Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_00351_v3 Cicer arietinum L. HOM05D008668 ORTHO05D010653 6.2e-103 377.5 192 100.0
TPR.G16527 Trifolium pratense HOM05D008668 ORTHO05D010653 2.0e-77 292.7 191 78.5
Medtr2g014250 Medicago truncatula HOM05D008668 ORTHO05D010653 2.1e-74 282.7 193 77.2
Psat1g203600 Pisum sativum HOM05D008668 ORTHO05D010653 3.4e-69 265.4 193 74.6
Glyma.13G236900 Glycine max HOM05D008668 ORTHO05D010653 1.5e-61 240.0 186 71.0
Glyma.15G076600 Glycine max HOM05D008668 ORTHO05D010653 3.2e-59 232.3 183 70.5
Lj6g0024090 Lotus japonicus HOM05D008668 ORTHO05D010653 3.2e-59 232.3 191 67.5
Phvul.006G183500 Phaseolus vulgaris HOM05D008668 ORTHO05D010653 1.8e-33 146.7 174 51.7
Lj4g0022764 Lotus japonicus HOM05D008668 ORTHO05D010653 1.8e-30 136.7 194 47.4
VMungo0251G3566 Vigna mungo HOM05D008668 ORTHO05D010653 1.6e-29 133.7 184 48.9
Psat0s1495g0120 Pisum sativum HOM05D008668 ORTHO05D010653 1.0e-28 131.0 187 43.9
Glyma.07G199300 Glycine max HOM05D008668 ORTHO05D010653 2.9e-28 129.4 187 47.6
Glyma.13G177100 Glycine max HOM05D008668 ORTHO05D010653 5.0e-28 128.6 188 46.8
TPR.G16328 Trifolium pratense HOM05D008668 ORTHO05D010653 6.5e-28 128.3 192 44.8
Ca_18577_v3 Cicer arietinum L. HOM05D008668 ORTHO05D010653 1.9e-27 126.7 179 47.5
Medtr4g088510 Medicago truncatula HOM05D008668 ORTHO05D010653 6.1e-26 121.7 189 47.1
Lalb_Chr16g0383941 Lupinus albus HOM05D008668 ORTHO05D010653 1.4e-22 110.5 197 41.1
Thecc.06G183300 Theobroma cacao HOM05D008668 ORTHO05D010653 1.6e-21 107.1 197 40.1
Prupe.4G050900 Prunus persica HOM05D008668 ORTHO05D010653 9.5e-19 97.8 189 38.1
QL05p041791 Quercus lobata HOM05D008668 ORTHO05D010653 4.7e-18 95.5 189 39.7
Lalb_Chr09g0327791 Lupinus albus HOM05D008668 ORTHO05D010653 1.2e-16 90.9 204 38.7
COL.COLO4_31435 Corchorus olitorius HOM05D008668 ORTHO05D010653 1.3e-15 87.4 189 39.2
Dinv17338 Davidia involucrata HOM05D008668 ORTHO05D010653 1.7e-15 87.0 192 37.5
Eucgr.E03256 Eucalyptus grandis HOM05D008668 ORTHO05D010653 3.7e-15 85.9 187 35.8
arahy.Tifrunner.gnm1.ann1.Q1M9Z3 Arachis hypogaea HOM05D008668 ORTHO05D010653 1.4e-14 84.0 100 55.0
Ciclev10017813m.g Citrus clementina HOM05D008668 ORTHO05D010653 1.3e-12 77.4 186 34.4
FAN21G3728 Fragaria x ananassa HOM05D008668 ORTHO05D010653 1.3e-12 77.4 166 35.5
FAN25G1913 Fragaria x ananassa HOM05D008668 ORTHO05D010653 1.7e-12 77.0 166 35.5
Cfa000511 Carpinus fangiana HOM05D008668 ORTHO05D010653 2.3e-12 76.6 191 32.5
FvH4_3g08820 Fragaria vesca HOM05D008668 ORTHO05D010653 6.6e-12 75.1 168 36.3
FAN11G1694 Fragaria x ananassa HOM05D008668 ORTHO05D010653 6.6e-12 75.1 168 36.3
Haze_06401 Corylus avellana HOM05D008668 ORTHO05D010653 8.6e-12 74.7 189 32.8
FAN16G1191 Fragaria x ananassa HOM05D008668 ORTHO05D010653 5.6e-11 72.0 166 34.3
Gohir.D10G027650 Gossypium hirsutum HOM05D008668 ORTHO05D010653 1.2e-10 70.9 187 31.0
Gorai.011G029500 Gossypium raimondii HOM05D008668 ORTHO05D010653 1.6e-10 70.5 187 31.0
Gohir.A10G027250 Gossypium hirsutum HOM05D008668 ORTHO05D010653 2.1e-10 70.1 189 30.7
Cpa.g.sc373.2 Carica papaya HOM05D008668 ORTHO05D010653 4.7e-10 68.9 173 35.3
Dinv40588 Davidia involucrata HOM05D008668 ORTHO05D010653 6.1e-10 68.6 182 36.8
Manes.17G048000 Manihot esculenta HOM05D008668 ORTHO05D010653 3.4e-08 62.8 183 32.2
CSS0028958 Camellia sinensis var. sinensis HOM05D008668 ORTHO05D010653 2.2e-07 60.1 192 29.7
CSS0023827 Camellia sinensis var. sinensis HOM05D008668 ORTHO05D010653 1.1e-06 57.8 192 29.2
Actinidia07593 Actinidia chinensis HOM05D008668 ORTHO05D010653 5.4e-06 55.5 191 29.8


User provided reference genes

Program Settings