Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_00252_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 3.5e-147 525.0 278 100.0
TPR.G36802 Trifolium pratense HOM05D006486 ORTHO05D007888 3.9e-98 362.1 268 74.6
Medtr2g011760 Medicago truncatula HOM05D006486 ORTHO05D007888 6.4e-93 344.7 254 74.0
Glyma.15G067400 Glycine max HOM05D006486 ORTHO05D007888 3.7e-88 328.9 265 66.4
Glyma.13G246500 Glycine max HOM05D006486 ORTHO05D007888 1.3e-85 320.5 265 64.5
VMungo0540G0810 Vigna mungo HOM05D006486 ORTHO05D007888 1.0e-77 294.3 261 62.5
Phvul.006G192300 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 7.1e-76 288.1 267 60.7
Psat1g208760 Pisum sativum HOM05D006486 ORTHO05D007888 7.9e-75 284.6 250 65.6
Lj6g0020154 Lotus japonicus HOM05D006486 ORTHO05D007888 7.2e-68 261.5 273 57.5
Lj4g0025313 Lotus japonicus HOM05D006486 ORTHO05D007888 4.6e-67 258.8 287 54.7
arahy.Tifrunner.gnm1.ann1.3M60GY Arachis hypogaea HOM05D006486 ORTHO05D007888 1.8e-66 256.9 261 58.6
Lalb_Chr20g0122301 Lupinus albus HOM05D006486 ORTHO05D007888 5.1e-66 255.4 260 58.5
arahy.Tifrunner.gnm1.ann1.4FF3SU Arachis hypogaea HOM05D006486 ORTHO05D007888 4.8e-64 248.8 261 57.5
Glyma.08G059200 Glycine max HOM05D006486 ORTHO05D007888 2.2e-61 240.0 297 51.2
Medtr4g091220 Medicago truncatula HOM05D006486 ORTHO05D007888 5.3e-55 218.8 274 51.1
TPR.G25690 Trifolium pratense HOM05D006486 ORTHO05D007888 5.9e-54 215.3 265 54.7
Prupe.4G037000 Prunus persica HOM05D006486 ORTHO05D007888 3.7e-48 196.1 302 43.7
RcHm_v2.0_Chr5g0006301 Rosa chinensis HOM05D006486 ORTHO05D007888 3.1e-47 193.0 266 46.2
TAR624G1400 Trochodendron aralioides HOM05D006486 ORTHO05D007888 5.3e-47 192.2 272 45.2
FAN16G2112 Fragaria x ananassa HOM05D006486 ORTHO05D007888 9.1e-47 191.4 265 47.2
Cfa000350 Carpinus fangiana HOM05D006486 ORTHO05D007888 3.8e-45 186.0 273 48.0
FAN21G2539 Fragaria x ananassa HOM05D006486 ORTHO05D007888 1.1e-44 184.5 266 45.1
FAN25G3184 Fragaria x ananassa HOM05D006486 ORTHO05D007888 5.5e-44 182.2 265 44.9
MD10G1303500 Malus domestica HOM05D006486 ORTHO05D007888 1.6e-43 180.6 273 44.7
Haze_06576 Corylus avellana HOM05D006486 ORTHO05D007888 2.7e-43 179.9 272 46.7
Nn1g06762 Nelumbo nucifera HOM05D006486 ORTHO05D007888 4.7e-43 179.1 248 47.2
Haze_06575 Corylus avellana HOM05D006486 ORTHO05D007888 6.1e-43 178.7 272 46.3
GSVIVG01003184001 Vitis vinifera HOM05D006486 ORTHO05D007888 1.0e-42 177.9 249 46.6
Psat7g109320 Pisum sativum HOM05D006486 ORTHO05D007888 1.4e-42 177.6 242 47.9
VMungo0251G3177 Vigna mungo HOM05D006486 ORTHO05D007888 2.3e-42 176.8 291 42.6
TAR629G2100 Trochodendron aralioides HOM05D006486 ORTHO05D007888 3.0e-42 176.4 256 44.5
CiPaw.09G157800 Carya illinoinensis HOM05D006486 ORTHO05D007888 6.8e-42 175.3 269 45.4
MD05G1325600 Malus domestica HOM05D006486 ORTHO05D007888 6.8e-42 175.3 270 44.8
Phvul.002G221700 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 3.4e-41 172.9 290 43.1
FvH4_3g03970 Fragaria vesca HOM05D006486 ORTHO05D007888 7.5e-41 171.8 264 46.6
FAN11G1020 Fragaria x ananassa HOM05D006486 ORTHO05D007888 7.5e-41 171.8 264 46.6
TWI63G1620 Tripterygium wilfordii HOM05D006486 ORTHO05D007888 3.7e-40 169.5 272 43.0
Nn1g03891 Nelumbo nucifera HOM05D006486 ORTHO05D007888 1.2e-38 164.5 241 46.5
Manes.16G020500 Manihot esculenta HOM05D006486 ORTHO05D007888 3.5e-38 162.9 284 40.5
QL04p018235 Quercus lobata HOM05D006486 ORTHO05D007888 3.5e-38 162.9 269 43.1
Cc02_g12410 Coffea canephora HOM05D006486 ORTHO05D007888 1.0e-37 161.4 243 43.2
CSS0009661 Camellia sinensis var. sinensis HOM05D006486 ORTHO05D007888 1.3e-37 161.0 249 44.2
Cpa.g.sc27.128 Carica papaya HOM05D006486 ORTHO05D007888 6.5e-37 158.7 254 41.3
Duzib235G1194 Durio zibethinus HOM05D006486 ORTHO05D007888 5.5e-36 155.6 247 47.0
CANSAT56G1095 Cannabis sativa HOM05D006486 ORTHO05D007888 7.2e-36 155.2 275 40.4
Manes.17G039100 Manihot esculenta HOM05D006486 ORTHO05D007888 9.4e-36 154.8 238 44.1
COL.COLO4_31586 Corchorus olitorius HOM05D006486 ORTHO05D007888 1.6e-35 154.1 242 46.3
Thecc.06G199700 Theobroma cacao HOM05D006486 ORTHO05D007888 2.1e-35 153.7 247 45.3
Atru.chr10.2014 Acer truncatum HOM05D006486 ORTHO05D007888 1.8e-34 150.6 294 39.1
Aqoxy1G03879 Aquilegia oxysepala HOM05D006486 ORTHO05D007888 5.2e-34 149.1 266 42.5
Ca_18481_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 1.2e-33 147.9 268 40.7
Rhsim02G0119500 Rhododendron simsii HOM05D006486 ORTHO05D007888 1.2e-33 147.9 263 40.7
Actinidia24058 Actinidia chinensis HOM05D006486 ORTHO05D007888 2.6e-33 146.7 211 46.0
Gohir.A10G021000 Gossypium hirsutum HOM05D006486 ORTHO05D007888 1.4e-31 141.0 243 40.7
Gohir.D10G021800 Gossypium hirsutum HOM05D006486 ORTHO05D007888 1.8e-31 140.6 243 40.7
Gorai.011G022900 Gossypium raimondii HOM05D006486 ORTHO05D007888 2.4e-31 140.2 243 40.7
Potri.011G042600 Populus trichocarpa HOM05D006486 ORTHO05D007888 5.4e-31 139.0 276 38.0
Oeu014709.1 Olea europaea HOM05D006486 ORTHO05D007888 1.2e-30 137.9 245 37.1
MSTRG.7289 Avicennia marina HOM05D006486 ORTHO05D007888 2.0e-30 137.1 251 39.8
THA.LOC104812719 Tarenaya hassleriana HOM05D006486 ORTHO05D007888 3.5e-30 136.3 238 39.5
Lj1P1213T18 Lonicera japonica HOM05D006486 ORTHO05D007888 1.3e-29 134.4 146 48.6
Sabra11G0029300 Salix brachista HOM05D006486 ORTHO05D007888 2.3e-29 133.7 276 36.2
Sed0019218 Sechium edule HOM05D006486 ORTHO05D007888 2.9e-29 133.3 245 43.3
Potri.004G034200 Populus trichocarpa HOM05D006486 ORTHO05D007888 8.6e-29 131.7 254 39.0
Ciclev10016271m.g Citrus clementina HOM05D006486 ORTHO05D007888 1.1e-28 131.3 253 40.7
Aa31LG6G3500 Aethionema arabicum HOM05D006486 ORTHO05D007888 2.5e-28 130.2 260 36.9
PGSC0003DMG400022406 Solanum tuberosum HOM05D006486 ORTHO05D007888 4.2e-28 129.4 257 38.9
MSTRG.15936 Avicennia marina HOM05D006486 ORTHO05D007888 5.5e-28 129.0 249 38.2
Solyc02g079160.2 Solanum lycopersicum HOM05D006486 ORTHO05D007888 7.2e-28 128.6 260 40.4
Sabra04G0019900 Salix brachista HOM05D006486 ORTHO05D007888 3.6e-27 126.3 243 39.1
HanXRQChr08g0224091 Helianthus annuus HOM05D006486 ORTHO05D007888 3.0e-26 123.2 315 33.0
Actinidia11810 Actinidia chinensis HOM05D006486 ORTHO05D007888 4.0e-26 122.9 204 40.7
ClCG01G022550 Citrullus lanatus HOM05D006486 ORTHO05D007888 2.0e-25 120.6 250 38.0
Sopen02g023960 Solanum pennellii HOM05D006486 ORTHO05D007888 2.0e-25 120.6 258 39.5
Nitab4.5_0000190g0060 Nicotiana tabacum HOM05D006486 ORTHO05D007888 2.6e-25 120.2 266 36.8
Nitab4.5_0002222g0020 Nicotiana tabacum HOM05D006486 ORTHO05D007888 2.6e-25 120.2 247 35.6
SGA_v2.0_scaffold7G03946 Striga asiatica HOM05D006486 ORTHO05D007888 4.4e-25 119.4 256 36.7
Oeu059548.1 Olea europaea HOM05D006486 ORTHO05D007888 1.7e-24 117.5 242 36.4
Peaxi162Scf00083g00023 Petunia axillaris HOM05D006486 ORTHO05D007888 2.8e-24 116.7 239 37.7
SalBow8G4438 Salvia bowleyana HOM05D006486 ORTHO05D007888 6.3e-24 115.5 117 53.8
A01p12810 Brassica napus HOM05D006486 ORTHO05D007888 5.4e-23 112.5 246 37.8
BolC1t01497H Brassica oleracea HOM05D006486 ORTHO05D007888 5.4e-23 112.5 254 37.4
BcaNung02794 Brassica carinata HOM05D006486 ORTHO05D007888 2.0e-22 110.5 253 38.3
C01p15430 Brassica napus HOM05D006486 ORTHO05D007888 2.7e-22 110.2 255 38.0
Nitab4.5_0006573g0010 Nicotiana tabacum HOM05D006486 ORTHO05D007888 3.5e-22 109.8 271 34.3
Migut.M01215 Erythranthe guttata HOM05D006486 ORTHO05D007888 4.5e-22 109.4 240 38.3
CsaV3_6G049740 Cucumis sativus L. HOM05D006486 ORTHO05D007888 1.0e-21 108.2 257 34.6
HanXRQChr16g0517421 Helianthus annuus HOM05D006486 ORTHO05D007888 1.7e-21 107.5 284 33.5
CDE05G2620 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 2.3e-21 107.1 252 36.5
Carub.0007s1992 Capsella rubella HOM05D006486 ORTHO05D007888 1.1e-20 104.8 261 36.0
AT4G21500 Arabidopsis thaliana HOM05D006486 ORTHO05D007888 1.5e-20 104.4 247 34.4
Gohir.D09G070600 Gossypium hirsutum HOM05D006486 ORTHO05D007888 1.5e-20 104.4 242 40.9
Gorai.006G085300 Gossypium raimondii HOM05D006486 ORTHO05D007888 1.5e-20 104.4 242 40.9
Oeu043421.1 Olea europaea HOM05D006486 ORTHO05D007888 1.9e-20 104.0 157 40.8
AL7G32570 Arabidopsis lyrata HOM05D006486 ORTHO05D007888 3.3e-20 103.2 256 34.4
ECA234G0536 Erigeron canadensis HOM05D006486 ORTHO05D007888 3.3e-20 103.2 166 38.0
Sed0006081 Sechium edule HOM05D006486 ORTHO05D007888 9.5e-20 101.7 119 50.4
PGR004G0715 Punica granatum HOM05D006486 ORTHO05D007888 1.6e-19 100.9 256 34.0
BraA01t01225Z Brassica rapa HOM05D006486 ORTHO05D007888 2.8e-19 100.1 243 33.3
Gohir.D06G211933 Gossypium hirsutum HOM05D006486 ORTHO05D007888 8.0e-19 98.6 262 34.7
Sp7g19620 Schrenkiella parvula HOM05D006486 ORTHO05D007888 1.4e-18 97.8 255 36.1
DCAR_004139 Daucus carota HOM05D006486 ORTHO05D007888 4.0e-18 96.3 211 36.5
CARHR228160 Cardamine hirsuta HOM05D006486 ORTHO05D007888 6.8e-18 95.5 266 34.6
Thhalv10026096m.g Eutrema salsugineum HOM05D006486 ORTHO05D007888 8.9e-18 95.1 253 35.2
Gorai.010G254200 Gossypium raimondii HOM05D006486 ORTHO05D007888 8.9e-18 95.1 262 35.1
CDE05G2026 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 1.2e-17 94.7 119 52.1
MBI02_g06002_MAGBIO Magnolia biondii HOM05D007621 ORTHO05D009631 1.2e-17 94.7 145 42.1
PSO832G0007 Papaver somniferum HOM05D006486 ORTHO05D007888 2.6e-17 93.6 261 31.8
MELO3C007322.2 Cucumis melo HOM05D006486 ORTHO05D007888 5.8e-17 92.4 251 33.1
Lsat_1_v5_gn_4_56921 Lactuca sativa HOM05D006486 ORTHO05D007888 1.3e-16 91.3 127 41.7
Oeu030052.1 Olea europaea HOM05D006486 ORTHO05D007888 2.2e-16 90.5 215 34.4
PSO210G7027 Papaver somniferum HOM05D006486 ORTHO05D007888 1.9e-15 87.4 261 31.0
EL10Ac8g20532 Beta vulgaris HOM05D006486 ORTHO05D007888 5.4e-15 85.9 308 29.5
Oeu051330.1 Olea europaea HOM05D006486 ORTHO05D007888 5.6e-12 75.9 81 45.7
Sc24g0000710 Simmondsia chinensis HOM05D006486 ORTHO05D007888 3.1e-10 70.1 133 39.8
ATR0693G170 Amborella trichopoda HOM05D006486 ORTHO05D007888 3.4e-09 66.6 147 38.1
AT4G05018 Arabidopsis thaliana HOM05D006486 ORTHO05D007888 2.4e-07 60.5 190 29.5


User provided reference genes

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