Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_00386_v3 Cicer arietinum L. HOM05D007518 ORTHO05D008168 8.8e-43 176.8 105 100.0
TPR.G28676 Trifolium pratense HOM05D007518 ORTHO05D008168 6.1e-36 154.1 127 77.2
Medtr5g019920 Medicago truncatula HOM05D007518 ORTHO05D008168 5.1e-35 151.0 127 77.2
QL06p045656 Quercus lobata HOM05D007518 ORTHO05D008168 3.7e-33 144.8 126 69.8
Glyma.11G067100 Glycine max HOM05D007518 ORTHO05D008168 4.8e-33 144.4 127 72.4
Haze_15107 Corylus avellana HOM05D007518 ORTHO05D008168 6.3e-33 144.1 128 71.1
Cfa004294 Carpinus fangiana HOM05D007518 ORTHO05D008168 8.2e-33 143.7 127 70.1
Lalb_Chr09g0322501 Lupinus albus HOM05D007518 ORTHO05D008168 5.3e-32 141.0 127 69.3
Lj2g0015504 Lotus japonicus HOM05D007518 ORTHO05D008168 7.0e-32 140.6 128 72.7
CiPaw.02G016200 Carya illinoinensis HOM05D007518 ORTHO05D008168 7.7e-31 137.1 128 68.0
MELO3C007820.2 Cucumis melo HOM05D007518 ORTHO05D008168 7.7e-31 137.1 127 66.1
PGR119G2546 Punica granatum HOM05D007518 ORTHO05D008168 1.3e-30 136.3 127 66.1
Cfa004293 Carpinus fangiana HOM05D007518 ORTHO05D008168 2.2e-30 135.6 129 68.2
Sed0026205 Sechium edule HOM05D007518 ORTHO05D008168 2.2e-30 135.6 127 65.4
VMungo1215G2461 Vigna mungo HOM05D007518 ORTHO05D008168 2.2e-30 135.6 129 68.2
arahy.Tifrunner.gnm1.ann1.5UMV3I Arachis hypogaea HOM05D007518 ORTHO05D008168 5.0e-30 134.4 130 67.7
arahy.Tifrunner.gnm1.ann1.RRU65L Arachis hypogaea HOM05D007518 ORTHO05D008168 5.0e-30 134.4 130 67.7
CsaV3_6G046170 Cucumis sativus L. HOM05D007518 ORTHO05D008168 6.5e-30 134.0 127 65.4
Ciclev10026615m.g Citrus clementina HOM05D007518 ORTHO05D008168 8.5e-30 133.7 127 66.1
CSS0014655 Camellia sinensis var. sinensis HOM05D007518 ORTHO05D008168 1.1e-29 133.3 127 66.9
COL.COLO4_22099 Corchorus olitorius HOM05D007518 ORTHO05D008168 2.5e-29 132.1 127 63.8
Eucgr.I02457 Eucalyptus grandis HOM05D007518 ORTHO05D008168 3.2e-29 131.7 129 66.7
Lj2P450T11 Lonicera japonica HOM05D007518 ORTHO05D008168 7.2e-29 130.6 129 63.6
Prupe.7G152700 Prunus persica HOM05D007518 ORTHO05D008168 7.2e-29 130.6 129 66.7
Phvul.002G029100 Phaseolus vulgaris HOM05D007518 ORTHO05D008168 9.4e-29 130.2 129 68.2
Psat2g160680 Pisum sativum HOM05D007518 ORTHO05D008168 1.6e-28 129.4 113 78.8
TAR628G0256 Trochodendron aralioides HOM05D007518 ORTHO05D008168 1.6e-28 129.4 127 63.0
Thecc.01G037800 Theobroma cacao HOM05D007518 ORTHO05D008168 2.1e-28 129.0 127 63.0
Sabra07G0023900 Salix brachista HOM05D007518 ORTHO05D008168 2.7e-28 128.6 127 64.6
TWI53G0381 Tripterygium wilfordii HOM05D007518 ORTHO05D008168 3.6e-28 128.3 129 64.3
Atru.chr3.555 Acer truncatum HOM05D007518 ORTHO05D008168 6.1e-28 127.5 130 63.1
Nn1g05049 Nelumbo nucifera HOM05D007518 ORTHO05D008168 6.1e-28 127.5 127 66.1
FvH4_1g13510 Fragaria vesca HOM05D007518 ORTHO05D008168 8.0e-28 127.1 128 64.8
FAN19G2612 Fragaria x ananassa HOM05D007518 ORTHO05D008168 8.0e-28 127.1 128 64.8
Gohir.A02G164600 Gossypium hirsutum HOM05D007518 ORTHO05D008168 1.0e-27 126.7 127 61.4
Gohir.D03G015500 Gossypium hirsutum HOM05D007518 ORTHO05D008168 1.0e-27 126.7 127 61.4
Gorai.003G015700 Gossypium raimondii HOM05D007518 ORTHO05D008168 1.0e-27 126.7 127 61.4
Rhsim10G0067800 Rhododendron simsii HOM05D007518 ORTHO05D008168 1.0e-27 126.7 127 63.8
FAN28G1656 Fragaria x ananassa HOM05D007518 ORTHO05D008168 1.4e-27 126.3 128 64.1
RcHm_v2.0_Chr2g0101891 Rosa chinensis HOM05D007518 ORTHO05D008168 2.3e-27 125.6 128 64.8
MD02G1150400 Malus domestica HOM05D007518 ORTHO05D008168 3.0e-27 125.2 127 65.4
Aqoxy6G01075 Aquilegia oxysepala HOM05D007518 ORTHO05D008168 4.0e-27 124.8 127 63.8
MBI16_g37747_MAGBIO Magnolia biondii HOM05D007518 ORTHO05D008168 4.0e-27 124.8 128 62.5
Cc07_g09360 Coffea canephora HOM05D007518 ORTHO05D008168 5.2e-27 124.4 127 64.6
DCAR_021444 Daucus carota HOM05D007518 ORTHO05D008168 5.2e-27 124.4 129 65.1
MD15G1264900 Malus domestica HOM05D007518 ORTHO05D008168 8.8e-27 123.6 127 65.4
Nitab4.5_0016476g0010 Nicotiana tabacum HOM05D007518 ORTHO05D008168 2.0e-26 122.5 127 63.8
Oeu007443.1 Olea europaea HOM05D007518 ORTHO05D008168 4.4e-26 121.3 127 63.8
PSO541G1957 Papaver somniferum HOM05D007518 ORTHO05D008168 4.4e-26 121.3 129 63.6
THA.LOC104821280 Tarenaya hassleriana HOM05D007518 ORTHO05D008168 4.4e-26 121.3 127 61.4
PSO675G1394 Papaver somniferum HOM05D007518 ORTHO05D008168 5.7e-26 120.9 129 63.6
Potri.007G027400 Populus trichocarpa HOM05D007518 ORTHO05D008168 5.7e-26 120.9 127 59.8
Thhalv10010782m.g Eutrema salsugineum HOM05D007518 ORTHO05D008168 7.5e-26 120.6 126 61.9
Solyc03g034070.1 Solanum lycopersicum HOM05D007518 ORTHO05D008168 7.5e-26 120.6 114 65.8
Sopen03g006850 Solanum pennellii HOM05D007518 ORTHO05D008168 7.5e-26 120.6 114 65.8
Migut.L00282 Erythranthe guttata HOM05D007518 ORTHO05D008168 9.7e-26 120.2 124 60.5
HanXRQChr16g0530261 Helianthus annuus HOM05D007518 ORTHO05D008168 9.7e-26 120.2 131 62.6
Aa31LG4G18840 Aethionema arabicum HOM05D007518 ORTHO05D008168 1.3e-25 119.8 126 61.1
Peaxi162Scf00751g00045 Petunia axillaris HOM05D007518 ORTHO05D008168 1.3e-25 119.8 119 58.0
CANSAT01G2215 Cannabis sativa HOM05D007518 ORTHO05D008168 1.7e-25 119.4 130 62.3
Manes.01G134000 Manihot esculenta HOM05D007518 ORTHO05D008168 1.7e-25 119.4 127 58.3
Ah.03g139360 Amaranthus hybridus HOM05D007518 ORTHO05D008168 2.2e-25 119.0 128 64.1
AUR62003171 Chenopodium quinoa HOM05D007518 ORTHO05D008168 2.8e-25 118.6 116 68.1
PGSC0003DMG400017778 Solanum tuberosum HOM05D007518 ORTHO05D008168 2.8e-25 118.6 127 60.6
Lsat_1_v5_gn_3_78660 Lactuca sativa HOM05D007518 ORTHO05D008168 4.8e-25 117.9 131 61.1
C05p06340 Brassica napus HOM05D007518 ORTHO05D008168 6.3e-25 117.5 126 60.3
Carub.0005s1701 Capsella rubella HOM05D007518 ORTHO05D008168 6.3e-25 117.5 126 61.1
CAN.G1028.6 Capsicum annuum HOM05D007518 ORTHO05D008168 6.3e-25 117.5 127 59.8
AUR62007988 Chenopodium quinoa HOM05D006571 ORTHO05D007771 6.3e-25 117.5 116 67.2
Sp5g11540 Schrenkiella parvula HOM05D007518 ORTHO05D008168 1.1e-24 116.7 126 61.9
Sc03g0000780 Simmondsia chinensis HOM05D007518 ORTHO05D008168 1.4e-24 116.3 127 61.4
AL5G30840 Arabidopsis lyrata HOM05D007518 ORTHO05D008168 1.8e-24 115.9 126 60.3
A06p05270 Brassica napus HOM05D007518 ORTHO05D008168 1.8e-24 115.9 126 60.3
BolC5t29390H Brassica oleracea HOM05D007518 ORTHO05D008168 1.8e-24 115.9 126 60.3
BraA06t23735Z Brassica rapa HOM05D007518 ORTHO05D008168 1.8e-24 115.9 126 60.3
Duzib187G0536 Durio zibethinus HOM05D007518 ORTHO05D008168 1.8e-24 115.9 105 71.4
AT3G50685 Arabidopsis thaliana HOM05D007518 ORTHO05D008168 5.3e-24 114.4 126 59.5
Pp3c15_7720 Physcomitrium patens HOM05D007518 ORTHO05D008168 3.5e-23 111.7 111 58.6
Nitab4.5_0001038g0130 Nicotiana tabacum HOM05D007518 ORTHO05D008168 4.5e-23 111.3 127 59.8
unitig_62.g23458 Utricularia gibba HOM05D007518 ORTHO05D008168 4.5e-23 111.3 124 55.6
ECA246G0481 Erigeron canadensis HOM05D000085 ORTHO05D000274 5.9e-23 110.9 111 65.8
CARHR160200 Cardamine hirsuta HOM05D007518 ORTHO05D008168 7.7e-23 110.5 126 57.1
CBR_g37409 Chara braunii HOM05D007518 ORTHO05D008168 2.2e-22 109.0 113 53.1
Mapoly0168s0019 Marchantia polymorpha HOM05D007518 ORTHO05D008168 3.8e-22 108.2 111 62.2
BcaB07g34066 Brassica carinata HOM05D007518 ORTHO05D008168 1.9e-21 105.9 121 48.8
SGA_v2.0_scaffold248G44914 Striga asiatica HOM05D007518 ORTHO05D008168 2.5e-21 105.5 127 56.7
Actinidia12117 Actinidia chinensis HOM05D007518 ORTHO05D008168 3.2e-21 105.1 63 77.8
SMO361G0359 Selaginella moellendorffii HOM05D007518 ORTHO05D008168 1.6e-20 102.8 113 55.8
ATR0733G025 Amborella trichopoda HOM05D007518 ORTHO05D008168 6.1e-20 100.9 125 52.8
SEGI_19868 Sequoiadendron giganteum HOM05D007518 ORTHO05D008168 2.3e-19 99.0 111 59.5
Actinidia02774 Actinidia chinensis HOM05D007518 ORTHO05D008168 3.0e-19 98.6 106 52.8
Dinv26823 Davidia involucrata HOM05D002420 ORTHO05D002422 3.4e-18 95.1 120 55.8
BcaB07g34065 Brassica carinata HOM05D007518 ORTHO05D008168 9.8e-18 93.6 62 72.6
HPP92_023606 Vanilla planifolia HOM05D007518 ORTHO05D008168 1.6e-15 86.3 116 52.6
AagrBONN_evm.TU.Sc2ySwM_228.2926 Anthoceros agrestis HOM05D007518 ORTHO05D008168 1.3e-14 83.2 112 54.5
SMO361G0415 Selaginella moellendorffii HOM05D007518 ORTHO05D008168 2.9e-14 82.0 78 51.3
Zm00001eb098970 Zea mays HOM05D007518 ORTHO05D008168 3.8e-14 81.6 117 53.0
PRCOL_00004191 Prasinoderma coloniale HOM05D007518 ORTHO05D008168 2.5e-13 79.0 114 49.1
unitig_65.g29889 Utricularia gibba HOM05D007518 ORTHO05D008168 3.0e-11 72.0 106 49.1
Cre01.g043200 Chlamydomonas reinhardtii HOM05D007518 ORTHO05D008168 6.8e-11 70.9 61 57.4
MCO12G314 Micromonas commoda HOM05D007518 ORTHO05D008168 7.5e-10 67.4 39 71.8
Os10g0213700 Oryza sativa ssp. japonica HOM05D007518 ORTHO05D008168 2.0e-07 59.3 117 46.2
Atru.chr4.788 Acer truncatum HOM05D007518 ORTHO05D008168 5.9e-07 57.8 34 82.4


User provided reference genes

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