Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_00329_v3 Cicer arietinum L. HOM05D004233 ORTHO05D003507 1.1e-60 236.5 121 100.0
Medtr2g013470 Medicago truncatula HOM05D004233 ORTHO05D003507 4.5e-43 177.9 122 78.7
TPR.G29052 Trifolium pratense HOM05D004233 ORTHO05D003507 4.7e-40 167.9 128 78.1
Glyma.15G073400 Glycine max HOM05D004233 ORTHO05D003507 1.8e-36 156.0 123 73.2
Glyma.13G239800 Glycine max HOM05D004233 ORTHO05D003507 9.2e-36 153.7 123 71.5
Lj6g0009965 Lotus japonicus HOM05D004233 ORTHO05D003507 1.2e-35 153.3 121 72.7
Phvul.008G106800 Phaseolus vulgaris HOM05D004233 ORTHO05D003507 1.0e-34 150.2 129 67.4
VMungo1383G3137 Vigna mungo HOM05D004233 ORTHO05D003507 1.7e-34 149.4 128 66.4
Glyma.01G113100 Glycine max HOM05D004233 ORTHO05D003507 1.2e-32 143.3 123 61.8
Glyma.18G197700 Glycine max HOM05D004233 ORTHO05D003507 3.6e-32 141.7 129 65.1
Glyma.07G146500 Glycine max HOM05D004233 ORTHO05D003507 1.0e-31 140.2 128 62.5
Phvul.006G186000 Phaseolus vulgaris HOM05D004233 ORTHO05D003507 1.0e-31 140.2 122 67.2
Glyma.03G078400 Glycine max HOM05D004233 ORTHO05D003507 3.0e-31 138.7 120 61.7
VMungo0331G0885 Vigna mungo HOM05D004233 ORTHO05D003507 1.3e-29 133.3 125 56.8
Phvul.010G005000 Phaseolus vulgaris HOM05D004233 ORTHO05D003507 1.4e-28 129.8 126 56.3
Lalb_Chr15g0089821 Lupinus albus HOM05D004233 ORTHO05D003507 7.8e-27 124.0 123 59.3
Lalb_Chr03g0043081 Lupinus albus HOM05D004233 ORTHO05D003507 3.0e-26 122.1 118 62.7
TPR.G1552 Trifolium pratense HOM05D004233 ORTHO05D003507 8.6e-26 120.6 122 59.8
Medtr7g067365 Medicago truncatula HOM05D004233 ORTHO05D003507 9.5e-25 117.1 120 59.2
Hma1.2p1_0763F.1_g214800 Hydrangea macrophylla HOM05D004233 ORTHO05D003507 1.2e-24 116.7 114 56.1
arahy.Tifrunner.gnm1.ann1.BL7XQ3 Arachis hypogaea HOM05D004233 ORTHO05D003507 2.8e-24 115.5 119 58.8
Psat3g130680 Pisum sativum HOM05D004233 ORTHO05D003507 3.6e-24 115.2 119 58.8
Cfa017246 Carpinus fangiana HOM05D004233 ORTHO05D003507 4.0e-23 111.7 116 57.8
Lalb_Chr13g0291241 Lupinus albus HOM05D004233 ORTHO05D003507 2.0e-22 109.4 95 64.2
CiPaw.09G207200 Carya illinoinensis HOM05D004233 ORTHO05D003507 2.6e-22 109.0 112 58.9
QL07p036016 Quercus lobata HOM05D004233 ORTHO05D003507 3.4e-22 108.6 115 57.4
Manes.09G103100 Manihot esculenta HOM05D004233 ORTHO05D003507 4.4e-22 108.2 112 54.5
Ciclev10013109m.g Citrus clementina HOM05D004233 ORTHO05D003507 5.8e-22 107.8 113 54.0
Duzib128G0556 Durio zibethinus HOM05D004233 ORTHO05D003507 2.2e-21 105.9 115 56.5
Duzib093G0978 Durio zibethinus HOM05D004233 ORTHO05D003507 2.9e-21 105.5 115 55.7
Potri.006G097700 Populus trichocarpa HOM05D004233 ORTHO05D003507 2.9e-21 105.5 114 56.1
Duzib106G0630 Durio zibethinus HOM05D004233 ORTHO05D003507 3.7e-21 105.1 117 52.1
Potri.016G112700 Populus trichocarpa HOM05D004233 ORTHO05D003507 1.9e-20 102.8 114 53.5
Rhsim04G0131700 Rhododendron simsii HOM05D004233 ORTHO05D003507 4.1e-20 101.7 113 54.0
Sabra16G0108400 Salix brachista HOM05D004233 ORTHO05D003507 1.2e-19 100.1 114 52.6
Thecc.05G020400 Theobroma cacao HOM05D004233 ORTHO05D003507 2.0e-19 99.4 119 53.8
TWI77G0758 Tripterygium wilfordii HOM05D004233 ORTHO05D003507 2.7e-19 99.0 112 50.9
Sabra06G0075200 Salix brachista HOM05D004233 ORTHO05D003507 4.6e-19 98.2 114 54.4
Dinv37074 Davidia involucrata HOM05D004233 ORTHO05D003507 6.0e-19 97.8 107 56.1
COL.COLO4_14571 Corchorus olitorius HOM05D004233 ORTHO05D003507 7.8e-19 97.4 120 50.0
Eucgr.K02995 Eucalyptus grandis HOM05D004233 ORTHO05D003507 7.8e-19 97.4 121 49.6
Gohir.A09G163800 Gossypium hirsutum HOM05D004233 ORTHO05D003507 3.9e-18 95.1 117 50.4
Gohir.D09G159300 Gossypium hirsutum HOM05D004233 ORTHO05D003507 3.9e-18 95.1 117 50.4
Gorai.006G181000 Gossypium raimondii HOM05D004233 ORTHO05D003507 3.9e-18 95.1 117 50.4
TAR623G0525 Trochodendron aralioides HOM05D004233 ORTHO05D003507 2.5e-17 92.4 114 50.0
ClCG10G021920 Citrullus lanatus HOM05D004233 ORTHO05D003507 4.7e-16 88.2 114 50.0
Prupe.6G271900 Prunus persica HOM05D004233 ORTHO05D003507 6.2e-16 87.8 119 45.4
MELO3C009185.2 Cucumis melo HOM05D004233 ORTHO05D003507 8.1e-16 87.4 114 50.0
MD12G1161500 Malus domestica HOM05D004233 ORTHO05D003507 1.4e-15 86.7 119 43.7
Sed0021305 Sechium edule HOM05D004233 ORTHO05D003507 1.4e-15 86.7 113 51.3
Oeu030524.1 Olea europaea HOM05D004233 ORTHO05D003507 3.1e-15 85.5 112 45.5
RcHm_v2.0_Chr3g0463681 Rosa chinensis HOM05D004233 ORTHO05D003507 4.0e-15 85.1 122 47.5
Nn2g13635 Nelumbo nucifera HOM05D004233 ORTHO05D003507 8.9e-15 84.0 115 41.7
TAR369G1066 Trochodendron aralioides HOM05D004233 ORTHO05D003507 8.9e-15 84.0 117 44.4
FAN09G0897 Fragaria x ananassa HOM05D004233 ORTHO05D003507 1.5e-14 83.2 126 45.2
Oeu024626.1 Olea europaea HOM05D004233 ORTHO05D003507 1.5e-14 83.2 115 44.3
PGR004G1616 Punica granatum HOM05D004233 ORTHO05D003507 1.5e-14 83.2 122 49.2
FvH4_6g11920 Fragaria vesca HOM05D004233 ORTHO05D003507 4.4e-14 81.6 126 44.4
FAN02G0664 Fragaria x ananassa HOM05D004233 ORTHO05D003507 4.4e-14 81.6 126 44.4
FAN05G3657 Fragaria x ananassa HOM05D004233 ORTHO05D003507 4.4e-14 81.6 126 44.4
FAN14G3430 Fragaria x ananassa HOM05D004233 ORTHO05D003507 4.4e-14 81.6 126 44.4
FAN14G4547 Fragaria x ananassa HOM05D004233 ORTHO05D003507 4.4e-14 81.6 126 44.4
Oeu055173.1 Olea europaea HOM05D004233 ORTHO05D003507 4.4e-14 81.6 109 45.9
Cpa.g.sc163.4 Carica papaya HOM05D004233 ORTHO05D003507 2.9e-13 79.0 114 46.5
Sed0017480 Sechium edule HOM05D004233 ORTHO05D003507 2.9e-13 79.0 114 46.5
ClCG04G007170 Citrullus lanatus HOM05D004233 ORTHO05D003507 3.7e-13 78.6 120 46.7
CsaV3_3G034080 Cucumis sativus L. HOM05D004233 ORTHO05D003507 1.9e-12 76.3 114 45.6
Lsat_1_v5_gn_9_35941 Lactuca sativa HOM05D004233 ORTHO05D003507 2.4e-12 75.9 115 45.2
Atru.chr8.2208 Acer truncatum HOM05D004233 ORTHO05D003507 5.4e-12 74.7 86 51.2
Aqoxy4G02651 Aquilegia oxysepala HOM05D004233 ORTHO05D003507 5.4e-12 74.7 113 42.5
Gohir.D01G215600 Gossypium hirsutum HOM05D004233 ORTHO05D003507 3.5e-11 72.0 79 55.7
Gorai.002G261800 Gossypium raimondii HOM05D004233 ORTHO05D003507 3.5e-11 72.0 79 55.7
MSTRG.10228 Avicennia marina HOM05D004233 ORTHO05D003507 6.0e-11 71.2 115 40.9
MELO3C003231.2 Cucumis melo HOM05D004233 ORTHO05D003507 7.8e-11 70.9 126 39.7
Gohir.A01G225900 Gossypium hirsutum HOM05D004233 ORTHO05D003507 1.0e-10 70.5 79 54.4
CsaV3_4G026060 Cucumis sativus L. HOM05D004233 ORTHO05D003507 1.3e-10 70.1 127 39.4
Gohir.A04G088850 Gossypium hirsutum HOM05D004233 ORTHO05D003507 2.3e-10 69.3 86 51.2
MBI06_g42853_MAGBIO Magnolia biondii HOM05D004233 ORTHO05D003507 6.6e-10 67.8 116 38.8
Gohir.D04G129214 Gossypium hirsutum HOM05D004233 ORTHO05D003507 8.6e-10 67.4 86 51.2
Gorai.012G112300 Gossypium raimondii HOM05D004233 ORTHO05D003507 8.6e-10 67.4 86 51.2
Nn1g02891 Nelumbo nucifera HOM05D004233 ORTHO05D003507 5.6e-09 64.7 104 40.4
DCAR_018722 Daucus carota HOM05D004233 ORTHO05D003507 7.3e-09 64.3 120 43.3
Hma1.2p1_0227F.1_g096330 Hydrangea macrophylla HOM05D004233 ORTHO05D003507 1.2e-08 63.5 116 41.4
Rhsim13G0071800 Rhododendron simsii HOM05D004233 ORTHO05D003507 1.6e-08 63.2 114 37.7
THA.LOC104823286 Tarenaya hassleriana HOM05D004233 ORTHO05D003507 2.8e-08 62.4 131 41.2
TPR.G24023 Trifolium pratense HOM05D010371 ORTHO05D003507 1.4e-07 60.1 107 37.4
BcaNung07269 Brassica carinata HOM05D004233 ORTHO05D003507 2.3e-07 59.3 133 35.3
CARHR083380 Cardamine hirsuta HOM05D004233 ORTHO05D003507 8.9e-07 57.4 131 34.4
Peaxi162Scf00056g00201 Petunia axillaris HOM05D004233 ORTHO05D003507 8.9e-07 57.4 67 53.7
DCAR_015449 Daucus carota HOM05D004233 ORTHO05D003507 1.2e-06 57.0 125 39.2
CANSAT35G0502 Cannabis sativa HOM05D004233 ORTHO05D003507 1.5e-06 56.6 70 51.4
PSO339G4028 Papaver somniferum HOM05D004233 ORTHO05D003507 1.5e-06 56.6 138 35.5
A10p33670 Brassica napus HOM05D004233 ORTHO05D003507 2.0e-06 56.2 136 33.1
BraA10t45398Z Brassica rapa HOM05D004233 ORTHO05D003507 2.6e-06 55.8 138 32.6
Sed0015935 Sechium edule HOM05D004233 ORTHO05D003507 3.4e-06 55.5 128 36.7
THA.LOC104827043 Tarenaya hassleriana HOM05D004233 ORTHO05D003507 3.4e-06 55.5 126 39.7
Actinidia25149 Actinidia chinensis HOM05D004233 ORTHO05D003507 4.4e-06 55.1 114 34.2
PGSC0003DMG400004152 Solanum tuberosum HOM05D004233 ORTHO05D003507 7.6e-06 54.3 70 44.3


User provided reference genes

Program Settings