Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_00413_v3 Cicer arietinum L. HOM05D009670 ORTHO05D010890 5.4e-230 800.8 456 100.0
Ca_30157_v3 Cicer arietinum L. HOM05D009670 ORTHO05D010890 5.4e-230 800.8 456 100.0
Medtr2g015330 Medicago truncatula HOM05D009670 ORTHO05D010890 9.4e-142 507.7 460 64.3
Lj6g0011843 Lotus japonicus HOM05D009670 ORTHO05D010890 2.2e-114 416.8 464 58.4
Glyma.15G079800 Glycine max HOM05D009670 ORTHO05D010890 3.4e-107 392.9 458 53.3
TPR.G11728 Trifolium pratense HOM05D009670 ORTHO05D010890 2.2e-98 363.6 311 66.6
Psat1g200600 Pisum sativum HOM05D009670 ORTHO05D010890 1.1e-97 361.3 468 52.8
Phvul.006G178900 Phaseolus vulgaris HOM05D009670 ORTHO05D010890 1.6e-96 357.5 456 51.5
VMungo0540G1521 Vigna mungo HOM05D009670 ORTHO05D010890 4.3e-94 349.4 456 50.7
Lj1g0012311 Lotus japonicus HOM05D009670 ORTHO05D010890 7.3e-94 348.6 458 51.3
arahy.Tifrunner.gnm1.ann1.33PIHY Arachis hypogaea HOM05D009670 ORTHO05D010890 4.0e-92 342.8 464 54.7
arahy.Tifrunner.gnm1.ann1.81KKWU Arachis hypogaea HOM05D009670 ORTHO05D010890 5.2e-92 342.4 464 54.1
Medtr4g048110 Medicago truncatula HOM05D009670 ORTHO05D010890 1.2e-88 331.3 473 50.7
Lalb_Chr18g0059231 Lupinus albus HOM05D009670 ORTHO05D010890 2.7e-64 250.4 459 42.9
Lalb_Chr15g0089411 Lupinus albus HOM05D009670 ORTHO05D010890 1.4e-60 238.0 459 44.0
Lalb_Chr20g0121361 Lupinus albus HOM05D009670 ORTHO05D010890 2.5e-49 200.7 462 39.4
TPR.G39843 Trifolium pratense HOM05D009670 ORTHO05D010890 1.0e-26 125.6 90 71.1
TPR.G39306 Trifolium pratense HOM05D009670 ORTHO05D010890 1.7e-26 124.8 90 70.0
Psat1g200480 Pisum sativum HOM05D009670 ORTHO05D010890 8.5e-26 122.5 458 31.4
CiPaw.09G066800 Carya illinoinensis HOM05D009670 ORTHO05D010890 4.1e-20 103.6 467 30.0
Manes.17G052800 Manihot esculenta HOM05D013066 ORTHO05D010890 1.2e-16 92.0 468 32.5
Psat1g200520 Pisum sativum HOM05D009670 ORTHO05D010890 2.6e-14 84.3 147 42.2
Dinv17387 Davidia involucrata HOM05D006105 ORTHO05D006345 1.7e-13 81.6 420 26.9
Gohir.A05G157001 Gossypium hirsutum HOM05D013066 ORTHO05D010890 1.7e-13 81.6 379 28.0
Gohir.D05G159900 Gossypium hirsutum HOM05D013066 ORTHO05D010890 3.7e-13 80.5 379 28.0
Actinidia18787 Actinidia chinensis HOM05D006105 ORTHO05D006345 1.6e-11 75.1 449 28.5
Gorai.009G164800 Gossypium raimondii HOM05D013066 ORTHO05D010890 1.6e-11 75.1 379 27.4
arahy.Tifrunner.gnm1.ann1.6KS8DY Arachis hypogaea HOM05D009670 ORTHO05D010890 3.5e-11 73.9 86 51.2
Actinidia35226 Actinidia chinensis HOM05D006105 ORTHO05D006345 1.3e-10 72.0 444 26.8
Manes.16G035200 Manihot esculenta HOM05D013066 ORTHO05D006345 1.3e-10 72.0 489 26.8
Thecc.06G176400 Theobroma cacao HOM05D013066 ORTHO05D010890 1.3e-10 72.0 459 29.0
Cfa000566 Carpinus fangiana HOM05D038757 ORTHO05D010890 2.9e-10 70.9 380 27.6
Nn1g09023 Nelumbo nucifera HOM05D006105 ORTHO05D006345 2.9e-10 70.9 441 27.7
Psat1g200440 Pisum sativum HOM05D009670 ORTHO05D010890 1.5e-09 68.6 48 66.7
Atru.chr10.1733 Acer truncatum HOM05D009670 ORTHO05D010890 7.2e-09 66.2 303 28.7
TPR.G11749 Trifolium pratense HOM05D009670 ORTHO05D010890 9.5e-09 65.9 57 66.7
Potri.004G052900 Populus trichocarpa HOM05D058718 ORTHO05D010890 2.8e-08 64.3 431 27.4
CiPaw.11G164300 Carya illinoinensis HOM05D006105 ORTHO05D006345 4.7e-08 63.5 360 26.9
CANSAT35G1313 Cannabis sativa HOM05D009670 ORTHO05D010890 5.2e-07 60.1 440 27.7
GSVIVG01014239001 Vitis vinifera HOM05D006105 ORTHO05D006345 6.8e-07 59.7 389 27.5
CSS0026032 Camellia sinensis var. sinensis HOM05D006105 ORTHO05D006345 7.5e-06 56.2 439 25.5


User provided reference genes

Program Settings