Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_00253_v3 Cicer arietinum L. HOM05D007621 ORTHO05D009631 9.1e-287 989.6 506 100.0
Psat1g208720 Pisum sativum HOM05D007621 ORTHO05D009631 5.8e-217 757.7 504 77.2
TPR.G36840 Trifolium pratense HOM05D007621 ORTHO05D009631 6.4e-208 727.6 496 75.0
Lj6g0025549 Lotus japonicus HOM05D007621 ORTHO05D009631 2.7e-198 695.7 503 68.0
Glyma.15G067500 Glycine max HOM05D007621 ORTHO05D009631 2.5e-196 689.1 508 68.5
VMungo0540G1980 Vigna mungo HOM05D007621 ORTHO05D009631 9.6e-188 660.6 493 66.5
arahy.Tifrunner.gnm1.ann1.M1GH8V Arachis hypogaea HOM05D007621 ORTHO05D009631 3.7e-179 632.1 499 64.5
Haze_06574 Corylus avellana HOM05D007621 ORTHO05D009631 9.0e-178 627.5 504 63.7
CSS0049226 Camellia sinensis var. sinensis HOM05D007621 ORTHO05D009631 1.2e-174 617.1 523 61.2
QL04p018250 Quercus lobata HOM05D007621 ORTHO05D009631 1.6e-174 616.7 457 66.7
Rhsim02G0119600 Rhododendron simsii HOM05D007621 ORTHO05D009631 1.5e-172 610.1 510 62.5
Dinv40478 Davidia involucrata HOM05D007621 ORTHO05D009631 2.0e-172 609.8 512 60.7
GSVIVG01003190001 Vitis vinifera HOM05D007621 ORTHO05D009631 2.4e-170 602.8 497 62.6
Actinidia11809 Actinidia chinensis HOM05D007621 ORTHO05D009631 3.4e-169 599.0 509 60.9
arahy.Tifrunner.gnm1.ann1.14L1JV Arachis hypogaea HOM05D007621 ORTHO05D009631 5.9e-169 598.2 499 61.5
Phvul.006G192200 Phaseolus vulgaris HOM05D007621 ORTHO05D009631 1.9e-167 593.2 500 62.4
ClCG03G005520 Citrullus lanatus HOM05D007621 ORTHO05D009631 4.2e-167 592.0 456 63.8
TAR624G0533 Trochodendron aralioides HOM05D007621 ORTHO05D009631 5.5e-167 591.7 486 60.9
MBI02_g06002_MAGBIO Magnolia biondii HOM05D007621 ORTHO05D009631 1.4e-165 587.0 507 58.4
Prupe.4G036900 Prunus persica HOM05D007621 ORTHO05D009631 3.0e-165 585.9 509 59.3
TWI38G0795 Tripterygium wilfordii HOM05D007621 ORTHO05D009631 7.4e-164 581.3 516 57.9
Cfa000351 Carpinus fangiana HOM05D007621 ORTHO05D009631 2.2e-163 579.7 501 60.3
RcHm_v2.0_Chr5g0006311 Rosa chinensis HOM05D007621 ORTHO05D009631 2.2e-163 579.7 516 58.3
Manes.16G020600 Manihot esculenta HOM05D007621 ORTHO05D009631 2.8e-163 579.3 505 59.4
ATR0693G363 Amborella trichopoda HOM05D007621 ORTHO05D009631 4.8e-163 578.6 468 61.5
FvH4_3g03980 Fragaria vesca HOM05D007621 ORTHO05D009631 6.3e-163 578.2 507 59.2
CsaV3_1G011790 Cucumis sativus L. HOM05D007621 ORTHO05D009631 8.2e-163 577.8 453 64.2
Sed0011037 Sechium edule HOM05D007621 ORTHO05D009631 1.8e-162 576.6 469 61.2
MELO3C002556.2 Cucumis melo HOM05D007621 ORTHO05D009631 7.0e-162 574.7 419 67.5
Nn1g03894 Nelumbo nucifera HOM05D007621 ORTHO05D009631 7.0e-162 574.7 459 61.4
SalBow7G3398 Salvia bowleyana HOM05D007621 ORTHO05D009631 2.6e-161 572.8 487 58.1
FAN11G2677 Fragaria x ananassa HOM05D007621 ORTHO05D009631 3.5e-161 572.4 467 61.5
Ciclev10014484m.g Citrus clementina HOM05D007621 ORTHO05D009631 5.9e-161 571.6 501 59.1
SalBow7G0238 Salvia bowleyana HOM05D007621 ORTHO05D009631 1.3e-160 570.5 487 57.9
MSTRG.14678 Avicennia marina HOM05D007621 ORTHO05D009631 1.1e-159 567.4 467 59.5
Cc02_g12430 Coffea canephora HOM05D007621 ORTHO05D009631 9.4e-159 564.3 504 57.5
PGR042G2283 Punica granatum HOM05D007621 ORTHO05D009631 1.2e-158 563.9 449 61.2
MD05G1325500 Malus domestica HOM05D007621 ORTHO05D009631 6.3e-155 551.6 499 57.7
Hma1.2p1_1182F.1_g264810 Hydrangea macrophylla HOM05D007621 ORTHO05D009631 8.2e-155 551.2 489 58.5
Nitab4.5_0006573g0020 Nicotiana tabacum HOM05D007621 ORTHO05D009631 5.3e-154 548.5 459 60.8
CDE12G0841 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 1.6e-153 547.0 469 58.2
Nitab4.5_0000190g0070 Nicotiana tabacum HOM05D007621 ORTHO05D009631 3.5e-153 545.8 452 60.6
Sopen02g023940 Solanum pennellii HOM05D007621 ORTHO05D009631 4.5e-153 545.4 487 57.7
SGA_v2.0_scaffold49G18280 Striga asiatica HOM05D007621 ORTHO05D009631 5.9e-153 545.0 493 57.2
CAN.G424.15 Capsicum annuum HOM05D007621 ORTHO05D009631 7.7e-153 544.7 499 56.7
ECA248G3190 Erigeron canadensis HOM05D007621 ORTHO05D009631 1.0e-152 544.3 407 62.9
Solyc02g079140.2 Solanum lycopersicum HOM05D007621 ORTHO05D009631 1.3e-152 543.9 487 57.5
Sc14g0001480 Simmondsia chinensis HOM05D007621 ORTHO05D009631 3.8e-152 542.3 440 60.7
HPP92_005890 Vanilla planifolia HOM05D007621 ORTHO05D009631 4.2e-151 538.9 456 59.2
Peaxi162Scf00083g00022 Petunia axillaris HOM05D007621 ORTHO05D009631 7.2e-151 538.1 463 58.3
PGSC0003DMG400022357 Solanum tuberosum HOM05D007621 ORTHO05D009631 9.4e-151 537.7 521 53.9
Eucgr.E03798 Eucalyptus grandis HOM05D007621 ORTHO05D009631 2.7e-150 536.2 459 58.0
HanXRQChr11g0338441 Helianthus annuus HOM05D007621 ORTHO05D009631 4.0e-149 532.3 445 60.4
Zm00001eb069260 Zea mays HOM05D007621 ORTHO05D009631 6.8e-149 531.6 487 56.1
AUR62016897 Chenopodium quinoa HOM05D007621 ORTHO05D009631 1.2e-148 530.8 438 60.0
Lj1C1213T4 Lonicera japonica HOM05D007621 ORTHO05D009631 1.5e-148 530.4 477 57.9
SEGI_29793 Sequoiadendron giganteum HOM05D007621 ORTHO05D009631 1.5e-148 530.4 484 55.8
Os04g0636000 Oryza sativa ssp. japonica HOM05D007621 ORTHO05D009631 4.4e-148 528.9 496 56.9
FAN16G2797 Fragaria x ananassa HOM05D007621 ORTHO05D009631 6.3e-147 525.0 506 55.7
AUR62014718 Chenopodium quinoa HOM05D007621 ORTHO05D009631 2.4e-146 523.1 491 55.6
CDE01G0329 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 5.9e-145 518.5 499 54.5
EL10Ac8g20530 Beta vulgaris HOM05D007621 ORTHO05D009631 2.2e-144 516.5 444 58.1
Lsat_1_v5_gn_1_126820 Lactuca sativa HOM05D007621 ORTHO05D009631 2.9e-144 516.2 477 55.3
Mapoly0104s0019 Marchantia polymorpha HOM05D007621 ORTHO05D009631 1.2e-142 510.8 444 57.7
CDE01G0148 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 1.1e-135 487.6 412 57.8
Hund23606 Selenicereus undatus HOM05D007621 ORTHO05D009631 4.0e-133 479.2 352 66.8
PGR042G3240 Punica granatum HOM05D007621 ORTHO05D009631 5.4e-130 468.8 491 51.3
Zm00001eb081180 Zea mays HOM05D007621 ORTHO05D009631 4.6e-121 439.1 412 54.1
Thecc.06G199600 Theobroma cacao HOM05D007621 ORTHO05D009631 8.1e-110 401.7 455 48.6
Medtr2g011780 Medicago truncatula HOM05D007621 ORTHO05D009631 2.3e-109 400.2 309 68.0
CBR_g725 Chara braunii HOM05D007621 ORTHO05D009631 4.9e-107 392.5 431 46.4
Aqoxy1G02733 Aquilegia oxysepala HOM05D007621 ORTHO05D009631 6.0e-105 385.6 290 66.6
Eucgr.E03700 Eucalyptus grandis HOM05D007621 ORTHO05D009631 5.4e-98 362.5 316 57.9
Zm00001eb274720 Zea mays HOM05D007621 ORTHO05D009631 5.8e-92 342.4 254 64.6
CiPaw.09G157900 Carya illinoinensis HOM05D007621 ORTHO05D009631 2.0e-84 317.4 255 65.1
RcHm_v2.0_Chr7g0240451 Rosa chinensis HOM05D007621 ORTHO05D009631 4.0e-77 293.1 391 43.5
FAN25G1179 Fragaria x ananassa HOM05D007621 ORTHO05D009631 5.8e-76 289.3 248 62.1
Oeu050825.1 Olea europaea HOM05D007621 ORTHO05D009631 2.7e-73 280.4 254 59.1
Psat1g210360 Pisum sativum HOM05D007621 ORTHO05D009631 1.2e-65 255.0 188 69.1
arahy.Tifrunner.gnm1.ann1.C857YU Arachis hypogaea HOM05D007621 ORTHO05D009631 3.1e-61 240.4 281 47.3
Glyma.13G246302 Glycine max HOM05D007621 ORTHO05D009631 4.1e-45 186.8 153 64.7
FvH4_6g02023 Fragaria vesca HOM05D007621 ORTHO05D009631 2.7e-41 174.1 134 59.0
Cre02.g116800 Chlamydomonas reinhardtii HOM05D007621 ORTHO05D009631 1.6e-28 131.7 503 27.2
Potri.004G034301 Populus trichocarpa HOM05D007621 ORTHO05D009631 1.9e-26 124.8 78 67.9
Atru.chr10.2012 Acer truncatum HOM05D007621 ORTHO05D009631 5.7e-23 113.2 134 47.0
Cpa.g.sc27.127 Carica papaya HOM05D007621 ORTHO05D009631 3.7e-22 110.5 136 50.7
SGA_v2.0_scaffold32G13107 Striga asiatica HOM05D007621 ORTHO05D009631 5.9e-20 103.2 126 46.8
AagrBONN_evm.TU.Sc2ySwM_340.408 Anthoceros agrestis HOM05D007621 ORTHO05D009631 4.1e-13 80.5 80 51.2
Sabra04G0020100 Salix brachista HOM05D007621 ORTHO05D009631 7.8e-12 76.3 165 32.1
SGA_v2.0_scaffold86G26914 Striga asiatica HOM05D007621 ORTHO05D009631 6.6e-11 73.2 57 59.6
Atru.chr10.2011 Acer truncatum HOM05D007621 ORTHO05D009631 1.9e-10 71.6 67 49.3
MCO11G679 Micromonas commoda HOM05D000032 ORTHO05D028824 1.8e-08 65.1 175 33.7
EL10Ac8g20531 Beta vulgaris HOM05D007621 ORTHO05D009631 3.4e-07 60.8 71 46.5


User provided reference genes

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