Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_00350_v3 Cicer arietinum L. HOM05D003630 ORTHO05D004151 7.6e-53 210.3 112 100.0
TPR.G16501 Trifolium pratense HOM05D003630 ORTHO05D004151 4.1e-46 188.0 113 89.4
Medtr2g014240 Medicago truncatula HOM05D003630 ORTHO05D004151 6.9e-46 187.2 113 90.3
Lj6g0013661 Lotus japonicus HOM05D003630 ORTHO05D004151 1.0e-41 173.3 112 78.6
arahy.Tifrunner.gnm1.ann1.H8XLFU Arachis hypogaea HOM05D003630 ORTHO05D004151 9.7e-40 166.8 112 75.0
arahy.Tifrunner.gnm1.ann1.S1G93A Arachis hypogaea HOM05D003630 ORTHO05D004151 9.7e-40 166.8 112 75.0
Psat1g203680 Pisum sativum HOM05D003630 ORTHO05D004151 2.2e-39 165.6 100 87.0
Lalb_Chr15g0089711 Lupinus albus HOM05D003630 ORTHO05D004151 2.4e-38 162.2 113 76.1
Phvul.006G183600 Phaseolus vulgaris HOM05D003630 ORTHO05D004151 5.3e-38 161.0 115 76.5
Lalb_Chr18g0059451 Lupinus albus HOM05D003630 ORTHO05D004151 3.4e-37 158.3 114 75.4
VMungo0540G1118 Vigna mungo HOM05D003630 ORTHO05D004151 5.9e-37 157.5 115 75.7
Duzib160G0312 Durio zibethinus HOM05D003630 ORTHO05D004151 3.2e-35 151.8 113 73.5
ATR0752G193 Amborella trichopoda HOM05D003630 ORTHO05D004151 2.1e-34 149.1 120 69.2
Glyma.13G237000 Glycine max HOM05D003630 ORTHO05D004151 6.1e-34 147.5 113 72.6
CiPaw.09G062300 Carya illinoinensis HOM05D003630 ORTHO05D004151 3.0e-33 145.2 117 69.2
Gohir.A05G159800 Gossypium hirsutum HOM05D003630 ORTHO05D004151 3.0e-33 145.2 117 60.7
arahy.Tifrunner.gnm1.ann1.Q5B35H Arachis hypogaea HOM05D003630 ORTHO05D004151 5.1e-33 144.4 120 69.2
RcHm_v2.0_Chr5g0008921 Rosa chinensis HOM05D003630 ORTHO05D004151 5.1e-33 144.4 113 72.6
Prupe.4G050800 Prunus persica HOM05D003630 ORTHO05D004151 8.8e-33 143.7 115 72.2
Gohir.D05G162500 Gossypium hirsutum HOM05D003630 ORTHO05D004151 1.5e-32 142.9 117 59.8
Sed0024812 Sechium edule HOM05D003630 ORTHO05D004151 1.5e-32 142.9 114 69.3
Sed0001316 Sechium edule HOM05D003630 ORTHO05D004151 2.0e-32 142.5 112 59.8
SalBow8G2511 Salvia bowleyana HOM05D003630 ORTHO05D004151 3.3e-32 141.7 113 59.3
CiPaw.10G051200 Carya illinoinensis HOM05D003630 ORTHO05D004151 4.4e-32 141.4 120 64.2
ClCG01G023140 Citrullus lanatus HOM05D003630 ORTHO05D004151 4.4e-32 141.4 119 68.1
Glyma.15G076500 Glycine max HOM05D003630 ORTHO05D004151 4.4e-32 141.4 116 71.6
Nn1g04163 Nelumbo nucifera HOM05D003630 ORTHO05D004151 5.7e-32 141.0 118 68.6
Cpa.g.sc373.3 Carica papaya HOM05D003630 ORTHO05D004151 7.4e-32 140.6 119 68.9
Sed0017838 Sechium edule HOM05D003630 ORTHO05D004151 1.3e-31 139.8 119 68.1
CsaV3_6G050280 Cucumis sativus L. HOM05D003630 ORTHO05D004151 1.7e-31 139.4 119 68.1
arahy.Tifrunner.gnm1.ann1.RY2Y1Z Arachis hypogaea HOM05D003630 ORTHO05D004151 3.7e-31 138.3 120 67.5
Cc02_g13650 Coffea canephora HOM05D003630 ORTHO05D004151 3.7e-31 138.3 124 62.9
Gohir.A06G129700 Gossypium hirsutum HOM05D003630 ORTHO05D004151 3.7e-31 138.3 114 70.2
Gohir.D06G133900 Gossypium hirsutum HOM05D003630 ORTHO05D004151 3.7e-31 138.3 114 70.2
Actinidia07592 Actinidia chinensis HOM05D003630 ORTHO05D004151 1.4e-30 136.3 121 65.3
FAN16G2355 Fragaria x ananassa HOM05D003630 ORTHO05D004151 2.4e-30 135.6 112 70.5
FAN25G0655 Fragaria x ananassa HOM05D003630 ORTHO05D004151 2.4e-30 135.6 112 70.5
Manes.17G047900 Manihot esculenta HOM05D003630 ORTHO05D004151 2.4e-30 135.6 116 66.4
CSS0035295 Camellia sinensis var. sinensis HOM05D003630 ORTHO05D004151 3.1e-30 135.2 121 63.6
TWI38G1513 Tripterygium wilfordii HOM05D003630 ORTHO05D004151 3.1e-30 135.2 117 67.5
TAR624G0603 Trochodendron aralioides HOM05D003630 ORTHO05D004151 3.1e-30 135.2 116 57.8
MELO3C002620.2 Cucumis melo HOM05D003630 ORTHO05D004151 5.3e-30 134.4 112 58.9
Migut.M01120 Erythranthe guttata HOM05D003630 ORTHO05D004151 5.3e-30 134.4 122 55.7
Hma1.2p1_0208F.1_g088370 Hydrangea macrophylla HOM05D003630 ORTHO05D004151 5.3e-30 134.4 124 62.1
Lalb_Chr09g0327781 Lupinus albus HOM05D003630 ORTHO05D004151 5.3e-30 134.4 116 61.2
CsaV3_1G012460 Cucumis sativus L. HOM05D003630 ORTHO05D004151 6.9e-30 134.0 112 58.9
PGR042G3375 Punica granatum HOM05D003630 ORTHO05D004151 6.9e-30 134.0 115 69.6
Oeu056100.2 Olea europaea HOM05D003630 ORTHO05D004151 1.2e-29 133.3 118 63.6
Solyc03g006360.3 Solanum lycopersicum HOM05D003630 ORTHO05D004151 2.0e-29 132.5 129 58.1
Carub.0001s2678 Capsella rubella HOM05D003630 ORTHO05D004151 2.6e-29 132.1 120 61.7
Oeu012144.1 Olea europaea HOM05D003630 ORTHO05D004151 2.6e-29 132.1 121 61.2
MSTRG.15866 Avicennia marina HOM05D003630 ORTHO05D004151 3.4e-29 131.7 118 62.7
PGSC0003DMG400012826 Solanum tuberosum HOM05D003630 ORTHO05D004151 3.4e-29 131.7 129 59.7
Dinv17335 Davidia involucrata HOM05D003630 ORTHO05D004151 4.5e-29 131.3 121 64.5
Migut.H01476 Erythranthe guttata HOM05D003630 ORTHO05D004151 4.5e-29 131.3 121 63.6
FvH4_3g08830 Fragaria vesca HOM05D003630 ORTHO05D004151 4.5e-29 131.3 115 68.7
FAN11G3953 Fragaria x ananassa HOM05D003630 ORTHO05D004151 4.5e-29 131.3 115 68.7
Oeu029367.1 Olea europaea HOM05D003630 ORTHO05D004151 4.5e-29 131.3 117 61.5
QL05p041782 Quercus lobata HOM05D003630 ORTHO05D004151 4.5e-29 131.3 118 62.7
MBI02_g32444_MAGBIO Magnolia biondii HOM05D003630 ORTHO05D004151 5.9e-29 131.0 124 61.3
unitig_749.g13657 Utricularia gibba HOM05D003630 ORTHO05D004151 5.9e-29 131.0 119 62.2
GSVIVG01021092001 Vitis vinifera HOM05D003630 ORTHO05D004151 1.0e-28 130.2 118 68.6
MSTRG.13203 Avicennia marina HOM05D003630 ORTHO05D004151 1.3e-28 129.8 117 63.2
ClCG03G008090 Citrullus lanatus HOM05D003630 ORTHO05D004151 1.3e-28 129.8 112 57.1
vmacro15923 Vaccinium macrocarpon HOM05D003630 ORTHO05D004151 1.3e-28 129.8 122 56.6
TAR626G1897 Trochodendron aralioides HOM05D003630 ORTHO05D004151 1.7e-28 129.4 119 66.4
FAN21G0750 Fragaria x ananassa HOM05D003630 ORTHO05D004151 2.9e-28 128.6 112 67.9
BcaB07g32449 Brassica carinata HOM05D003630 ORTHO05D004151 5.0e-28 127.9 117 57.3
CANSAT35G1140 Cannabis sativa HOM05D003630 ORTHO05D004151 5.0e-28 127.9 124 62.9
THA.LOC104812301 Tarenaya hassleriana HOM05D003630 ORTHO05D004151 6.5e-28 127.5 116 64.7
DCAR_003387 Daucus carota HOM05D003630 ORTHO05D004151 8.5e-28 127.1 117 62.4
ECA236G4733 Erigeron canadensis HOM05D003630 ORTHO05D004151 8.5e-28 127.1 117 60.7
Thhalv10009086m.g Eutrema salsugineum HOM05D003630 ORTHO05D004151 8.5e-28 127.1 123 61.0
Thecc.06G183500 Theobroma cacao HOM05D003630 ORTHO05D004151 8.5e-28 127.1 106 70.8
BcaC05g26841 Brassica carinata HOM05D003630 ORTHO05D004151 1.4e-27 126.3 117 55.6
CSS0033873 Camellia sinensis var. sinensis HOM05D003630 ORTHO05D004151 1.9e-27 125.9 103 67.0
CiPaw.04G030300 Carya illinoinensis HOM05D003630 ORTHO05D004151 1.9e-27 125.9 108 67.6
CDE11G0243 Ceratophyllum demersum HOM05D003630 ORTHO05D004151 1.9e-27 125.9 116 62.1
Cfa000510 Carpinus fangiana HOM05D003630 ORTHO05D004151 4.2e-27 124.8 108 69.4
SGA_v2.0_scaffold100G29703 Striga asiatica HOM05D003630 ORTHO05D004151 4.2e-27 124.8 119 63.0
PGR004G0839 Punica granatum HOM05D003630 ORTHO05D004151 5.5e-27 124.4 124 62.9
CSS0037340 Camellia sinensis var. sinensis HOM05D003630 ORTHO05D004151 1.2e-26 123.2 106 63.2
PGSC0003DMG400029732 Solanum tuberosum HOM05D003630 ORTHO05D004151 1.2e-26 123.2 118 56.8
Nitab4.5_0003487g0100 Nicotiana tabacum HOM05D003630 ORTHO05D004151 1.6e-26 122.9 124 59.7
Nitab4.5_0000516g0130 Nicotiana tabacum HOM05D003630 ORTHO05D004151 3.6e-26 121.7 123 60.2
Solyc02g077880.3 Solanum lycopersicum HOM05D003630 ORTHO05D004151 4.7e-26 121.3 118 56.8
Sopen02g022730 Solanum pennellii HOM05D003630 ORTHO05D004151 4.7e-26 121.3 118 56.8
MELO3C007269.2 Cucumis melo HOM05D003630 ORTHO05D004151 8.0e-26 120.6 107 68.2
Os11g0671000 Oryza sativa ssp. japonica HOM05D003630 ORTHO05D004151 8.0e-26 120.6 126 57.9
HPP92_018482 Vanilla planifolia HOM05D003630 ORTHO05D004151 1.0e-25 120.2 122 56.6
AUR62017046 Chenopodium quinoa HOM05D003630 ORTHO05D004151 1.4e-25 119.8 120 60.0
HPP92_018480 Vanilla planifolia HOM05D003630 ORTHO05D004151 1.4e-25 119.8 122 56.6
AUR62014851 Chenopodium quinoa HOM05D003630 ORTHO05D004151 1.8e-25 119.4 120 60.0
HanXRQChr01g0003821 Helianthus annuus HOM05D003630 ORTHO05D004151 1.8e-25 119.4 113 57.5
Aqoxy1G02347 Aquilegia oxysepala HOM05D003630 ORTHO05D004151 2.3e-25 119.0 117 55.6
Haze_06402 Corylus avellana HOM05D003630 ORTHO05D004151 2.3e-25 119.0 110 64.5
Gorai.010G155600 Gossypium raimondii HOM05D003630 ORTHO05D004151 2.3e-25 119.0 104 69.2
Dinv40586 Davidia involucrata HOM05D003630 ORTHO05D004151 5.2e-25 117.9 108 65.7
Ah.09g237490 Amaranthus hybridus HOM05D003630 ORTHO05D004151 6.7e-25 117.5 121 56.2
CDE05G2086 Ceratophyllum demersum HOM05D003630 ORTHO05D004151 6.7e-25 117.5 116 58.6
Potri.004G047100 Populus trichocarpa HOM05D003630 ORTHO05D004151 6.7e-25 117.5 112 66.1
HanXRQChr04g0123791 Helianthus annuus HOM05D003630 ORTHO05D004151 8.8e-25 117.1 112 59.8
HPP92_014190 Vanilla planifolia HOM05D003630 ORTHO05D004151 1.1e-24 116.7 116 48.3
EL10Ac8g20421 Beta vulgaris HOM05D003630 ORTHO05D004151 2.6e-24 115.5 123 56.9
A02p28330 Brassica napus HOM05D003630 ORTHO05D004151 5.7e-24 114.4 123 53.7
Peaxi162Scf01100g00009 Petunia axillaris HOM05D003630 ORTHO05D004151 7.4e-24 114.0 118 59.3
Sp2g09130 Schrenkiella parvula HOM05D003630 ORTHO05D004151 7.4e-24 114.0 123 55.3
Duzib235G1039 Durio zibethinus HOM05D003630 ORTHO05D004151 1.3e-23 113.2 108 63.0
C02p44910 Brassica napus HOM05D003630 ORTHO05D004151 1.7e-23 112.8 123 54.5
BolC2t10526H Brassica oleracea HOM05D003630 ORTHO05D004151 1.7e-23 112.8 123 54.5
BraA02t07868Z Brassica rapa HOM05D003630 ORTHO05D004151 1.7e-23 112.8 123 54.5
TWI38G1867 Tripterygium wilfordii HOM05D003630 ORTHO05D004151 1.7e-23 112.8 106 67.0
CARHR178890 Cardamine hirsuta HOM05D003630 ORTHO05D004151 3.7e-23 111.7 118 60.2
Thhalv10003427m.g Eutrema salsugineum HOM05D003630 ORTHO05D004151 3.7e-23 111.7 122 52.5
Gorai.009G167500 Gossypium raimondii HOM05D003630 ORTHO05D004151 4.8e-23 111.3 100 57.0
Sp4g16220 Schrenkiella parvula HOM05D003630 ORTHO05D004151 6.3e-23 110.9 110 51.8
AT1G28330 Arabidopsis thaliana HOM05D003630 ORTHO05D004151 8.2e-23 110.5 109 57.8
AT2G33830 Arabidopsis thaliana HOM05D003630 ORTHO05D004151 8.2e-23 110.5 114 51.8
AT5G44300 Arabidopsis thaliana HOM05D003630 ORTHO05D004151 8.2e-23 110.5 114 51.8
BcaB02g10597 Brassica carinata HOM05D003630 ORTHO05D004151 8.2e-23 110.5 115 51.3
Sopen03g002370 Solanum pennellii HOM05D003630 ORTHO05D004151 1.1e-22 110.2 122 57.4
Aa31sc86G60 Aethionema arabicum HOM05D003630 ORTHO05D004151 1.4e-22 109.8 105 56.2
AL1G41920 Arabidopsis lyrata HOM05D003630 ORTHO05D004151 1.4e-22 109.8 117 53.8
Carub.0004s1550 Capsella rubella HOM05D003630 ORTHO05D004151 1.8e-22 109.4 110 50.9
PSO541G4117 Papaver somniferum HOM05D003630 ORTHO05D004151 1.8e-22 109.4 121 55.4
Aa31sc652G110 Aethionema arabicum HOM05D003630 ORTHO05D004151 2.4e-22 109.0 110 49.1
Aa31sc652G20 Aethionema arabicum HOM05D003630 ORTHO05D004151 2.4e-22 109.0 110 49.1
A03p18920 Brassica napus HOM05D003630 ORTHO05D004151 2.4e-22 109.0 111 50.5
AL8G15690 Arabidopsis lyrata HOM05D003630 ORTHO05D004151 3.1e-22 108.6 114 50.9
Ciclev10017162m.g Citrus clementina HOM05D003630 ORTHO05D004151 4.1e-22 108.2 110 65.5
COL.COLO4_31436 Corchorus olitorius HOM05D003630 ORTHO05D004151 4.1e-22 108.2 107 65.4
Lsat_1_v5_gn_7_20981 Lactuca sativa HOM05D003630 ORTHO05D004151 4.1e-22 108.2 103 57.3
C04p15210 Brassica napus HOM05D003630 ORTHO05D004151 5.3e-22 107.8 115 49.6
BolC4t23094H Brassica oleracea HOM05D003630 ORTHO05D004151 5.3e-22 107.8 115 49.6
DCAR_008021 Daucus carota HOM05D003630 ORTHO05D004151 5.3e-22 107.8 120 55.8
A05p11750 Brassica napus HOM05D003630 ORTHO05D004151 7.0e-22 107.5 115 49.6
BraA05t20119Z Brassica rapa HOM05D003630 ORTHO05D004151 7.0e-22 107.5 115 49.6
Manes.16G030000 Manihot esculenta HOM05D003630 ORTHO05D004151 7.0e-22 107.5 105 62.9
Atru.chr10.1820 Acer truncatum HOM05D003630 ORTHO05D004151 9.1e-22 107.1 108 61.1
Atru.chr10.1837 Acer truncatum HOM05D003630 ORTHO05D004151 9.1e-22 107.1 108 61.1
BcaB01g03917 Brassica carinata HOM05D003630 ORTHO05D004151 9.1e-22 107.1 110 50.0
BcaC01g05821 Brassica carinata HOM05D003630 ORTHO05D004151 9.1e-22 107.1 110 50.0
BcaC01g05822 Brassica carinata HOM05D003630 ORTHO05D004151 9.1e-22 107.1 110 50.0
BraA03t11151Z Brassica rapa HOM05D003630 ORTHO05D004151 9.1e-22 107.1 110 50.0
Thhalv10017461m.g Eutrema salsugineum HOM05D003630 ORTHO05D004151 9.1e-22 107.1 110 51.8
AL4G29600 Arabidopsis lyrata HOM05D003630 ORTHO05D004151 1.2e-21 106.7 108 51.9
BcaC02g11461 Brassica carinata HOM05D003630 ORTHO05D004151 1.2e-21 106.7 115 49.6
A09p37730 Brassica napus HOM05D003630 ORTHO05D004151 1.2e-21 106.7 115 52.2
C05p27220 Brassica napus HOM05D003630 ORTHO05D004151 1.2e-21 106.7 115 52.2
BraA09t39285Z Brassica rapa HOM05D003630 ORTHO05D004151 1.2e-21 106.7 115 52.2
Carub.0008s0422 Capsella rubella HOM05D003630 ORTHO05D004151 1.2e-21 106.7 115 51.3
Rhsim02G0132700 Rhododendron simsii HOM05D003630 ORTHO05D004151 1.2e-21 106.7 112 52.7
SEGI_31386 Sequoiadendron giganteum HOM05D003630 ORTHO05D004151 1.2e-21 106.7 135 48.1
Aa31LG9G8870 Aethionema arabicum HOM05D003630 ORTHO05D004151 2.0e-21 105.9 114 47.4
CARHR027820 Cardamine hirsuta HOM05D003630 ORTHO05D004151 2.0e-21 105.9 118 52.5
THA.LOC104814224 Tarenaya hassleriana HOM05D003630 ORTHO05D004151 2.6e-21 105.5 110 57.3
BolC5t31435H Brassica oleracea HOM05D003630 ORTHO05D004151 3.5e-21 105.1 115 50.4
Lsat_1_v5_gn_1_124360 Lactuca sativa HOM05D003630 ORTHO05D004151 3.5e-21 105.1 99 54.5
Sp1g24570 Schrenkiella parvula HOM05D003630 ORTHO05D004151 3.5e-21 105.1 106 57.5
BolC3t14590H Brassica oleracea HOM05D003630 ORTHO05D004151 7.7e-21 104.0 116 49.1
CARHR127940 Cardamine hirsuta HOM05D003630 ORTHO05D004151 5.0e-20 101.3 111 46.8
Sed0007569 Sechium edule HOM05D003630 ORTHO05D004151 8.5e-20 100.5 99 55.6
Sc24g0001020 Simmondsia chinensis HOM05D003630 ORTHO05D004151 3.2e-19 98.6 108 52.8
PSO675G3190 Papaver somniferum HOM05D003630 ORTHO05D004151 1.6e-18 96.3 112 52.7
Sabra04G0029500 Salix brachista HOM05D003630 ORTHO05D004151 1.6e-18 96.3 109 58.7
BcaC03g16649 Brassica carinata HOM05D003630 ORTHO05D004151 3.0e-17 92.0 111 51.4
Pp3c15_6160 Physcomitrium patens HOM05D003630 ORTHO05D004151 2.0e-16 89.4 148 35.8
ECA248G1596 Erigeron canadensis HOM05D000885 ORTHO05D008875 7.5e-16 87.4 84 60.7
BcaB07g30534 Brassica carinata HOM05D003630 ORTHO05D004151 1.7e-15 86.3 107 49.5
CAN.G529.26 Capsicum annuum HOM05D003630 ORTHO05D004151 2.2e-15 85.9 54 74.1
C03p22060 Brassica napus HOM05D003630 ORTHO05D004151 3.7e-15 85.1 104 46.2
Sc17g0006070 Simmondsia chinensis HOM05D003630 ORTHO05D004151 1.8e-14 82.8 109 51.4
MD14G1054500 Malus domestica HOM05D003630 ORTHO05D004151 2.4e-14 82.4 93 50.5
Mapoly0057s0054 Marchantia polymorpha HOM05D003630 ORTHO05D004151 5.3e-14 81.3 139 33.1
AagrBONN_evm.TU.Sc2ySwM_228.5600 Anthoceros agrestis HOM05D003630 ORTHO05D004151 1.6e-13 79.7 148 36.5
SMO343G0126 Selaginella moellendorffii HOM05D003630 ORTHO05D004151 8.5e-12 73.9 155 32.9
SMO367G0919 Selaginella moellendorffii HOM05D003630 ORTHO05D004151 1.5e-11 73.2 115 40.0
AagrBONN_evm.TU.Sc2ySwM_362.1976 Anthoceros agrestis HOM05D003630 ORTHO05D004151 2.3e-09 65.9 60 53.3
Aa31LG9G7730 Aethionema arabicum HOM05D003630 ORTHO05D004151 5.7e-08 61.2 84 40.5
Pp3c24_1050 Physcomitrium patens HOM05D003630 ORTHO05D004151 6.3e-07 57.8 153 28.1
COL.COLO4_29750 Corchorus olitorius HOM05D003630 ORTHO05D004151 1.4e-06 56.6 41 63.4
Eucgr.E03257 Eucalyptus grandis HOM05D003630 ORTHO05D004151 2.4e-06 55.8 41 68.3
Pp3c10_24000 Physcomitrium patens HOM05D003630 ORTHO05D004151 5.4e-06 54.7 153 27.5


User provided reference genes

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