D000486 3.7e-14 81.6 79 58.2
FAN21G0348 Fragaria x ananassa HOM05D000652 ORTHO05D000486 3.7e-14 81.6 97 55.7
Glyma.02G139700 Glycine max HOM05D000652 ORTHO05D000486 3.7e-14 81.6 97 53.6
QL05p046581 Quercus lobata HOM05D000652 ORTHO05D000486 3.7e-14 81.6 88 52.3
RcHm_v2.0_Chr5g0010631 Rosa chinensis HOM05D000652 ORTHO05D000486 3.7e-14 81.6 97 52.6
Cfa000601 Carpinus fangiana HOM05D005873 ORTHO05D007582 4.8e-14 81.3 96 49.0
TWI63G0417 Tripterygium wilfordii HOM05D000652 ORTHO05D000486 1.1e-13 80.1 84 58.3
Actinidia07635 Actinidia chinensis HOM05D000652 ORTHO05D000486 1.4e-13 79.7 89 52.8
FAN16G1420 Fragaria x ananassa HOM05D000652 ORTHO05D000486 1.4e-13 79.7 97 54.6
MD05G1302400 Malus domestica HOM05D000652 ORTHO05D000486 1.4e-13 79.7 96 49.0
CiPaw.09G069300 Carya illinoinensis HOM05D000652 ORTHO05D000486 3.1e-13 78.6 96 47.9
Actinidia39501 Actinidia chinensis HOM05D000652 ORTHO05D000486 4.0e-13 78.2 88 52.3
COL.COLO4_31311 Corchorus olitorius HOM05D000652 ORTHO05D000486 9.0e-13 77.0 91 52.7
Manes.17G055000 Manihot esculenta HOM05D000652 ORTHO05D000486 9.0e-13 77.0 76 55.3
Haze_06242 Corylus avellana HOM05D000652 ORTHO05D000486 1.2e-12 76.6 96 50.0
Manes.16G038200 Manihot esculenta HOM05D000652 ORTHO05D000486 1.2e-12 76.6 77 57.1
Medtr4g087920 Medicago truncatula HOM05D000652 ORTHO05D000486 1.2e-12 76.6 84 53.6
PGR042G1431 Punica granatum HOM05D000652 ORTHO05D000486 1.5e-12 76.3 96 47.9
CiPaw.10G058300 Carya illinoinensis HOM05D000652 ORTHO05D000486 2.0e-12 75.9 94 45.7
Thecc.06G171900 Theobroma cacao HOM05D000652 ORTHO05D000486 2.0e-12 75.9 91 49.5
Cc02_g14830 Coffea canephora HOM05D000652 ORTHO05D000486 3.4e-12 75.1 95 48.4
Nn1g09081 Nelumbo nucifera HOM05D000652 ORTHO05D000486 3.4e-12 75.1 97 49.5
Atru.chr10.1678_Atru.chr10.1679 Acer truncatum HOM05D000652 ORTHO05D000486 4.5e-12 74.7 76 56.6
MELO3C002644.2 Cucumis melo HOM05D000652 ORTHO05D000486 4.5e-12 74.7 76 53.9
ClCG03G007780 Citrullus lanatus HOM05D000652 ORTHO05D000486 5.8e-12 74.3 76 53.9
CsaV3_1G033410 Cucumis sativus L. HOM05D000652 ORTHO05D000486 5.8e-12 74.3 76 53.9
CSS0027737 Camellia sinensis var. sinensis HOM05D000652 ORTHO05D000486 7.6e-12 73.9 66 62.1
Sabra04G0036400 Salix brachista HOM05D000652 ORTHO05D000486 7.6e-12 73.9 64 64.1
PSO541G0265 Papaver somniferum HOM05D000652 ORTHO05D000486 1.0e-11 73.6 96 50.0
PSO675G5090 Papaver somniferum HOM05D000652 ORTHO05D000486 1.0e-11 73.6 96 50.0
Potri.004G055700 Populus trichocarpa HOM05D000652 ORTHO05D000486 1.0e-11 73.6 65 63.1
MSTRG.14727 Avicennia marina HOM05D000652 ORTHO05D000486 1.3e-11 73.2 65 60.0
Dinv40667 Davidia involucrata HOM05D000652 ORTHO05D000486 1.3e-11 73.2 100 48.0
Duzib160G0173 Durio zibethinus HOM05D000652 ORTHO05D000486 1.3e-11 73.2 88 48.9
Sabra11G0047300 Salix brachista HOM05D000652 ORTHO05D000486 1.3e-11 73.2 65 61.5
CSS0005453 Camellia sinensis var. sinensis HOM05D000652 ORTHO05D000486 1.7e-11 72.8 98 45.9
Solyc07g053290.3 Solanum lycopersicum HOM05D000652 ORTHO05D000486 1.7e-11 72.8 87 49.4
Sopen07g027250 Solanum pennellii HOM05D000652 ORTHO05D000486 1.7e-11 72.8 87 49.4
Nitab4.5_0009762g0040 Nicotiana tabacum HOM05D000652 ORTHO05D000486 2.2e-11 72.4 66 60.6
CsaV3_6G018830 Cucumis sativus L. HOM05D000652 ORTHO05D000486 2.9e-11 72.0 81 51.9
Lalb_Chr09g0328021 Lupinus albus HOM05D000652 ORTHO05D000486 2.9e-11 72.0 81 53.1
CSS0042214 Camellia sinensis var. sinensis HOM05D000652 ORTHO05D000486 3.8e-11 71.6 66 60.6
Dinv16756 Davidia involucrata HOM05D000652 ORTHO05D000486 3.8e-11 71.6 65 60.0
Gohir.D05G158400 Gossypium hirsutum HOM05D000652 ORTHO05D000486 3.8e-11 71.6 89 50.6
Actinidia16799 Actinidia chinensis HOM05D000652 ORTHO05D000486 4.9e-11 71.2 81 51.9
Eucgr.E02743 Eucalyptus grandis HOM05D000652 ORTHO05D000486 6.5e-11 70.9 88 48.9
PGSC0003DMG400020427 Solanum tuberosum HOM05D000652 ORTHO05D000486 6.5e-11 70.9 87 49.4
TAR627G0737 Trochodendron aralioides HOM05D000652 ORTHO05D000486 6.5e-11 70.9 96 47.9
Dinv04611 Davidia involucrata HOM05D000652 ORTHO05D000486 8.4e-11 70.5 64 59.4
Eucgr.D00509 Eucalyptus grandis HOM05D000652 ORTHO05D000486 8.4e-11 70.5 77 54.5
Hma1.2p1_0987F.1_g244530 Hydrangea macrophylla HOM05D000652 ORTHO05D000486 8.4e-11 70.5 82 56.1
Lj3g0000241 Lotus japonicus HOM05D000652 ORTHO05D000486 8.4e-11 70.5 83 47.0
Nitab4.5_0010797g0030 Nicotiana tabacum HOM05D000652 ORTHO05D000486 8.4e-11 70.5 82 50.0
Actinidia35574 Actinidia chinensis HOM05D000652 ORTHO05D000486 1.1e-10 70.1 65 56.9
MELO3C019758.2 Cucumis melo HOM05D000652 ORTHO05D000486 1.1e-10 70.1 81 50.6
Lalb_Chr16g0384321 Lupinus albus HOM05D000652 ORTHO05D000486 1.1e-10 70.1 77 50.6
Phvul.011G134300 Phaseolus vulgaris HOM05D000652 ORTHO05D000486 1.1e-10 70.1 96 44.8
Rhsim13G0190900 Rhododendron simsii HOM05D000652 ORTHO05D000486 1.1e-10 70.1 84 51.2
Peaxi162Scf00735g00516 Petunia axillaris HOM05D000652 ORTHO05D000486 1.4e-10 69.7 65 61.5
vmacro03930 Vaccinium macrocarpon HOM05D000652 ORTHO05D000486 1.4e-10 69.7 78 56.4
CSS0031313 Camellia sinensis var. sinensis HOM05D000652 ORTHO05D000486 1.9e-10 69.3 83 51.8
Gohir.A04G081400 Gossypium hirsutum HOM05D000652 ORTHO05D000486 1.9e-10 69.3 84 53.6
Gohir.A05G155700 Gossypium hirsutum HOM05D000652 ORTHO05D000486 1.9e-10 69.3 91 48.4
Gohir.A10G031500 Gossypium hirsutum HOM05D000652 ORTHO05D000486 1.9e-10 69.3 84 53.6
Gorai.011G034000 Gossypium raimondii HOM05D000652 ORTHO05D000486 1.9e-10 69.3 84 53.6
CAN.G370.66 Capsicum annuum HOM05D000652 ORTHO05D000486 2.5e-10 68.9 66 59.1
Potri.011G065500 Populus trichocarpa HOM05D000652 ORTHO05D000486 2.5e-10 68.9 65 56.9
Gorai.009G163400 Gossypium raimondii HOM05D000652 ORTHO05D000486 3.2e-10 68.6 89 49.4
Lj8A103T85 Lonicera japonica HOM05D000652 ORTHO05D000486 3.2e-10 68.6 83 48.2
ClCG02G017920 Citrullus lanatus HOM05D000652 ORTHO05D000486 4.2e-10 68.2 81 49.4
Cc05_g08220 Coffea canephora HOM05D000652 ORTHO05D000486 4.2e-10 68.2 83 47.0
Duzib192G0852 Durio zibethinus HOM05D000652 ORTHO05D000486 4.2e-10 68.2 90 48.9
Lj4g0008108 Lotus japonicus HOM05D000652 ORTHO05D000486 4.2e-10 68.2 94 47.9
MSTRG.7401 Avicennia marina HOM05D000652 ORTHO05D000486 5.5e-10 67.8 94 43.6
Gohir.D10G032300 Gossypium hirsutum HOM05D000652 ORTHO05D000486 5.5e-10 67.8 77 55.8
HanXRQChr16g0518881 Helianthus annuus HOM05D000652 ORTHO05D000486 5.5e-10 67.8 85 52.9
Lsat_1_v5_gn_4_49501 Lactuca sativa HOM05D000652 ORTHO05D000486 5.5e-10 67.8 75 57.3
CSS0006854 Camellia sinensis var. sinensis HOM05D000652 ORTHO05D000486 7.1e-10 67.4 86 52.3
Oeu058984.1 Olea europaea HOM05D000652 ORTHO05D000486 7.1e-10 67.4 86 44.2
VMungo1127G1303 Vigna mungo HOM05D000652 ORTHO05D000486 7.1e-10 67.4 96 43.8
Migut.H01448 Erythranthe guttata HOM05D000652 ORTHO05D000486 9.3e-10 67.0 65 58.5
Hma1.2p1_0178F.1_g078960 Hydrangea macrophylla HOM05D000652 ORTHO05D000486 9.3e-10 67.0 77 51.9
Oeu034957.1 Olea europaea HOM05D000652 ORTHO05D000486 9.3e-10 67.0 82 46.3
Sed0009280 Sechium edule HOM05D000652 ORTHO05D000486 9.3e-10 67.0 76 52.6
PGSC0003DMG400010208 Solanum tuberosum HOM05D000652 ORTHO05D000486 9.3e-10 67.0 65 58.5
Solyc02g076920.3 Solanum lycopersicum HOM05D000652 ORTHO05D000486 1.2e-09 66.6 65 58.5
TAR629G2154 Trochodendron aralioides HOM05D000652 ORTHO05D000486 1.2e-09 66.6 96 49.0
CAN.G456.24 Capsicum annuum HOM05D000652 ORTHO05D000486 1.6e-09 66.2 84 47.6
MBI07_g33319_MAGBIO Magnolia biondii HOM05D000652 ORTHO05D000486 1.6e-09 66.2 98 46.9
Nitab4.5_0002810g0030 Nicotiana tabacum HOM05D000652 ORTHO05D000486 1.6e-09 66.2 68 55.9
Duzib235G1540 Durio zibethinus HOM05D000652 ORTHO05D000486 2.1e-09 65.9 83 48.2
Lalb_Chr18g0059121 Lupinus albus HOM05D000652 ORTHO05D000486 2.7e-09 65.5 80 50.0
Nitab4.5_0003827g0040 Nicotiana tabacum HOM05D000652 ORTHO05D000486 2.7e-09 65.5 82 47.6
SalBow7G4820 Salvia bowleyana HOM05D000652 ORTHO05D000486 2.7e-09 65.5 81 44.4
Sopen02g021850 Solanum pennellii HOM05D000652 ORTHO05D000486 2.7e-09 65.5 65 56.9
MBI06_g25994_MAGBIO Magnolia biondii HOM05D000652 ORTHO05D000486 3.5e-09 65.1 97 46.4
Actinidia28176 Actinidia chinensis HOM05D000652 ORTHO05D000486 4.6e-09 64.7 78 50.0
Glyma.12G209900 Glycine max HOM05D000652 ORTHO05D000486 4.6e-09 64.7 83 45.8
Lj1A1193G77 Lonicera japonica HOM05D000652 ORTHO05D000486 4.6e-09 64.7 81 50.6
Psat7g166360 Pisum sativum HOM05D000652 ORTHO05D000486 4.6e-09 64.7 97 42.3
Sed0001240 Sechium edule HOM05D000652 ORTHO05D000486 4.6e-09 64.7 72 51.4
Glyma.12G122800 Glycine max HOM05D000652 ORTHO05D000486 6.0e-09 64.3 96 40.6
Gohir.A07G185700 Gossypium hirsutum HOM05D000652 ORTHO05D000486 6.0e-09 64.3 83 54.2
Ca_18889_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 7.9e-09 63.9 81 45.7
Gohir.A08G221620 Gossypium hirsutum HOM05D000652 ORTHO05D000486 7.9e-09 63.9 65 58.5
Hma1.2p1_0277F.1_g111720 Hydrangea macrophylla HOM05D000652 ORTHO05D000486 7.9e-09 63.9 67 55.2
QL08p041439 Quercus lobata HOM05D000652 ORTHO05D000486 7.9e-09 63.9 78 50.0
Aqoxy1G03167 Aquilegia oxysepala HOM05D000652 ORTHO05D000486 1.0e-08 63.5 105 41.0
Eucgr.K01103 Eucalyptus grandis HOM05D000652 ORTHO05D000486 1.0e-08 63.5 74 51.4
Glyma.06G283300 Glycine max HOM05D000652 ORTHO05D000486 1.0e-08 63.5 97 42.3
Actinidia10972 Actinidia chinensis HOM05D000652 ORTHO05D000486 1.3e-08 63.2 78 51.3
arahy.Tifrunner.gnm1.ann1.E5BLPW Arachis hypogaea HOM05D000652 ORTHO05D000486 1.3e-08 63.2 99 45.5
Dinv08788 Davidia involucrata HOM05D000652 ORTHO05D000486 1.3e-08 63.2 74 50.0
Sabra19G0103200 Salix brachista HOM05D000652 ORTHO05D000486 1.3e-08 63.2 90 42.2
Medtr4g079760 Medicago truncatula HOM05D000652 ORTHO05D000486 1.8e-08 62.8 81 44.4
Sabra13G0099600 Salix brachista HOM05D000652 ORTHO05D000486 1.8e-08 62.8 73 47.9
Glyma.13G291400 Glycine max HOM05D000652 ORTHO05D000486 2.3e-08 62.4 83 44.6
arahy.Tifrunner.gnm1.ann1.T023HY Arachis hypogaea HOM05D000652 ORTHO05D000486 3.0e-08 62.0 99 44.4
Hma1.2p1_0705F.1_g206890 Hydrangea macrophylla HOM05D000652 ORTHO05D000486 3.0e-08 62.0 67 53.7
Peaxi162Scf00469g00141 Petunia axillaris HOM05D000652 ORTHO05D000486 3.0e-08 62.0 83 45.8
Sed0011134 Sechium edule HOM05D000652 ORTHO05D000486 3.0e-08 62.0 74 51.4
Ciclev10016261m.g Citrus clementina HOM05D000652 ORTHO05D000486 3.9e-08 61.6 75 46.7
Potri.019G089000 Populus trichocarpa HOM05D000652 ORTHO05D000486 3.9e-08 61.6 90 43.3
ECA234G1998 Erigeron canadensis HOM05D000652 ORTHO05D000486 5.1e-08 61.2 99 44.4
Migut.M00256 Erythranthe guttata HOM05D000652 ORTHO05D000486 5.1e-08 61.2 74 50.0
Lj3g0024017 Lotus japonicus HOM05D000652 ORTHO05D000486 5.1e-08 61.2 80 42.5
Lalb_Chr24g0400081 Lupinus albus HOM05D000652 ORTHO05D000486 6.7e-08 60.8 71 42.3
Sc21g0003690 Simmondsia chinensis HOM05D000652 ORTHO05D000486 8.7e-08 60.5 64 54.7
COL.COLO4_33563 Corchorus olitorius HOM05D000652 ORTHO05D000486 1.1e-07 60.1 92 45.7
Medtr2g091190 Medicago truncatula HOM05D000652 ORTHO05D000486 1.1e-07 60.1 79 43.0
Potri.013G117600 Populus trichocarpa HOM05D000652 ORTHO05D000486 1.1e-07 60.1 73 46.6
vmacro12369 Vaccinium macrocarpon HOM05D000652 ORTHO05D000486 1.1e-07 60.1 74 51.4
Sabra19G0099500 Salix brachista HOM05D000652 ORTHO05D000486 1.5e-07 59.7 90 41.1
SEGI_32346 Sequoiadendron giganteum HOM05D000652 ORTHO05D000486 1.5e-07 59.7 63 54.0
AUR62031178 Chenopodium quinoa HOM05D000652 ORTHO05D000486 2.5e-07 58.9 65 47.7
Lalb_Chr19g0134911 Lupinus albus HOM05D000652 ORTHO05D000486 3.3e-07 58.5 98 39.8
AUR62036595 Chenopodium quinoa HOM05D000652 ORTHO05D000486 4.3e-07 58.2 65 46.2
Dinv15455 Davidia involucrata HOM05D000652 ORTHO05D000486 4.3e-07 58.2 68 51.5
QL07p011490 Quercus lobata HOM05D000652 ORTHO05D000486 4.3e-07 58.2 89 40.4
Rhsim06G0132800 Rhododendron simsii HOM05D000652 ORTHO05D000486 4.3e-07 58.2 75 48.0
arahy.Tifrunner.gnm1.ann1.01XFNB Arachis hypogaea HOM05D000652 ORTHO05D000486 5.7e-07 57.8 84 45.2
arahy.Tifrunner.gnm1.ann1.W0QIY9 Arachis hypogaea HOM05D000652 ORTHO05D000486 5.7e-07 57.8 84 45.2
DCAR_021286 Daucus carota HOM05D000652 ORTHO05D000486 5.7e-07 57.8 70 47.1
TPR.G11549 Trifolium pratense HOM05D000652 ORTHO05D000486 5.7e-07 57.8 70 47.1
CDE10G0329 Ceratophyllum demersum HOM05D000652 ORTHO05D000486 7.4e-07 57.4 89 42.7
Ca_01460_v3 Cicer arietinum L. HOM05D000652 ORTHO05D000486 9.6e-07 57.0 75 44.0
Hund21180 Selenicereus undatus HOM05D000001 ORTHO05D012157 9.6e-07 57.0 96 40.6
Thecc.01G148900 Theobroma cacao HOM05D000652 ORTHO05D000486 9.6e-07 57.0 79 41.8
TPR.G23528 Trifolium pratense HOM05D000652 ORTHO05D000486 9.6e-07 57.0 84 46.4
Duzib147G0151 Durio zibethinus HOM05D000652 ORTHO05D000486 1.6e-06 56.2 67 49.3
HPP92_002842 Vanilla planifolia HOM05D000652 ORTHO05D000486 1.6e-06 56.2 67 49.3
Atru.chr6.2808 Acer truncatum HOM05D000652 ORTHO05D000486 2.1e-06 55.8 71 46.5
unitig_21.g20212 Utricularia gibba HOM05D000652 ORTHO05D000486 2.1e-06 55.8 69 46.4
Psat5g275240 Pisum sativum HOM05D000652 ORTHO05D000486 2.8e-06 55.5 67 47.8
ClCG10G013680 Citrullus lanatus HOM05D000652 ORTHO05D000486 4.8e-06 54.7 99 34.3
CANSAT64G1682 Cannabis sativa HOM05D000652 ORTHO05D000486 6.2e-06 54.3 63 47.6
EL10Ac8g20513 Beta vulgaris HOM05D000652 ORTHO05D000486 8.2e-06 53.9 61 50.8
Lsat_1_v5_gn_8_138940 Lactuca sativa HOM05D000652 ORTHO05D000486 8.2e-06 53.9 82 41.5


User provided reference genes

Program Settings