Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_00210_v3 Cicer arietinum L. HOM05D003613 ORTHO05D004055 3.8e-45 184.5 96 100.0
TPR.G32634 Trifolium pratense HOM05D003613 ORTHO05D004055 4.1e-39 164.5 94 90.4
Glyma.15G063700 Glycine max HOM05D003613 ORTHO05D004055 4.5e-38 161.0 96 86.5
Glyma.13G250700 Glycine max HOM05D003613 ORTHO05D004055 5.9e-38 160.6 96 86.5
Medtr2g010880 Medicago truncatula HOM05D003613 ORTHO05D004055 2.3e-37 158.7 96 87.5
VMungo0540G1949 Vigna mungo HOM05D003613 ORTHO05D004055 2.9e-37 158.3 96 85.4
Phvul.006G195900 Phaseolus vulgaris HOM05D003613 ORTHO05D004055 1.1e-36 156.4 96 85.4
Glyma.01G154800 Glycine max HOM05D003613 ORTHO05D004055 7.3e-36 153.7 96 80.2
Psat1g210880 Pisum sativum HOM05D003613 ORTHO05D004055 2.8e-35 151.8 97 88.7
Glyma.15G176700 Glycine max HOM05D003613 ORTHO05D004055 3.6e-35 151.4 96 81.2
Lj6g0025627 Lotus japonicus HOM05D003613 ORTHO05D004055 6.1e-35 150.6 96 82.3
Lalb_Chr20g0122601 Lupinus albus HOM05D003613 ORTHO05D004055 1.6e-30 136.0 96 74.0
Cfa004173 Carpinus fangiana HOM05D003613 ORTHO05D004055 1.0e-29 133.3 96 71.9
CsaV3_7G031790 Cucumis sativus L. HOM05D003613 ORTHO05D004055 8.6e-29 130.2 96 71.9
Atru.chr1.2819 Acer truncatum HOM05D003613 ORTHO05D004055 1.5e-28 129.4 97 72.2
TWI31G1088 Tripterygium wilfordii HOM05D003613 ORTHO05D004055 1.9e-28 129.0 93 69.9
MELO3C029246.2 Cucumis melo HOM05D003613 ORTHO05D004055 2.5e-28 128.6 96 71.9
Potri.003G186400 Populus trichocarpa HOM05D003613 ORTHO05D004055 2.5e-28 128.6 96 66.7
Haze_16413 Corylus avellana HOM05D003613 ORTHO05D004055 3.3e-28 128.3 96 70.8
Haze_16416 Corylus avellana HOM05D003613 ORTHO05D004055 3.3e-28 128.3 96 70.8
MD09G1229400 Malus domestica HOM05D003613 ORTHO05D004055 4.3e-28 127.9 96 71.9
Ciclev10026842m.g Citrus clementina HOM05D003613 ORTHO05D004055 5.6e-28 127.5 96 67.7
Haze_15237 Corylus avellana HOM05D003613 ORTHO05D004055 5.6e-28 127.5 96 69.8
Manes.11G070600 Manihot esculenta HOM05D003613 ORTHO05D004055 5.6e-28 127.5 96 70.8
TWI75G1756 Tripterygium wilfordii HOM05D003613 ORTHO05D004055 5.6e-28 127.5 96 67.7
CiPaw.01G052100 Carya illinoinensis HOM05D003613 ORTHO05D004055 7.3e-28 127.1 96 69.8
Prupe.3G105500 Prunus persica HOM05D003613 ORTHO05D004055 1.2e-27 126.3 96 70.8
Glyma.07G187000 Glycine max HOM05D003613 ORTHO05D004055 1.6e-27 125.9 93 71.0
RcHm_v2.0_Chr2g0131951 Rosa chinensis HOM05D003613 ORTHO05D004055 3.6e-27 124.8 96 66.7
Glyma.08G062200 Glycine max HOM05D003613 ORTHO05D004055 4.7e-27 124.4 93 68.8
ClCG09G003430 Citrullus lanatus HOM05D003613 ORTHO05D004055 1.1e-26 123.2 96 68.8
Sabra03G0136400 Salix brachista HOM05D003613 ORTHO05D004055 1.4e-26 122.9 87 69.0
Sed0021976 Sechium edule HOM05D003613 ORTHO05D004055 5.2e-26 120.9 96 65.6
ClCG10G012830 Citrullus lanatus HOM05D003613 ORTHO05D004055 8.9e-26 120.2 97 67.0
MD17G1228300 Malus domestica HOM05D003613 ORTHO05D004055 8.9e-26 120.2 96 66.7
Potri.001G038750 Populus trichocarpa HOM05D003613 ORTHO05D004055 2.0e-25 119.0 96 61.5
CsaV3_3G032670 Cucumis sativus L. HOM05D003613 ORTHO05D004055 2.6e-25 118.6 97 66.0
Sed0006875 Sechium edule HOM05D003613 ORTHO05D004055 2.6e-25 118.6 96 67.7
arahy.Tifrunner.gnm1.ann1.T22GZM Arachis hypogaea HOM05D003613 ORTHO05D004055 4.4e-25 117.9 84 69.0
Phvul.002G218400 Phaseolus vulgaris HOM05D003613 ORTHO05D004055 4.4e-25 117.9 96 63.5
Sabra03G0136500 Salix brachista HOM05D003613 ORTHO05D004055 4.4e-25 117.9 86 66.3
Potri.001G038200 Populus trichocarpa HOM05D003613 ORTHO05D004055 5.8e-25 117.5 96 60.4
Potri.001G040300 Populus trichocarpa HOM05D003613 ORTHO05D004055 5.8e-25 117.5 96 62.5
MELO3C024884.2 Cucumis melo HOM05D003613 ORTHO05D004055 9.8e-25 116.7 97 64.9
Manes.04G099000 Manihot esculenta HOM05D003613 ORTHO05D004055 1.3e-24 116.3 98 67.3
TAR383G0763 Trochodendron aralioides HOM05D003613 ORTHO05D004055 1.7e-24 115.9 101 61.4
FAN02G4453 Fragaria x ananassa HOM05D003613 ORTHO05D004055 2.2e-24 115.5 95 62.1
QL12p003368 Quercus lobata HOM05D003613 ORTHO05D004055 2.2e-24 115.5 95 68.4
Lalb_Chr09g0327111 Lupinus albus HOM05D003613 ORTHO05D004055 3.7e-24 114.8 86 72.1
Eucgr.F03989 Eucalyptus grandis HOM05D003613 ORTHO05D004055 6.4e-24 114.0 98 66.3
Sed0012530 Sechium edule HOM05D003613 ORTHO05D004055 6.4e-24 114.0 89 66.3
Duzib235G1294 Durio zibethinus HOM05D003613 ORTHO05D004055 8.3e-24 113.6 96 60.4
Lalb_Chr16g0383261 Lupinus albus HOM05D003613 ORTHO05D004055 8.3e-24 113.6 97 67.0
Gohir.A06G141700 Gossypium hirsutum HOM05D003613 ORTHO05D004055 1.9e-23 112.5 96 60.4
Gohir.D06G146000 Gossypium hirsutum HOM05D003613 ORTHO05D004055 7.1e-23 110.5 96 59.4
Gorai.010G170200 Gossypium raimondii HOM05D003613 ORTHO05D004055 7.1e-23 110.5 96 59.4
COL.COLO4_30901 Corchorus olitorius HOM05D003613 ORTHO05D004055 9.2e-23 110.2 97 60.8
QL10p043081 Quercus lobata HOM05D003613 ORTHO05D004055 1.2e-22 109.8 95 65.3
arahy.Tifrunner.gnm1.ann1.DB50AT Arachis hypogaea HOM05D003613 ORTHO05D004055 1.6e-22 109.4 96 65.6
Cpa.g.sc68.45 Carica papaya HOM05D003613 ORTHO05D004055 1.6e-22 109.4 93 64.5
DCAR_025611 Daucus carota HOM05D003613 ORTHO05D004055 1.6e-22 109.4 101 59.4
arahy.Tifrunner.gnm1.ann1.XPM13Z Arachis hypogaea HOM05D003613 ORTHO05D004055 2.1e-22 109.0 77 67.5
Dinv21437 Davidia involucrata HOM05D003613 ORTHO05D004055 2.1e-22 109.0 102 59.8
GSVIVG01016088001 Vitis vinifera HOM05D003613 ORTHO05D004055 2.1e-22 109.0 101 60.4
Duzib192G0866 Durio zibethinus HOM05D003613 ORTHO05D004055 3.5e-22 108.2 96 59.4
Gohir.A10G049000 Gossypium hirsutum HOM05D003613 ORTHO05D004055 3.5e-22 108.2 96 59.4
Lalb_Chr19g0125611 Lupinus albus HOM05D003613 ORTHO05D004055 3.5e-22 108.2 96 61.5
Thecc.06G133700 Theobroma cacao HOM05D003613 ORTHO05D004055 3.5e-22 108.2 97 60.8
ECA247G1662 Erigeron canadensis HOM05D003613 ORTHO05D004055 4.6e-22 107.8 101 57.4
Gohir.D10G049600 Gossypium hirsutum HOM05D003613 ORTHO05D004055 4.6e-22 107.8 96 59.4
Gorai.011G053100 Gossypium raimondii HOM05D003613 ORTHO05D004055 4.6e-22 107.8 96 59.4
Ca_18450_v3 Cicer arietinum L. HOM05D003613 ORTHO05D004055 6.0e-22 107.5 87 67.8
Duzib160G0323 Durio zibethinus HOM05D003613 ORTHO05D004055 6.0e-22 107.5 96 58.3
Oeu051549.1 Olea europaea HOM05D003613 ORTHO05D004055 7.8e-22 107.1 104 57.7
ECA232G3259 Erigeron canadensis HOM05D003613 ORTHO05D004055 1.3e-21 106.3 100 57.0
HanXRQChr04g0100011 Helianthus annuus HOM05D003613 ORTHO05D004055 2.3e-21 105.5 102 57.8
arahy.Tifrunner.gnm1.ann1.M9YY7V Arachis hypogaea HOM05D003613 ORTHO05D004055 3.0e-21 105.1 96 64.6
Oeu033454.1 Olea europaea HOM05D003613 ORTHO05D004055 1.9e-20 102.4 105 55.2
vmacro19080 Vaccinium macrocarpon HOM05D003613 ORTHO05D004055 1.9e-20 102.4 102 58.8
MSTRG.9389 Avicennia marina HOM05D003613 ORTHO05D004055 3.3e-20 101.7 104 52.9
Migut.D01149 Erythranthe guttata HOM05D003613 ORTHO05D004055 4.3e-20 101.3 106 54.7
FAN14G0884 Fragaria x ananassa HOM05D008004 ORTHO05D004055 7.3e-20 100.5 76 68.4
Rhsim12G0183300 Rhododendron simsii HOM05D003613 ORTHO05D004055 9.5e-20 100.1 102 55.9
TPR.G13916 Trifolium pratense HOM05D003613 ORTHO05D004055 1.2e-19 99.8 75 61.3
MBI14_g16433_MAGBIO Magnolia biondii HOM05D003613 ORTHO05D004055 2.8e-19 98.6 105 55.2
Potri.001G039700 Populus trichocarpa HOM05D003613 ORTHO05D004055 3.6e-19 98.2 74 63.5
SalBow1G4637 Salvia bowleyana HOM05D003613 ORTHO05D004055 4.7e-19 97.8 105 55.2
SGA_v2.0_scaffold74G24606 Striga asiatica HOM05D003613 ORTHO05D004055 4.7e-19 97.8 105 51.4
Cc04_g05380 Coffea canephora HOM05D003613 ORTHO05D004055 6.2e-19 97.4 102 52.9
Rhsim08G0202400 Rhododendron simsii HOM05D003613 ORTHO05D004055 8.1e-19 97.1 102 54.9
Nn8g40130 Nelumbo nucifera HOM05D003613 ORTHO05D004055 1.1e-18 96.7 101 55.4
Lsat_1_v5_gn_5_9061 Lactuca sativa HOM05D003613 ORTHO05D004055 1.4e-18 96.3 102 52.9
THA.LOC104813597 Tarenaya hassleriana HOM05D003613 ORTHO05D004055 1.4e-18 96.3 88 61.4
MSTRG.22838 Avicennia marina HOM05D003613 ORTHO05D004055 1.8e-18 95.9 101 51.5
Aqoxy5G00706 Aquilegia oxysepala HOM05D003613 ORTHO05D004055 3.1e-18 95.1 101 52.5
FvH4_6g28090 Fragaria vesca HOM05D008004 ORTHO05D011218 4.0e-18 94.7 68 69.1
SGA_v2.0_scaffold515G52657 Striga asiatica HOM05D003613 ORTHO05D004055 5.2e-18 94.4 106 50.9
Lj4g0025384 Lotus japonicus HOM05D003613 ORTHO05D004055 6.8e-18 94.0 88 56.8
Lsat_1_v5_gn_4_84900 Lactuca sativa HOM05D003613 ORTHO05D004055 8.9e-18 93.6 100 52.0
Peaxi162Scf00195g00118 Petunia axillaris HOM05D003613 ORTHO05D004055 8.9e-18 93.6 80 62.5
ATR0580G444 Amborella trichopoda HOM05D003613 ORTHO05D004055 1.2e-17 93.2 102 51.0
unitig_8.g3041 Utricularia gibba HOM05D003613 ORTHO05D004055 1.2e-17 93.2 104 51.0
PGSC0003DMG400014438 Solanum tuberosum HOM05D003613 ORTHO05D004055 1.5e-17 92.8 105 54.3
Aa31LG7G710 Aethionema arabicum HOM05D003613 ORTHO05D004055 2.0e-17 92.4 97 56.7
MSTRG.11218 Avicennia marina HOM05D003613 ORTHO05D004055 2.0e-17 92.4 82 61.0
BcaB03g14503 Brassica carinata HOM05D003613 ORTHO05D004055 2.6e-17 92.0 97 55.7
C08p44600 Brassica napus HOM05D003613 ORTHO05D004055 2.6e-17 92.0 97 55.7
BolC8t52006H Brassica oleracea HOM05D003613 ORTHO05D004055 2.6e-17 92.0 97 55.7
SHI11349 Sapria himalayana HOM05D003613 ORTHO05D004055 2.6e-17 92.0 91 56.0
SEGI_37804 Sequoiadendron giganteum HOM05D003613 ORTHO05D004055 2.6e-17 92.0 83 60.2
HanXRQChr05g0157501 Helianthus annuus HOM05D003613 ORTHO05D004055 3.4e-17 91.7 103 51.5
Sopen12g021630 Solanum pennellii HOM05D003613 ORTHO05D004055 3.4e-17 91.7 105 53.3
AT1G16170 Arabidopsis thaliana HOM05D003613 ORTHO05D004055 4.4e-17 91.3 100 57.0
Migut.I00632 Erythranthe guttata HOM05D003613 ORTHO05D004055 4.4e-17 91.3 106 49.1
Nitab4.5_0005437g0020 Nicotiana tabacum HOM05D003613 ORTHO05D004055 4.4e-17 91.3 107 52.3
Solyc12g042540.1 Solanum lycopersicum HOM05D003613 ORTHO05D004055 5.8e-17 90.9 105 52.4
Sp5g34740 Schrenkiella parvula HOM05D003613 ORTHO05D004055 7.6e-17 90.5 97 55.7
AL1G28300 Arabidopsis lyrata HOM05D003613 ORTHO05D004055 9.9e-17 90.1 97 56.7
CSS0042010 Camellia sinensis var. sinensis HOM05D003613 ORTHO05D004055 9.9e-17 90.1 104 51.9
Carub.0002s2654 Capsella rubella HOM05D003613 ORTHO05D004055 9.9e-17 90.1 97 54.6
unitig_22.g6276 Utricularia gibba HOM05D003613 ORTHO05D004055 9.9e-17 90.1 104 48.1
ECA246G2284 Erigeron canadensis HOM05D003613 ORTHO05D004055 2.2e-16 89.0 102 48.0
Thhalv10019378m.g Eutrema salsugineum HOM05D003613 ORTHO05D004055 2.2e-16 89.0 97 53.6
A09p61000 Brassica napus HOM05D003613 ORTHO05D004055 2.9e-16 88.6 97 54.6
BraA09t41473Z Brassica rapa HOM05D003613 ORTHO05D004055 2.9e-16 88.6 97 54.6
TAR626G0045 Trochodendron aralioides HOM05D003147 ORTHO05D004055 3.7e-16 88.2 102 51.0
AL2G40350 Arabidopsis lyrata HOM05D003613 ORTHO05D004055 6.4e-16 87.4 97 53.6
CARHR073400 Cardamine hirsuta HOM05D003613 ORTHO05D004055 6.4e-16 87.4 97 56.7
MBI15_g26076_MAGBIO Magnolia biondii HOM05D003613 ORTHO05D004055 6.4e-16 87.4 105 51.4
EL10Ac5g12047 Beta vulgaris HOM05D003613 ORTHO05D004055 8.3e-16 87.0 99 51.5
BcaC08g47524 Brassica carinata HOM05D003613 ORTHO05D004055 8.3e-16 87.0 98 54.1
Os08g0266200 Oryza sativa ssp. japonica HOM05D003613 ORTHO05D004055 8.3e-16 87.0 101 48.5
Sopen03g036670 Solanum pennellii HOM05D003613 ORTHO05D004055 8.3e-16 87.0 105 48.6
Actinidia36859 Actinidia chinensis HOM05D000338 ORTHO05D003721 1.1e-15 86.7 76 60.5
ATR0068G040 Amborella trichopoda HOM05D003613 ORTHO05D004055 1.1e-15 86.7 102 49.0
CAN.G1008.14 Capsicum annuum HOM05D003613 ORTHO05D004055 1.1e-15 86.7 106 48.1
PGSC0003DMG400014217 Solanum tuberosum HOM05D003613 ORTHO05D004055 1.1e-15 86.7 105 47.6
AT1G79660 Arabidopsis thaliana HOM05D003613 ORTHO05D004055 1.4e-15 86.3 97 52.6
BcaB02g06598 Brassica carinata HOM05D003613 ORTHO05D004055 1.4e-15 86.3 98 54.1
A06p12110 Brassica napus HOM05D003613 ORTHO05D004055 1.4e-15 86.3 98 55.1
BraA06t24380Z Brassica rapa HOM05D003613 ORTHO05D004055 1.4e-15 86.3 98 55.1
Thhalv10009201m.g Eutrema salsugineum HOM05D003613 ORTHO05D004055 2.4e-15 85.5 97 55.7
Sp1g14410 Schrenkiella parvula HOM05D003613 ORTHO05D004055 2.4e-15 85.5 97 55.7
AUR62018676 Chenopodium quinoa HOM05D003613 ORTHO05D004055 3.2e-15 85.1 101 49.5
arahy.Tifrunner.gnm1.ann1.LI0G0T Arachis hypogaea HOM05D003613 ORTHO05D004055 4.1e-15 84.7 73 58.9
CARHR016650 Cardamine hirsuta HOM05D003613 ORTHO05D004055 4.1e-15 84.7 97 55.7
DCAR_021377 Daucus carota HOM05D003613 ORTHO05D004055 5.4e-15 84.3 82 51.2
Nitab4.5_0002700g0020 Nicotiana tabacum HOM05D003613 ORTHO05D004055 9.2e-15 83.6 81 58.0
Ah.12g055300 Amaranthus hybridus HOM05D003613 ORTHO05D004055 1.2e-14 83.2 103 52.4
BolC5t30160H Brassica oleracea HOM05D003613 ORTHO05D004055 1.2e-14 83.2 97 55.7
Nn2g12477 Nelumbo nucifera HOM05D003613 ORTHO05D004055 2.1e-14 82.4 104 51.0
BcaC08g47525 Brassica carinata HOM05D003613 ORTHO05D004055 3.5e-14 81.6 98 52.0
BolC6t40365H Brassica oleracea HOM05D003613 ORTHO05D004055 3.5e-14 81.6 98 52.0
BcaC05g25604 Brassica carinata HOM05D003613 ORTHO05D004055 7.8e-14 80.5 97 54.6
BcaC07g38803 Brassica carinata HOM05D003613 ORTHO05D004055 1.0e-13 80.1 98 53.1
C08p17390 Brassica napus HOM05D003613 ORTHO05D004055 1.0e-13 80.1 98 53.1
BolC8t49365H Brassica oleracea HOM05D003613 ORTHO05D004055 1.0e-13 80.1 98 53.1
Carub.0001s1593 Capsella rubella HOM05D003613 ORTHO05D004055 1.0e-13 80.1 97 52.6
A07p44660 Brassica napus HOM05D003613 ORTHO05D004055 1.3e-13 79.7 98 51.0
BraA07t31975Z Brassica rapa HOM05D003613 ORTHO05D004055 1.3e-13 79.7 98 51.0
Aa31LG4G1310 Aethionema arabicum HOM05D003613 ORTHO05D004055 1.7e-13 79.3 82 57.3
C05p14290 Brassica napus HOM05D003613 ORTHO05D004055 3.0e-13 78.6 97 53.6
BcaB03g13047 Brassica carinata HOM05D003613 ORTHO05D004055 3.9e-13 78.2 98 54.1
Pp3c10_10840 Physcomitrium patens HOM05D003613 ORTHO05D004055 6.6e-13 77.4 88 52.3
Gohir.A09G076160 Gossypium hirsutum HOM05D003613 ORTHO05D004055 8.6e-13 77.0 96 47.9
A08p31400 Brassica napus HOM05D003613 ORTHO05D004055 1.1e-12 76.6 98 52.0
BraA08t35063Z Brassica rapa HOM05D003613 ORTHO05D004055 1.1e-12 76.6 98 52.0
Zm00001eb177920 Zea mays HOM05D003613 ORTHO05D004055 1.9e-12 75.9 98 45.9
Gohir.D09G076100 Gossypium hirsutum HOM05D003613 ORTHO05D004055 7.3e-12 73.9 96 44.8
Gorai.006G091300 Gossypium raimondii HOM05D003613 ORTHO05D004055 1.6e-11 72.8 96 44.8
Zm00001eb412000 Zea mays HOM05D003613 ORTHO05D004055 1.6e-11 72.8 99 47.5
BcaC03g14996 Brassica carinata HOM05D003613 ORTHO05D004055 1.1e-10 70.1 83 53.0
C02p25300 Brassica napus HOM05D003613 ORTHO05D004055 1.1e-10 70.1 83 53.0
BolC2t08604H Brassica oleracea HOM05D003613 ORTHO05D004055 1.1e-10 70.1 83 53.0
Pp3c14_25540 Physcomitrium patens HOM05D003613 ORTHO05D004055 4.0e-10 68.2 75 54.7
BcaC03g17203 Brassica carinata HOM05D003613 ORTHO05D004055 1.5e-09 66.2 77 54.5
BolC2t11219H Brassica oleracea HOM05D003613 ORTHO05D004055 1.5e-09 66.2 77 54.5
AagrBONN_evm.TU.Sc2ySwM_368.2820 Anthoceros agrestis HOM05D003613 ORTHO05D004055 2.6e-09 65.5 51 58.8
BolC8t51544H Brassica oleracea HOM05D003613 ORTHO05D004055 4.4e-09 64.7 76 53.9
CSS0016880 Camellia sinensis var. sinensis HOM05D003613 ORTHO05D004055 5.8e-09 64.3 80 50.0
C08p39730 Brassica napus HOM05D003613 ORTHO05D004055 9.9e-09 63.5 77 51.9
SMO001G0027 Selaginella moellendorffii HOM05D003613 ORTHO05D004055 1.7e-08 62.8 52 59.6
SMO307G0037 Selaginella moellendorffii HOM05D000818 ORTHO05D004055 1.7e-08 62.8 52 59.6
Mapoly0033s0168 Marchantia polymorpha HOM05D000087 ORTHO05D255883 2.2e-08 62.4 78 47.4
DCAR_021376 Daucus carota HOM05D003613 ORTHO05D004055 2.7e-06 55.5 69 46.4
Nitab4.5_0002302g0110 Nicotiana tabacum HOM05D003613 ORTHO05D004055 7.8e-06 53.9 55 58.2


User provided reference genes

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