Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_00195_v3 Cicer arietinum L. HOM05D006483 ORTHO05D007837 2.6e-244 848.2 399 100.0
Glyma.15G061600 Glycine max HOM05D006483 ORTHO05D007837 2.0e-204 715.7 399 84.7
Psat1g212200 Pisum sativum HOM05D006483 ORTHO05D007837 1.3e-203 713.0 396 85.4
Lj1g0015418 Lotus japonicus HOM05D006483 ORTHO05D007837 2.1e-201 705.7 397 85.1
Phvul.006G198100 Phaseolus vulgaris HOM05D006483 ORTHO05D007837 2.3e-200 702.2 399 83.5
Medtr2g010480 Medicago truncatula HOM05D006483 ORTHO05D007837 4.3e-199 698.0 407 82.8
VMungo0540G0518 Vigna mungo HOM05D006483 ORTHO05D007837 3.1e-197 691.8 399 82.5
Lalb_Chr15g0090221 Lupinus albus HOM05D006483 ORTHO05D007837 1.6e-193 679.5 404 79.2
arahy.Tifrunner.gnm1.ann1.SKNB9F Arachis hypogaea HOM05D006483 ORTHO05D007837 6.6e-192 674.1 420 77.6
Ciclev10030436m.g Citrus clementina HOM05D006483 ORTHO05D007837 3.9e-184 648.3 366 80.6
QL11p027690 Quercus lobata HOM05D006483 ORTHO05D007837 5.1e-184 647.9 388 78.6
CiPaw.06G161800 Carya illinoinensis HOM05D006483 ORTHO05D007837 1.5e-183 646.4 397 77.8
Potri.001G287700 Populus trichocarpa HOM05D006483 ORTHO05D007837 7.4e-183 644.0 384 78.9
Cpa.g.sc20.69 Carica papaya HOM05D006483 ORTHO05D007837 1.3e-182 643.3 356 83.7
Atru.chr5.2145 Acer truncatum HOM05D006483 ORTHO05D007837 1.6e-182 642.9 408 76.5
Duzib132G0719 Durio zibethinus HOM05D006483 ORTHO05D007837 2.1e-182 642.5 403 76.9
Sabra16G0180000 Salix brachista HOM05D006483 ORTHO05D007837 2.8e-182 642.1 381 80.1
Lsat_1_v5_gn_5_110541 Lactuca sativa HOM05D006483 ORTHO05D007837 4.0e-181 638.3 389 77.4
PGR142G2962 Punica granatum HOM05D006483 ORTHO05D007837 4.0e-181 638.3 356 82.0
Dinv09500 Davidia involucrata HOM05D006483 ORTHO05D007837 2.6e-180 635.6 330 87.3
Cfa004758 Carpinus fangiana HOM05D006483 ORTHO05D007837 5.8e-180 634.4 396 76.0
Rhsim11G0146300 Rhododendron simsii HOM05D006483 ORTHO05D007837 1.0e-179 633.6 356 81.7
Nn6g34537 Nelumbo nucifera HOM05D006483 ORTHO05D007837 1.3e-179 633.3 356 81.5
vmacro01915 Vaccinium macrocarpon HOM05D006483 ORTHO05D007837 8.4e-179 630.6 369 78.9
Eucgr.I02515 Eucalyptus grandis HOM05D006483 ORTHO05D007837 1.1e-178 630.2 356 81.2
Thecc.02G034600 Theobroma cacao HOM05D006483 ORTHO05D007837 1.4e-178 629.8 389 77.6
GSVIVG01036968001 Vitis vinifera HOM05D006483 ORTHO05D007837 1.9e-178 629.4 354 81.6
Gorai.008G043200 Gossypium raimondii HOM05D006483 ORTHO05D007837 2.5e-178 629.0 394 76.6
Gohir.D12G041300 Gossypium hirsutum HOM05D006483 ORTHO05D007837 5.5e-178 627.9 393 76.8
MD10G1115000 Malus domestica HOM05D006483 ORTHO05D007837 7.1e-178 627.5 388 76.5
CsaV3_4G014600 Cucumis sativus L. HOM05D006483 ORTHO05D007837 1.2e-177 626.7 395 74.7
Gohir.A12G031000 Gossypium hirsutum HOM05D006483 ORTHO05D007837 1.6e-177 626.3 393 75.8
TWI59G1265 Tripterygium wilfordii HOM05D006483 ORTHO05D007837 1.6e-177 626.3 388 76.3
ClCG10G009710 Citrullus lanatus HOM05D006483 ORTHO05D007837 6.0e-177 624.4 398 73.6
HanXRQChr10g0297661 Helianthus annuus HOM05D006483 ORTHO05D007837 1.8e-176 622.9 389 76.1
Manes.07G049300 Manihot esculenta HOM05D006483 ORTHO05D007837 1.8e-176 622.9 377 78.8
Sed0015964 Sechium edule HOM05D006483 ORTHO05D007837 2.3e-176 622.5 397 73.6
Cc02_g20380 Coffea canephora HOM05D006483 ORTHO05D007837 2.5e-175 619.0 360 80.3
Prupe.8G157100 Prunus persica HOM05D006483 ORTHO05D007837 9.6e-175 617.1 389 74.6
TAR376G0523 Trochodendron aralioides HOM05D006483 ORTHO05D007837 9.6e-175 617.1 381 76.1
COL.COLO4_17833 Corchorus olitorius HOM05D006483 ORTHO05D007837 3.7e-174 615.1 351 82.1
CANSAT25G2975 Cannabis sativa HOM05D006483 ORTHO05D007837 4.8e-174 614.8 388 74.2
Duzib248G0339 Durio zibethinus HOM05D006483 ORTHO05D007837 6.2e-174 614.4 327 85.9
CiPaw.05G024900 Carya illinoinensis HOM05D006483 ORTHO05D007837 1.4e-173 613.2 327 85.3
FAN24G1160 Fragaria x ananassa HOM05D006483 ORTHO05D007837 1.8e-173 612.8 392 73.5
RcHm_v2.0_Chr6g0246361 Rosa chinensis HOM05D006483 ORTHO05D007837 1.8e-173 612.8 386 74.4
Sc14g0002760 Simmondsia chinensis HOM05D006483 ORTHO05D007837 3.1e-173 612.1 378 75.4
Aqoxy6G02925 Aquilegia oxysepala HOM05D006483 ORTHO05D007837 9.0e-173 610.5 382 75.7
FAN20G1555 Fragaria x ananassa HOM05D006483 ORTHO05D007837 3.4e-172 608.6 390 72.8
arahy.Tifrunner.gnm1.ann1.AKE21I Arachis hypogaea HOM05D006483 ORTHO05D007837 4.5e-172 608.2 422 70.6
FvH4_2g02550 Fragaria vesca HOM05D006483 ORTHO05D007837 5.8e-172 607.8 392 73.0
PSO541G5548 Papaver somniferum HOM05D006483 ORTHO05D007837 1.3e-171 606.7 325 83.4
EL10Ac9g22152 Beta vulgaris HOM05D006483 ORTHO05D007837 2.2e-171 605.9 331 83.4
FAN15G2441 Fragaria x ananassa HOM05D006483 ORTHO05D007837 3.8e-171 605.1 327 83.5
ECA234G3552 Erigeron canadensis HOM05D006483 ORTHO05D007837 1.1e-170 603.6 317 85.5
Peaxi162Scf00152g00613 Petunia axillaris HOM05D006483 ORTHO05D007837 5.5e-170 601.3 351 78.9
Solyc11g044310.2 Solanum lycopersicum HOM05D006483 ORTHO05D007837 5.5e-170 601.3 375 73.6
Sopen11g019810 Solanum pennellii HOM05D006483 ORTHO05D007837 1.6e-169 599.7 375 73.3
CAN.G475.27 Capsicum annuum HOM05D006483 ORTHO05D007837 2.7e-169 599.0 362 76.2
Aa31LG8G12670 Aethionema arabicum HOM05D006483 ORTHO05D007837 6.1e-169 597.8 365 75.3
Carub.0003s2843 Capsella rubella HOM05D006483 ORTHO05D007837 6.1e-169 597.8 316 84.5
PSO675G7999 Papaver somniferum HOM05D006483 ORTHO05D007837 7.9e-169 597.4 329 81.2
FAN27G0654 Fragaria x ananassa HOM05D006483 ORTHO05D007837 3.0e-168 595.5 415 69.4
Sp3g27660 Schrenkiella parvula HOM05D006483 ORTHO05D007837 7.4e-167 590.9 394 71.1
Lj5C223T22 Lonicera japonica HOM05D006483 ORTHO05D007837 9.7e-167 590.5 359 77.2
CSS0046506 Camellia sinensis var. sinensis HOM05D006483 ORTHO05D007837 1.6e-166 589.7 393 72.8
CARHR105280 Cardamine hirsuta HOM05D006483 ORTHO05D007837 2.8e-166 589.0 315 83.5
THA.LOC104819515 Tarenaya hassleriana HOM05D006483 ORTHO05D007837 2.8e-166 589.0 319 83.7
Thhalv10022723m.g Eutrema salsugineum HOM05D006483 ORTHO05D007837 6.3e-166 587.8 315 82.5
BolC3t17891H Brassica oleracea HOM05D006483 ORTHO05D007837 1.8e-165 586.3 331 79.5
A03p45170 Brassica napus HOM05D006483 ORTHO05D007837 2.4e-165 585.9 323 81.1
BraA03t13652Z Brassica rapa HOM05D006483 ORTHO05D007837 2.4e-165 585.9 323 81.1
BcaC01g03099 Brassica carinata HOM05D006483 ORTHO05D007837 3.1e-165 585.5 331 79.5
DCAR_029840 Daucus carota HOM05D006483 ORTHO05D007837 3.1e-165 585.5 317 83.0
ATR0739G015 Amborella trichopoda HOM05D006483 ORTHO05D007837 6.9e-165 584.3 377 72.4
AL3G45940 Arabidopsis lyrata HOM05D006483 ORTHO05D007837 3.4e-164 582.0 316 82.6
SalBow6G1047 Salvia bowleyana HOM05D006483 ORTHO05D007837 4.5e-164 581.6 383 71.5
BcaB08g34553 Brassica carinata HOM05D006483 ORTHO05D007837 2.2e-163 579.3 317 82.3
Migut.B00501 Erythranthe guttata HOM05D006483 ORTHO05D007837 5.5e-162 574.7 378 71.4
AT2G14260 Arabidopsis thaliana HOM05D006483 ORTHO05D007837 4.6e-161 571.6 316 81.6
C03p56040 Brassica napus HOM05D006483 ORTHO05D007837 7.9e-161 570.9 360 73.1
MELO3C018038.2 Cucumis melo HOM05D006483 ORTHO05D007837 6.7e-160 567.8 429 66.2
SGA_v2.0_scaffold342G49421 Striga asiatica HOM05D006483 ORTHO05D007837 5.7e-159 564.7 350 74.3
CSS0033600 Camellia sinensis var. sinensis HOM05D006483 ORTHO05D007837 2.4e-157 559.3 358 75.1
unitig_21.g20708 Utricularia gibba HOM05D006483 ORTHO05D007837 5.3e-157 558.1 326 75.8
TAR628G0755 Trochodendron aralioides HOM05D006483 ORTHO05D007837 7.9e-153 544.3 290 83.1
CDE02G1970 Ceratophyllum demersum HOM05D006483 ORTHO05D007837 1.8e-152 543.1 372 69.4
MSTRG.16655 Avicennia marina HOM05D006483 ORTHO05D007837 4.4e-151 538.5 287 82.6
HPP92_006303 Vanilla planifolia HOM05D006483 ORTHO05D007837 1.3e-150 537.0 319 75.9
AUR62027055 Chenopodium quinoa HOM05D006483 ORTHO05D007837 1.1e-143 513.8 321 74.8
AagrBONN_evm.TU.Sc2ySwM_344.4362 Anthoceros agrestis HOM05D006483 ORTHO05D007837 1.7e-142 510.0 324 68.5
Zm00001eb292750 Zea mays HOM05D006483 ORTHO05D007837 2.8e-142 509.2 283 79.9
SMO145G0068 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 3.7e-142 508.8 310 73.2
Haze_10356 Corylus avellana HOM05D006483 ORTHO05D007837 1.2e-140 503.8 644 46.1
Pp3c4_27270 Physcomitrium patens HOM05D006483 ORTHO05D007837 2.0e-140 503.1 315 71.1
Mapoly0001s0344 Marchantia polymorpha HOM05D006483 ORTHO05D007837 4.5e-140 501.9 329 69.0
CBR_g8564 Chara braunii HOM05D006483 ORTHO05D007837 3.7e-126 455.7 315 65.1
Os05g0513900 Oryza sativa ssp. japonica HOM05D006483 ORTHO05D007837 1.5e-119 433.7 245 80.0
Ah.01g024350 Amaranthus hybridus HOM05D006483 ORTHO05D007837 2.6e-111 406.4 267 72.3
Nitab4.5_0007517g0010 Nicotiana tabacum HOM05D006483 ORTHO05D007837 7.8e-108 394.8 262 71.4
AUR62030898 Chenopodium quinoa HOM05D006483 ORTHO05D007837 5.4e-101 372.1 284 64.1
Actinidia00335 Actinidia chinensis HOM05D006483 ORTHO05D007837 7.1e-101 371.7 227 77.5
Mapoly0142s0028 Marchantia polymorpha HOM05D006483 ORTHO05D007837 3.2e-93 346.3 350 46.9
AagrBONN_evm.TU.Sc2ySwM_344.1401 Anthoceros agrestis HOM05D006483 ORTHO05D007837 4.3e-82 309.3 350 42.6
SMO364G0301 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 6.2e-81 305.4 313 45.7
SMO353G0285 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 1.1e-80 304.7 314 45.9
MBI16_g27214_MAGBIO Magnolia biondii HOM05D006483 ORTHO05D007837 6.0e-76 288.9 166 80.7
MBI16_g41225_MAGBIO Magnolia biondii HOM05D006483 ORTHO05D007837 1.4e-61 241.1 196 59.2
PRCOL_00002897 Prasinoderma coloniale HOM05D006483 ORTHO05D007837 3.0e-59 233.4 343 40.2
Zm00001eb142680 Zea mays HOM05D006483 ORTHO05D007837 8.2e-57 225.3 182 58.8
SEGI_12853 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 9.0e-56 221.9 122 80.3
EL10Ac8g19599 Beta vulgaris HOM05D006483 ORTHO05D007837 2.5e-50 203.8 153 68.0
MD05G1112500 Malus domestica HOM05D006483 ORTHO05D007837 7.7e-47 192.2 204 51.5
Cre08.g375600 Chlamydomonas reinhardtii HOM05D006483 ORTHO05D007837 2.9e-46 190.3 196 45.9
Oeu007495.1 Olea europaea HOM05D006483 ORTHO05D007837 2.4e-32 144.1 85 72.9
MD05G1112400 Malus domestica HOM05D006483 ORTHO05D007837 1.7e-22 111.3 61 80.3
SEGI_05070 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 8.3e-17 92.4 84 50.0
TPR.G27616 Trifolium pratense HOM05D006483 ORTHO05D007837 2.1e-12 77.8 39 79.5
arahy.Tifrunner.gnm1.ann1.W5BQ9H Arachis hypogaea HOM05D006483 ORTHO05D000252 3.6e-12 77.0 62 61.3
Cfa023956 Carpinus fangiana HOM05D026080 ORTHO05D034125 1.1e-08 65.5 116 32.8
SEGI_04316 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 3.1e-08 63.9 34 73.5
Ciclev10016000m.g Citrus clementina HOM05D000363 ORTHO05D000236 5.9e-07 59.7 132 26.5
FAN19G0844 Fragaria x ananassa HOM05D000363 ORTHO05D000236 1.7e-06 58.2 104 34.6
ClCG01G022790 Citrullus lanatus HOM05D000363 ORTHO05D000236 2.9e-06 57.4 100 32.0
FAN23G1950 Fragaria x ananassa HOM05D000363 ORTHO05D000236 2.9e-06 57.4 100 35.0
FAN26G0454 Fragaria x ananassa HOM05D000363 ORTHO05D000236 2.9e-06 57.4 100 35.0
Glyma.13G182100 Glycine max HOM05D000363 ORTHO05D000236 5.0e-06 56.6 122 30.3
Nn1g06618 Nelumbo nucifera HOM05D000363 ORTHO05D000236 5.0e-06 56.6 129 31.8
FvH4_5g27600 Fragaria vesca HOM05D000363 ORTHO05D000236 6.6e-06 56.2 100 35.0
FAN13G1163 Fragaria x ananassa HOM05D000363 ORTHO05D000236 6.6e-06 56.2 100 36.0
FAN18G0326 Fragaria x ananassa HOM05D000363 ORTHO05D000236 6.6e-06 56.2 100 36.0
FAN26G2646 Fragaria x ananassa HOM05D000363 ORTHO05D000236 8.6e-06 55.8 100 34.0


User provided reference genes

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