Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_00403_v3 Cicer arietinum L. HOM05D007416 ORTHO05D009329 7.0e-60 233.8 121 100.0
TPR.G39540 Trifolium pratense HOM05D007416 ORTHO05D009329 7.5e-46 187.2 118 83.1
TPR.G11747 Trifolium pratense HOM05D007416 ORTHO05D009329 2.2e-45 185.7 118 82.2
Medtr2g014970 Medicago truncatula HOM05D007416 ORTHO05D009329 1.5e-38 162.9 114 74.6
Psat1g201280 Pisum sativum HOM05D007416 ORTHO05D009329 9.8e-38 160.2 118 72.0
Lj6g0009243 Lotus japonicus HOM05D007416 ORTHO05D009329 3.6e-32 141.7 119 63.9
VMungo0540G0454 Vigna mungo HOM05D007416 ORTHO05D009329 6.1e-32 141.0 93 74.2
Phvul.006G180100 Phaseolus vulgaris HOM05D007416 ORTHO05D009329 5.2e-31 137.9 119 62.2
Glyma.13G152576 Glycine max HOM05D007416 ORTHO05D009329 1.2e-30 136.7 110 70.0
arahy.Tifrunner.gnm1.ann1.46W2M6 Arachis hypogaea HOM05D007416 ORTHO05D009329 3.0e-26 122.1 99 62.6
arahy.Tifrunner.gnm1.ann1.96U62E Arachis hypogaea HOM05D007416 ORTHO05D009329 3.0e-26 122.1 99 62.6
Hma1.2p1_1465F.1_g285370 Hydrangea macrophylla HOM05D007416 ORTHO05D009329 1.9e-25 119.4 96 64.6
ECA234G4626 Erigeron canadensis HOM05D007416 ORTHO05D009329 5.6e-25 117.9 70 75.7
MD10G1286700 Malus domestica HOM05D007416 ORTHO05D009329 1.2e-24 116.7 94 62.8
Lalb_Chr20g0121431 Lupinus albus HOM05D007416 ORTHO05D009329 3.6e-24 115.2 99 62.6
COL.COLO4_31395 Corchorus olitorius HOM05D007416 ORTHO05D009329 6.2e-24 114.4 104 58.7
Potri.004G051300 Populus trichocarpa HOM05D007416 ORTHO05D009329 8.0e-24 114.0 120 52.5
Prupe.4G055000 Prunus persica HOM05D007416 ORTHO05D009329 1.0e-23 113.6 98 60.2
PSO675G1239 Papaver somniferum HOM05D007416 ORTHO05D009329 1.4e-23 113.2 93 59.1
Haze_06330 Corylus avellana HOM05D007416 ORTHO05D009329 1.8e-23 112.8 103 57.3
CANSAT35G0095 Cannabis sativa HOM05D007416 ORTHO05D009329 6.8e-23 110.9 101 55.4
CiPaw.10G054100 Carya illinoinensis HOM05D007416 ORTHO05D009329 1.2e-22 110.2 99 58.6
SGA_v2.0_scaffold309G48156 Striga asiatica HOM05D007416 ORTHO05D009329 1.2e-22 110.2 111 53.2
Aqoxy1G02242 Aquilegia oxysepala HOM05D007416 ORTHO05D009329 1.5e-22 109.8 95 58.9
CDE05G1837 Ceratophyllum demersum HOM05D007416 ORTHO05D009329 1.5e-22 109.8 57 80.7
Ciclev10017211m.g Citrus clementina HOM05D007416 ORTHO05D009329 1.5e-22 109.8 97 55.7
Cfa000548 Carpinus fangiana HOM05D007416 ORTHO05D009329 2.6e-22 109.0 102 54.9
Carub.0001s2700 Capsella rubella HOM05D007416 ORTHO05D009329 3.4e-22 108.6 76 64.5
Migut.M01088 Erythranthe guttata HOM05D007416 ORTHO05D009329 3.4e-22 108.6 111 52.3
Oeu012170.1 Olea europaea HOM05D007416 ORTHO05D009329 3.4e-22 108.6 97 60.8
Os06g0524500 Oryza sativa ssp. japonica HOM05D007416 ORTHO05D009329 3.4e-22 108.6 57 75.4
Manes.17G051100 Manihot esculenta HOM05D007416 ORTHO05D009329 4.4e-22 108.2 106 51.9
Thecc.06G178300 Theobroma cacao HOM05D007416 ORTHO05D009329 4.4e-22 108.2 108 55.6
AUR62031108 Chenopodium quinoa HOM05D007416 ORTHO05D009329 5.8e-22 107.8 99 59.6
Gohir.A02G025200 Gossypium hirsutum HOM05D007416 ORTHO05D009329 5.8e-22 107.8 103 53.4
Gorai.005G035900 Gossypium raimondii HOM05D007416 ORTHO05D009329 5.8e-22 107.8 103 53.4
HanXRQChr14g0454031 Helianthus annuus HOM05D007416 ORTHO05D009329 5.8e-22 107.8 61 75.4
SGA_v2.0_scaffold16G07657 Striga asiatica HOM05D007416 ORTHO05D009329 5.8e-22 107.8 92 59.8
AT1G28540 Arabidopsis thaliana HOM05D007416 ORTHO05D009329 7.5e-22 107.5 65 72.3
MELO3C007245.2 Cucumis melo HOM05D007416 ORTHO05D009329 7.5e-22 107.5 57 80.7
AUR62014900 Chenopodium quinoa HOM05D007416 ORTHO05D009329 9.8e-22 107.1 98 57.1
Gohir.D02G032400 Gossypium hirsutum HOM05D007416 ORTHO05D009329 9.8e-22 107.1 103 53.4
Lsat_1_v5_gn_1_119080 Lactuca sativa HOM05D007416 ORTHO05D009329 9.8e-22 107.1 119 48.7
Nitab4.5_0002114g0110 Nicotiana tabacum HOM05D007416 ORTHO05D009329 9.8e-22 107.1 93 57.0
Nitab4.5_0014582g0020 Nicotiana tabacum HOM05D007416 ORTHO05D009329 9.8e-22 107.1 99 58.6
Os06g0525000 Oryza sativa ssp. japonica HOM05D007416 ORTHO05D009329 9.8e-22 107.1 57 75.4
Dinv17369 Davidia involucrata HOM05D007416 ORTHO05D009329 1.3e-21 106.7 102 54.9
FvH4_3g08330 Fragaria vesca HOM05D007416 ORTHO05D009329 1.3e-21 106.7 82 65.9
FAN21G3844 Fragaria x ananassa HOM05D007416 ORTHO05D009329 1.3e-21 106.7 85 64.7
Atru.chr10.1755 Acer truncatum HOM05D007416 ORTHO05D009329 1.7e-21 106.3 92 59.8
FAN16G3750 Fragaria x ananassa HOM05D007416 ORTHO05D009329 1.7e-21 106.3 66 71.2
PGR004G2353 Punica granatum HOM05D007416 ORTHO05D009329 1.7e-21 106.3 93 58.1
Sc17g0005840 Simmondsia chinensis HOM05D007416 ORTHO05D009329 1.7e-21 106.3 85 60.0
ClCG01G023400 Citrullus lanatus HOM05D007416 ORTHO05D009329 2.2e-21 105.9 90 60.0
Cpa.g.sc7.10 Carica papaya HOM05D007416 ORTHO05D009329 2.9e-21 105.5 78 62.8
CSS0002821 Camellia sinensis var. sinensis HOM05D007416 ORTHO05D009329 3.7e-21 105.1 81 60.5
Eucgr.D00578 Eucalyptus grandis HOM05D007416 ORTHO05D009329 3.7e-21 105.1 96 53.1
Sed0002237 Sechium edule HOM05D007416 ORTHO05D009329 3.7e-21 105.1 113 48.7
Cc02_g14200 Coffea canephora HOM05D007416 ORTHO05D009329 4.9e-21 104.8 100 53.0
RcHm_v2.0_Chr5g0009671 Rosa chinensis HOM05D007416 ORTHO05D009329 6.4e-21 104.4 114 56.1
PGSC0003DMG400022819 Solanum tuberosum HOM05D007416 ORTHO05D009329 6.4e-21 104.4 112 50.0
THA.LOC104812624 Tarenaya hassleriana HOM05D007416 ORTHO05D009329 6.4e-21 104.4 104 53.8
TWI38G0960 Tripterygium wilfordii HOM05D007416 ORTHO05D009329 6.4e-21 104.4 115 48.7
TAR627G0809 Trochodendron aralioides HOM05D003433 ORTHO05D003921 6.4e-21 104.4 57 75.4
unitig_8.g4657 Utricularia gibba HOM05D004204 ORTHO05D005069 6.4e-21 104.4 103 55.3
FAN25G0684 Fragaria x ananassa HOM05D007416 ORTHO05D009329 8.3e-21 104.0 79 69.6
Peaxi162Scf00248g00011 Petunia axillaris HOM05D007416 ORTHO05D009329 1.1e-20 103.6 112 48.2
A08p25450 Brassica napus HOM05D007416 ORTHO05D009329 1.4e-20 103.2 61 73.8
BraA08t34496Z Brassica rapa HOM05D007416 ORTHO05D009329 1.4e-20 103.2 61 73.8
Thhalv10009143m.g Eutrema salsugineum HOM05D007416 ORTHO05D009329 1.4e-20 103.2 85 57.6
unitig_8.g4633 Utricularia gibba HOM05D007416 ORTHO05D009329 1.4e-20 103.2 127 48.0
unitig_8.g4637 Utricularia gibba HOM05D007416 ORTHO05D009329 1.4e-20 103.2 127 48.0
Ah.09g237760 Amaranthus hybridus HOM05D007416 ORTHO05D009329 1.9e-20 102.8 116 51.7
AL1G42170 Arabidopsis lyrata HOM05D007416 ORTHO05D009329 1.9e-20 102.8 93 53.8
TWI63G0778 Tripterygium wilfordii HOM05D007416 ORTHO05D009329 1.9e-20 102.8 122 45.1
CARHR028020 Cardamine hirsuta HOM05D007416 ORTHO05D009329 2.4e-20 102.4 95 55.8
Mapoly0016s0097 Marchantia polymorpha HOM05D007416 ORTHO05D009329 3.2e-20 102.1 55 74.5
CAN.G361.15 Capsicum annuum HOM05D007416 ORTHO05D009329 4.1e-20 101.7 89 56.2
SalBow8G2036 Salvia bowleyana HOM05D007416 ORTHO05D009329 4.1e-20 101.7 116 51.7
Nn1g06362 Nelumbo nucifera HOM05D007416 ORTHO05D009329 5.4e-20 101.3 111 51.4
Solyc10g008850.2 Solanum lycopersicum HOM05D007416 ORTHO05D009329 7.0e-20 100.9 92 54.3
Sopen10g004640 Solanum pennellii HOM05D007416 ORTHO05D009329 7.0e-20 100.9 92 54.3
EL10Ac8g20461 Beta vulgaris HOM05D007416 ORTHO05D009329 1.2e-19 100.1 100 58.0
CsaV3_6G050530 Cucumis sativus L. HOM05D007416 ORTHO05D009329 1.2e-19 100.1 95 55.8
BraA07t28904Z Brassica rapa HOM05D007416 ORTHO05D009329 2.7e-19 99.0 101 51.5
Sp1g24790 Schrenkiella parvula HOM05D007416 ORTHO05D009329 2.7e-19 99.0 101 52.5
BcaB03g12097 Brassica carinata HOM05D007416 ORTHO05D009329 4.6e-19 98.2 101 50.5
BolC3t19794H Brassica oleracea HOM05D007416 ORTHO05D009329 4.6e-19 98.2 101 51.5
Aa31LG6G11050 Aethionema arabicum HOM05D007416 ORTHO05D009329 6.0e-19 97.8 53 75.5
BcaC01g00068 Brassica carinata HOM05D007416 ORTHO05D009329 6.0e-19 97.8 100 52.0
C07p16790 Brassica napus HOM05D007416 ORTHO05D009329 6.0e-19 97.8 101 50.5
QL05p043606 Quercus lobata HOM05D007416 ORTHO05D009329 6.0e-19 97.8 99 47.5
Rhsim02G0137800 Rhododendron simsii HOM05D007416 ORTHO05D009329 6.0e-19 97.8 118 46.6
HPP92_005210 Vanilla planifolia HOM05D007416 ORTHO05D009329 6.0e-19 97.8 99 50.5
C03p75360 Brassica napus HOM05D007416 ORTHO05D009329 1.3e-18 96.7 100 51.0
Actinidia07614 Actinidia chinensis HOM05D007416 ORTHO05D009329 4.3e-17 91.7 116 44.8
HPP92_008637 Vanilla planifolia HOM05D007416 ORTHO05D009329 2.8e-16 89.0 99 48.5
BolC7t42186H Brassica oleracea HOM05D007416 ORTHO05D009329 6.2e-16 87.8 101 48.5
FAN11G0205 Fragaria x ananassa HOM05D007416 ORTHO05D009329 2.3e-15 85.9 55 70.9
Pp3c24_10110 Physcomitrium patens HOM05D007416 ORTHO05D009329 4.4e-14 81.6 82 48.8
AUR62031107 Chenopodium quinoa HOM05D007416 ORTHO05D009329 6.4e-13 77.8 70 50.0
AagrBONN_evm.TU.Sc2ySwM_362.2610 Anthoceros agrestis HOM05D007416 ORTHO05D009329 4.1e-12 75.1 78 46.2
A07p11140 Brassica napus HOM05D007416 ORTHO05D009329 3.5e-11 72.0 85 47.1


User provided reference genes

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