Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_00186_v3 Cicer arietinum L. HOM05D007716 ORTHO05D009780 8.2e-85 317.0 158 100.0
TPR.G32644 Trifolium pratense HOM05D007716 ORTHO05D009780 1.1e-52 210.3 159 69.2
Psat1g212560 Pisum sativum HOM05D007716 ORTHO05D009780 6.5e-50 201.1 158 66.5
Medtr2g010200 Medicago truncatula HOM05D007716 ORTHO05D009780 5.5e-49 198.0 159 65.4
VMungo0540G1513 Vigna mungo HOM05D007716 ORTHO05D009780 1.2e-35 153.7 159 52.2
Lj6g0015505 Lotus japonicus HOM05D007716 ORTHO05D009780 1.7e-34 149.8 163 57.7
Glyma.13G254000 Glycine max HOM05D007716 ORTHO05D009780 1.0e-31 140.6 164 50.0
Lalb_Chr20g0122741 Lupinus albus HOM05D007716 ORTHO05D009780 3.0e-31 139.0 160 49.4
Glyma.15G060900 Glycine max HOM05D007716 ORTHO05D009780 5.2e-31 138.3 159 50.9
QL11p026900 Quercus lobata HOM05D007716 ORTHO05D009780 1.5e-30 136.7 165 47.3
Haze_10368 Corylus avellana HOM05D007716 ORTHO05D009780 4.4e-30 135.2 140 50.0
Phvul.006G198900 Phaseolus vulgaris HOM05D007716 ORTHO05D009780 5.7e-30 134.8 149 51.7
CiPaw.05G026000 Carya illinoinensis HOM05D007716 ORTHO05D009780 1.8e-28 129.8 131 52.7
arahy.Tifrunner.gnm1.ann1.84YYIV Arachis hypogaea HOM05D007716 ORTHO05D009780 7.0e-28 127.9 167 44.9
arahy.Tifrunner.gnm1.ann1.1SXR49 Arachis hypogaea HOM05D007716 ORTHO05D009780 1.6e-27 126.7 147 49.7
Hma1.2p1_0703F.1_g206280 Hydrangea macrophylla HOM05D007716 ORTHO05D009780 2.0e-27 126.3 168 47.0
Prupe.8G076600 Prunus persica HOM05D007716 ORTHO05D009780 1.5e-25 120.2 141 44.0
Potri.001G286200 Populus trichocarpa HOM05D007716 ORTHO05D009780 9.5e-25 117.5 146 47.3
Gohir.D12G040700 Gossypium hirsutum HOM05D007716 ORTHO05D009780 2.1e-24 116.3 124 47.6
Sabra16G0178700 Salix brachista HOM05D007716 ORTHO05D009780 2.8e-24 115.9 131 48.9
Atru.chr6.1374 Acer truncatum HOM05D007716 ORTHO05D009780 3.6e-24 115.5 160 41.9
Manes.10G092200 Manihot esculenta HOM05D007716 ORTHO05D009780 8.0e-24 114.4 116 48.3
Sabra09G0062200 Salix brachista HOM05D007716 ORTHO05D009780 1.0e-23 114.0 130 46.2
Gorai.008G042500 Gossypium raimondii HOM05D007716 ORTHO05D009780 1.4e-23 113.6 124 46.0
Gohir.A12G031600 Gossypium hirsutum HOM05D007716 ORTHO05D009780 2.3e-23 112.8 121 45.5
Potri.009G080400 Populus trichocarpa HOM05D007716 ORTHO05D009780 2.3e-23 112.8 131 47.3
Ciclev10029299m.g Citrus clementina HOM05D007716 ORTHO05D009780 3.1e-23 112.5 137 44.5
Solyc01g106380.2 Solanum lycopersicum HOM05D007716 ORTHO05D009780 5.2e-23 111.7 145 39.3
PGR142G1403 Punica granatum HOM05D007716 ORTHO05D009780 2.6e-22 109.4 156 39.7
CANSAT54G1223 Cannabis sativa HOM05D007716 ORTHO05D009780 3.4e-22 109.0 171 40.4
Aqoxy6G00623 Aquilegia oxysepala HOM05D000043 ORTHO05D002888 4.4e-22 108.6 112 47.3
Cc02_g20520 Coffea canephora HOM05D007716 ORTHO05D009780 4.4e-22 108.6 160 38.1
Cpa.g.sc20.53 Carica papaya HOM05D007716 ORTHO05D009780 7.5e-22 107.8 165 39.4
TAR628G0805 Trochodendron aralioides HOM05D007716 ORTHO05D009780 7.5e-22 107.8 138 49.3
Thecc.02G037300 Theobroma cacao HOM05D007716 ORTHO05D009780 1.7e-21 106.7 165 38.8
MSTRG.16641 Avicennia marina HOM05D007716 ORTHO05D009780 2.9e-21 105.9 130 43.1
Duzib132G0367 Durio zibethinus HOM05D007716 ORTHO05D009780 2.9e-21 105.9 127 45.7
Sopen01g048750 Solanum pennellii HOM05D007716 ORTHO05D009780 2.9e-21 105.9 138 41.3
Sed0024047 Sechium edule HOM05D007716 ORTHO05D009780 6.4e-21 104.8 133 43.6
FAN20G1331 Fragaria x ananassa HOM05D007716 ORTHO05D009780 8.3e-21 104.4 152 39.5
FAN24G2612 Fragaria x ananassa HOM05D007716 ORTHO05D009780 1.4e-20 103.6 152 39.5
Nn5g29758 Nelumbo nucifera HOM05D007716 ORTHO05D009780 1.4e-20 103.6 141 41.8
FAN27G0331 Fragaria x ananassa HOM05D007716 ORTHO05D009780 1.9e-20 103.2 151 38.4
Nitab4.5_0009020g0070 Nicotiana tabacum HOM05D007716 ORTHO05D009780 1.9e-20 103.2 119 45.4
RcHm_v2.0_Chr6g0269271 Rosa chinensis HOM05D007716 ORTHO05D009780 2.4e-20 102.8 138 44.2
ClCG10G009750 Citrullus lanatus HOM05D007716 ORTHO05D009780 4.1e-20 102.1 146 42.5
COL.COLO4_17851 Corchorus olitorius HOM05D007716 ORTHO05D009780 4.1e-20 102.1 138 43.5
Oeu059885.1 Olea europaea HOM05D007716 ORTHO05D009780 4.1e-20 102.1 130 46.2
FAN15G0824 Fragaria x ananassa HOM05D007716 ORTHO05D009780 5.4e-20 101.7 152 38.8
MD10G1057800 Malus domestica HOM05D007716 ORTHO05D009780 5.4e-20 101.7 124 46.0
FvH4_2g11070 Fragaria vesca HOM05D007716 ORTHO05D009780 7.0e-20 101.3 152 40.1
PGSC0003DMG400003116 Solanum tuberosum HOM05D007716 ORTHO05D009780 7.0e-20 101.3 146 38.4
TWI23G0541 Tripterygium wilfordii HOM05D007716 ORTHO05D009780 7.0e-20 101.3 131 42.0
Nitab4.5_0010352g0060 Nicotiana tabacum HOM05D007716 ORTHO05D009780 2.7e-19 99.4 119 43.7
Migut.B00514 Erythranthe guttata HOM05D007716 ORTHO05D009780 1.7e-18 96.7 123 42.3
Peaxi162Scf00299g00026 Petunia axillaris HOM05D007716 ORTHO05D009780 1.7e-18 96.7 128 43.0
vmacro01903 Vaccinium macrocarpon HOM05D001206 ORTHO05D002068 3.0e-18 95.9 103 47.6
SGA_v2.0_scaffold342G49411 Striga asiatica HOM05D007716 ORTHO05D009780 8.6e-18 94.4 132 40.9
PSO761G0345 Papaver somniferum HOM05D007716 ORTHO05D009780 1.5e-17 93.6 163 36.2
SalBow6G6774 Salvia bowleyana HOM05D007716 ORTHO05D009780 5.6e-17 91.7 102 42.2
Eucgr.I02564 Eucalyptus grandis HOM05D007716 ORTHO05D009780 9.5e-17 90.9 155 36.1
PSO210G3893 Papaver somniferum HOM05D007716 ORTHO05D009780 9.5e-17 90.9 125 39.2
AUR62027073 Chenopodium quinoa HOM05D007716 ORTHO05D009780 2.1e-16 89.7 134 33.6
AUR62043644 Chenopodium quinoa HOM05D007716 ORTHO05D009780 2.1e-16 89.7 134 33.6
THA.LOC104799649 Tarenaya hassleriana HOM05D007716 ORTHO05D009780 2.8e-16 89.4 124 46.0
AL8G41850 Arabidopsis lyrata HOM05D007716 ORTHO05D009780 4.7e-16 88.6 179 35.2
Actinidia02415 Actinidia chinensis HOM05D007716 ORTHO05D009780 6.2e-16 88.2 126 45.2
Lsat_1_v5_gn_7_83180 Lactuca sativa HOM05D007716 ORTHO05D009780 1.1e-15 87.4 80 45.0
AT5G64480 Arabidopsis thaliana HOM05D007716 ORTHO05D009780 2.3e-15 86.3 179 35.2
ECA236G5147 Erigeron canadensis HOM05D007716 ORTHO05D009780 3.1e-15 85.9 80 46.2
CDE04G3440 Ceratophyllum demersum HOM05D000620 ORTHO05D000537 4.0e-15 85.5 151 39.7
MBI16_g17833_MAGBIO Magnolia biondii HOM05D007716 ORTHO05D009780 8.9e-15 84.3 116 38.8
Ah.01g024230 Amaranthus hybridus HOM05D007716 ORTHO05D009780 1.5e-14 83.6 147 32.7
Sp2g27560 Schrenkiella parvula HOM05D007716 ORTHO05D009780 1.5e-14 83.6 184 35.9
BcaC01g02685 Brassica carinata HOM05D007716 ORTHO05D009780 5.8e-14 81.6 139 39.6
Eucgr.I02552 Eucalyptus grandis HOM05D007716 ORTHO05D009780 7.5e-14 81.3 133 38.3
Aa31LG1G17430 Aethionema arabicum HOM05D007716 ORTHO05D009780 9.8e-14 80.9 126 39.7
ATR0767G063 Amborella trichopoda HOM05D007716 ORTHO05D009780 9.8e-14 80.9 106 40.6
C03p61760 Brassica napus HOM05D007716 ORTHO05D009780 9.8e-14 80.9 183 34.4
BolC3t18437H Brassica oleracea HOM05D007716 ORTHO05D009780 9.8e-14 80.9 183 34.4
BraA06t26061Z Brassica rapa HOM05D007716 ORTHO05D009780 1.3e-13 80.5 185 34.1
CARHR278450 Cardamine hirsuta HOM05D007716 ORTHO05D009780 1.3e-13 80.5 183 34.4
A06p31220 Brassica napus HOM05D007716 ORTHO05D009780 1.7e-13 80.1 185 34.1
Carub.0008s2527 Capsella rubella HOM05D007716 ORTHO05D009780 2.9e-13 79.3 188 34.0
Dinv08960 Davidia involucrata HOM05D007716 ORTHO05D009780 2.9e-13 79.3 63 57.1
CsaV3_4G014630 Cucumis sativus L. HOM05D007716 ORTHO05D009780 3.7e-13 79.0 121 40.5
Sc14g0003580 Simmondsia chinensis HOM05D007716 ORTHO05D009780 6.4e-13 78.2 99 40.4
DCAR_029284 Daucus carota HOM05D007716 ORTHO05D009780 3.2e-12 75.9 115 38.3
Thhalv10004965m.g Eutrema salsugineum HOM05D007716 ORTHO05D009780 3.2e-12 75.9 189 33.3
unitig_61.g26045 Utricularia gibba HOM05D007716 ORTHO05D009780 3.2e-12 75.9 146 34.2
Lj9P341T42 Lonicera japonica HOM05D007716 ORTHO05D009780 2.7e-11 72.8 70 45.7
Peaxi162Scf00299g00025 Petunia axillaris HOM05D007716 ORTHO05D009780 7.8e-11 71.2 63 50.8
ATR0144G021 Amborella trichopoda HOM05D007716 ORTHO05D009780 3.1e-07 59.3 66 42.4
Actinidia23910 Actinidia chinensis HOM05D001242 ORTHO05D001089 4.0e-07 58.9 45 57.8
TAR376G1104 Trochodendron aralioides HOM05D007716 ORTHO05D009780 3.4e-06 55.8 60 48.3


User provided reference genes

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