Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_00429_v3 Cicer arietinum L. HOM05D002086 ORTHO05D006228 8.4e-35 150.2 100 100.0
Psat1g198960 Pisum sativum HOM05D002086 ORTHO05D006228 2.8e-30 135.2 78 92.3
Medtr2g015870 Medicago truncatula HOM05D002086 ORTHO05D006228 3.6e-30 134.8 78 92.3
TPR.G11670 Trifolium pratense HOM05D002086 ORTHO05D006228 4.8e-30 134.4 78 93.6
Phvul.006G176600 Phaseolus vulgaris HOM05D002086 ORTHO05D006228 5.3e-29 131.0 79 88.6
Glyma.13G230400 Glycine max HOM05D002086 ORTHO05D006228 9.0e-29 130.2 78 89.7
VMungo0540G1423 Vigna mungo HOM05D002086 ORTHO05D006228 2.2e-27 125.6 79 83.5
Glyma.15G082100 Glycine max HOM05D002086 ORTHO05D006228 3.8e-27 124.8 78 87.2
Lj6g0006416 Lotus japonicus HOM05D002086 ORTHO05D006228 3.2e-26 121.7 75 88.0
arahy.Tifrunner.gnm1.ann1.5A8H0Q Arachis hypogaea HOM05D002086 ORTHO05D006228 3.5e-25 118.2 78 80.8
Lalb_Chr20g0121211 Lupinus albus HOM05D002086 ORTHO05D006228 1.7e-24 115.9 78 82.1
Lalb_Chr15g0089491 Lupinus albus HOM05D002086 ORTHO05D006228 2.5e-23 112.1 78 79.5
Ciclev10015284m.g Citrus clementina HOM05D002086 ORTHO05D006228 6.9e-21 104.0 76 71.1
CANSAT35G2028 Cannabis sativa HOM05D002086 ORTHO05D006228 9.9e-20 100.1 74 71.6
CiPaw.09G069200 Carya illinoinensis HOM05D002086 ORTHO05D006228 1.3e-19 99.8 75 69.3
Duzib235G1192 Durio zibethinus HOM05D002086 ORTHO05D006228 1.3e-19 99.8 76 67.1
arahy.Tifrunner.gnm1.ann1.3Q5GH0 Arachis hypogaea HOM05D002086 ORTHO05D006228 2.2e-19 99.0 70 77.1
Duzib192G0919 Durio zibethinus HOM05D002086 ORTHO05D006228 1.9e-18 95.9 76 65.8
Atru.chr10.1681 Acer truncatum HOM05D002086 ORTHO05D006228 2.4e-18 95.5 76 64.5
Cpa.g.sc7.55 Carica papaya HOM05D002086 ORTHO05D006228 2.4e-18 95.5 76 63.2
RcHm_v2.0_Chr5g0010651 Rosa chinensis HOM05D002086 ORTHO05D006228 2.4e-18 95.5 74 64.9
Gohir.D05G158600 Gossypium hirsutum HOM05D002086 ORTHO05D006228 3.2e-18 95.1 74 68.9
Gorai.009G163600 Gossypium raimondii HOM05D002086 ORTHO05D006228 3.2e-18 95.1 74 68.9
FvH4_3g07900 Fragaria vesca HOM05D002086 ORTHO05D006228 4.2e-18 94.7 74 66.2
FAN11G2105 Fragaria x ananassa HOM05D002086 ORTHO05D006228 4.2e-18 94.7 74 66.2
FAN16G2755 Fragaria x ananassa HOM05D002086 ORTHO05D006228 4.2e-18 94.7 74 66.2
FAN21G1259 Fragaria x ananassa HOM05D002086 ORTHO05D006228 4.2e-18 94.7 74 66.2
FAN25G3746 Fragaria x ananassa HOM05D002086 ORTHO05D006228 4.2e-18 94.7 74 66.2
Sp4g10220 Schrenkiella parvula HOM05D002086 ORTHO05D006228 4.2e-18 94.7 77 64.9
Manes.16G038100 Manihot esculenta HOM05D002086 ORTHO05D006228 5.4e-18 94.4 76 64.5
QL05p046515 Quercus lobata HOM05D002086 ORTHO05D006228 5.4e-18 94.4 78 65.4
Sabra11G0047000 Salix brachista HOM05D002086 ORTHO05D006228 5.4e-18 94.4 78 62.8
Cfa000599 Carpinus fangiana HOM05D002086 ORTHO05D006228 7.1e-18 94.0 74 66.2
CARHR120020 Cardamine hirsuta HOM05D002086 ORTHO05D006228 9.3e-18 93.6 77 64.9
CiPaw.10G058100 Carya illinoinensis HOM05D002086 ORTHO05D006228 9.3e-18 93.6 75 62.7
AT2G27430 Arabidopsis thaliana HOM05D002086 ORTHO05D006228 1.2e-17 93.2 77 62.3
Dinv04616 Davidia involucrata HOM05D002086 ORTHO05D006228 1.6e-17 92.8 76 63.2
Lj2A297G105 Lonicera japonica HOM05D002086 ORTHO05D006228 2.7e-17 92.0 75 65.3
Haze_06245 Corylus avellana HOM05D002086 ORTHO05D006228 3.5e-17 91.7 74 62.2
Potri.004G055500 Populus trichocarpa HOM05D002086 ORTHO05D006228 4.6e-17 91.3 75 61.3
Sabra04G0036200 Salix brachista HOM05D002086 ORTHO05D006228 4.6e-17 91.3 78 60.3
Carub.0004s0805 Capsella rubella HOM05D002086 ORTHO05D006228 6.0e-17 90.9 77 63.6
Dinv40665 Davidia involucrata HOM05D002086 ORTHO05D006228 6.0e-17 90.9 76 60.5
Glyma.02G139800 Glycine max HOM05D002086 ORTHO05D006228 6.0e-17 90.9 74 70.3
MD05G1302200 Malus domestica HOM05D002086 ORTHO05D006228 6.0e-17 90.9 75 66.7
Prupe.4G060200 Prunus persica HOM05D002086 ORTHO05D006228 6.0e-17 90.9 75 66.7
THA.LOC104826430 Tarenaya hassleriana HOM05D002086 ORTHO05D006228 6.0e-17 90.9 76 67.1
Thecc.06G172200 Theobroma cacao HOM05D002086 ORTHO05D006228 6.0e-17 90.9 75 64.0
Potri.011G065300 Populus trichocarpa HOM05D002086 ORTHO05D006228 7.9e-17 90.5 76 61.8
TAR624G0911 Trochodendron aralioides HOM05D002086 ORTHO05D006228 7.9e-17 90.5 76 59.2
THA.LOC104800523 Tarenaya hassleriana HOM05D002086 ORTHO05D006228 1.0e-16 90.1 76 63.2
TWI38G1782 Tripterygium wilfordii HOM05D002086 ORTHO05D006228 1.0e-16 90.1 76 64.5
Gohir.A06G130900 Gossypium hirsutum HOM05D002086 ORTHO05D006228 1.3e-16 89.7 76 63.2
Phvul.003G058700 Phaseolus vulgaris HOM05D002086 ORTHO05D006228 1.3e-16 89.7 75 66.7
GSVIVG01021200001 Vitis vinifera HOM05D002086 ORTHO05D006228 1.3e-16 89.7 74 64.9
AL4G21380 Arabidopsis lyrata HOM05D002086 ORTHO05D006228 1.8e-16 89.4 76 63.2
MD10G1280900 Malus domestica HOM05D002086 ORTHO05D006228 1.8e-16 89.4 75 66.7
Manes.17G054800 Manihot esculenta HOM05D002086 ORTHO05D006228 1.8e-16 89.4 76 61.8
TAR627G0468 Trochodendron aralioides HOM05D002086 ORTHO05D006228 1.8e-16 89.4 76 60.5
Gohir.A05G155900 Gossypium hirsutum HOM05D002086 ORTHO05D006228 3.0e-16 88.6 74 66.2
Gohir.D06G136900 Gossypium hirsutum HOM05D002086 ORTHO05D006228 5.1e-16 87.8 76 61.8
Hma1.2p1_0987F.1_g244500 Hydrangea macrophylla HOM05D002086 ORTHO05D006228 5.1e-16 87.8 74 64.9
Nn1g04380 Nelumbo nucifera HOM05D002086 ORTHO05D006228 8.7e-16 87.0 78 56.4
SalBow8G3559 Salvia bowleyana HOM05D002086 ORTHO05D006228 8.7e-16 87.0 74 59.5
TAR626G1769 Trochodendron aralioides HOM05D002086 ORTHO05D006228 8.7e-16 87.0 76 60.5
PSO675G1957 Papaver somniferum HOM05D002086 ORTHO05D006228 1.1e-15 86.7 77 57.1
A03p26600 Brassica napus HOM05D002086 ORTHO05D006228 3.3e-15 85.1 77 58.4
Glyma.07G205700 Glycine max HOM05D002086 ORTHO05D006228 3.3e-15 85.1 77 64.9
Gorai.010G159100 Gossypium raimondii HOM05D002086 ORTHO05D006228 3.3e-15 85.1 76 60.5
Oeu039934.1 Olea europaea HOM05D002086 ORTHO05D006228 3.3e-15 85.1 76 56.6
MSTRG.7400 Avicennia marina HOM05D002086 ORTHO05D006228 4.3e-15 84.7 78 55.1
ClCG01G023690 Citrullus lanatus HOM05D002086 ORTHO05D006228 4.3e-15 84.7 78 60.3
PSO541G3950 Papaver somniferum HOM05D002086 ORTHO05D006228 5.6e-15 84.3 77 55.8
Thhalv10001989m.g Eutrema salsugineum HOM05D002086 ORTHO05D006228 7.4e-15 84.0 77 61.0
Sed0008773 Sechium edule HOM05D002086 ORTHO05D006228 9.6e-15 83.6 77 59.7
Actinidia35573 Actinidia chinensis HOM05D002086 ORTHO05D006228 1.3e-14 83.2 76 57.9
C03p31880 Brassica napus HOM05D002086 ORTHO05D006228 1.3e-14 83.2 77 57.1
BraA03t11872Z Brassica rapa HOM05D002086 ORTHO05D006228 1.3e-14 83.2 77 57.1
BcaB01g03072 Brassica carinata HOM05D002086 ORTHO05D006228 1.6e-14 82.8 77 58.4
Aqoxy1G03179 Aquilegia oxysepala HOM05D002086 ORTHO05D006228 2.1e-14 82.4 76 55.3
BolC3t15530H Brassica oleracea HOM05D002086 ORTHO05D006228 2.1e-14 82.4 77 57.1
Oeu041791.1 Olea europaea HOM05D002086 ORTHO05D006228 2.1e-14 82.4 76 55.3
BcaC01g04941 Brassica carinata HOM05D002086 ORTHO05D006228 2.8e-14 82.0 77 57.1
Lj1A1193T84 Lonicera japonica HOM05D002086 ORTHO05D006228 6.2e-14 80.9 75 54.7
Medtr4g071430 Medicago truncatula HOM05D002086 ORTHO05D006228 6.2e-14 80.9 67 65.7
Hund21182 Selenicereus undatus HOM05D002086 ORTHO05D006228 6.2e-14 80.9 77 55.8
MSTRG.16146 Avicennia marina HOM05D002086 ORTHO05D006228 8.1e-14 80.5 74 55.4
C04p24170 Brassica napus HOM05D002086 ORTHO05D006228 8.1e-14 80.5 77 59.7
BolC4t23914H Brassica oleracea HOM05D002086 ORTHO05D006228 8.1e-14 80.5 77 59.7
MELO3C007215.2 Cucumis melo HOM05D002086 ORTHO05D006228 8.1e-14 80.5 78 56.4
Cc02_g14820 Coffea canephora HOM05D002086 ORTHO05D006228 1.1e-13 80.1 76 52.6
Peaxi162Scf00261g00127 Petunia axillaris HOM05D002086 ORTHO05D006228 1.4e-13 79.7 78 56.4
BcaB02g10089 Brassica carinata HOM05D002086 ORTHO05D006228 1.8e-13 79.3 77 58.4
Nitab4.5_0002810g0020 Nicotiana tabacum HOM05D002086 ORTHO05D006228 1.8e-13 79.3 78 56.4
Actinidia07634 Actinidia chinensis HOM05D002086 ORTHO05D006228 3.1e-13 78.6 78 55.1
BcaC02g10873 Brassica carinata HOM05D002086 ORTHO05D006228 3.1e-13 78.6 77 58.4
CsaV3_6G050850 Cucumis sativus L. HOM05D002086 ORTHO05D006228 4.0e-13 78.2 78 56.4
Nitab4.5_0009762g0020 Nicotiana tabacum HOM05D002086 ORTHO05D006228 4.0e-13 78.2 78 55.1
Aa31LG5G8770 Aethionema arabicum HOM05D002086 ORTHO05D006228 5.3e-13 77.8 77 57.1
AUR62031176 Chenopodium quinoa HOM05D002086 ORTHO05D006228 5.3e-13 77.8 76 55.3
Migut.M01046 Erythranthe guttata HOM05D002086 ORTHO05D006228 5.3e-13 77.8 75 56.0
MBI07_g21392_MAGBIO Magnolia biondii HOM05D002086 ORTHO05D006228 6.9e-13 77.4 76 51.3
A07p18190 Brassica napus HOM05D002086 ORTHO05D006228 9.0e-13 77.0 77 57.1
BraA07t29535Z Brassica rapa HOM05D002086 ORTHO05D006228 9.0e-13 77.0 77 57.1
PGSC0003DMG400010209 Solanum tuberosum HOM05D002086 ORTHO05D006228 9.0e-13 77.0 79 53.2
AUR62036592 Chenopodium quinoa HOM05D005057 ORTHO05D006570 1.2e-12 76.6 75 56.0
PGR004G2254 Punica granatum HOM05D002086 ORTHO05D006228 2.0e-12 75.9 78 56.4
DCAR_007959 Daucus carota HOM05D002086 ORTHO05D006228 3.4e-12 75.1 75 53.3
unitig_699.g19361 Utricularia gibba HOM05D002086 ORTHO05D006228 4.5e-12 74.7 74 54.1
DCAR_005231 Daucus carota HOM05D002086 ORTHO05D006228 5.8e-12 74.3 75 52.0
CAN.G370.65 Capsicum annuum HOM05D002086 ORTHO05D006228 2.9e-11 72.0 76 53.9
ECA234G2078 Erigeron canadensis HOM05D002086 ORTHO05D006228 2.9e-11 72.0 78 51.3
vmacro15968 Vaccinium macrocarpon HOM05D002086 ORTHO05D006228 2.9e-11 72.0 76 53.9
EL10Ac8g20511 Beta vulgaris HOM05D002086 ORTHO05D006228 4.9e-11 71.2 79 51.9
Sopen02g021860 Solanum pennellii HOM05D002086 ORTHO05D006228 4.9e-11 71.2 79 51.9
Actinidia39500 Actinidia chinensis HOM05D002086 ORTHO05D006228 6.5e-11 70.9 78 52.6
DCAR_004012 Daucus carota HOM05D002086 ORTHO05D006228 8.4e-11 70.5 76 50.0
TPR.G23527 Trifolium pratense HOM05D002086 ORTHO05D048819 8.4e-11 70.5 53 69.8
Solyc02g076930.2 Solanum lycopersicum HOM05D002086 ORTHO05D006228 2.5e-10 68.9 78 51.3
ClCG03G007790 Citrullus lanatus HOM05D002086 ORTHO05D006228 3.2e-10 68.6 77 53.2
SGA_v2.0_scaffold1G00035 Striga asiatica HOM05D002086 ORTHO05D006228 3.2e-10 68.6 75 50.7
Rhsim02G0141100 Rhododendron simsii HOM05D002086 ORTHO05D006228 4.2e-10 68.2 79 50.6
Lsat_1_v5_gn_4_49781 Lactuca sativa HOM05D002086 ORTHO05D006228 1.6e-09 66.2 76 50.0
Ah.14g087190 Amaranthus hybridus HOM05D002086 ORTHO05D006228 4.6e-09 64.7 77 44.2
HanXRQChr16g0518941 Helianthus annuus HOM05D002086 ORTHO05D006228 1.3e-08 63.2 77 51.9
MELO3C002643.2 Cucumis melo HOM05D002086 ORTHO05D006228 3.0e-08 62.0 80 50.0
Sed0016662 Sechium edule HOM05D002086 ORTHO05D006228 5.1e-08 61.2 74 45.9
SEGI_18796 Sequoiadendron giganteum HOM05D002086 ORTHO05D006228 5.1e-08 61.2 74 47.3
SGA_v2.0_scaffold16G07676 Striga asiatica HOM05D002086 ORTHO05D006228 6.7e-08 60.8 59 54.2
CsaV3_1G033420 Cucumis sativus L. HOM05D002086 ORTHO05D006228 2.5e-07 58.9 80 47.5
Ah.09g233640 Amaranthus hybridus HOM05D002086 ORTHO05D006228 4.3e-07 58.2 73 50.7
Hma1.2p1_0155F.1_g068140 Hydrangea macrophylla HOM05D002086 ORTHO05D006228 6.2e-06 54.3 52 59.6
Sc24g0001040 Simmondsia chinensis HOM05D002086 ORTHO05D006228 8.2e-06 53.9 84 38.1


User provided reference genes

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