Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_00163_v3 Cicer arietinum L. HOM05D003826 ORTHO05D004479 2.3e-102 375.6 189 100.0
TPR.G9500 Trifolium pratense HOM05D003826 ORTHO05D004479 2.7e-90 335.5 191 88.0
Medtr2g009600 Medicago truncatula HOM05D003826 ORTHO05D004479 1.3e-89 333.2 190 85.8
Psat1g214120 Pisum sativum HOM05D003826 ORTHO05D004479 1.6e-87 326.2 190 85.3
VMungo0540G1729 Vigna mungo HOM05D003826 ORTHO05D004479 9.1e-83 310.5 190 82.6
Lj6g0003535 Lotus japonicus HOM05D003826 ORTHO05D004479 1.6e-82 309.7 187 82.4
Glyma.13G256700 Glycine max HOM05D003826 ORTHO05D004479 4.5e-82 308.1 188 82.4
arahy.Tifrunner.gnm1.ann1.8F9AHD Arachis hypogaea HOM05D003826 ORTHO05D004479 1.0e-78 297.0 190 77.4
arahy.Tifrunner.gnm1.ann1.AL483W Arachis hypogaea HOM05D003826 ORTHO05D004479 1.0e-78 297.0 189 78.3
Ciclev10029337m.g Citrus clementina HOM05D003826 ORTHO05D004479 2.8e-76 288.9 187 77.0
Cfa005734 Carpinus fangiana HOM05D003826 ORTHO05D004479 3.7e-76 288.5 183 76.5
CiPaw.05G029600 Carya illinoinensis HOM05D003826 ORTHO05D004479 4.1e-75 285.0 183 75.4
Haze_10523 Corylus avellana HOM05D003826 ORTHO05D004479 2.7e-74 282.3 187 73.8
Manes.07G038200 Manihot esculenta HOM05D003826 ORTHO05D004479 7.8e-74 280.8 187 77.5
Atru.chr6.1261 Acer truncatum HOM05D003826 ORTHO05D004479 2.3e-73 279.3 187 74.3
Duzib052G0856 Durio zibethinus HOM05D003826 ORTHO05D004479 5.0e-73 278.1 189 74.1
Thecc.02G129300 Theobroma cacao HOM05D003826 ORTHO05D004479 5.0e-73 278.1 177 79.1
Atru.chr6.1269 Acer truncatum HOM05D003826 ORTHO05D004479 1.1e-72 276.9 187 73.8
TWI14G0912 Tripterygium wilfordii HOM05D003826 ORTHO05D004479 1.1e-72 276.9 189 74.6
Gorai.013G055500 Gossypium raimondii HOM05D003826 ORTHO05D004479 5.6e-72 274.6 182 74.2
MD05G1047400 Malus domestica HOM05D003826 ORTHO05D004479 7.3e-72 274.2 182 72.5
TWI59G0852 Tripterygium wilfordii HOM05D003826 ORTHO05D004479 7.3e-72 274.2 187 74.3
Gohir.A13G050900 Gossypium hirsutum HOM05D003826 ORTHO05D004479 1.2e-71 273.5 182 73.6
Phvul.006G202000 Phaseolus vulgaris HOM05D003826 ORTHO05D004479 1.2e-71 273.5 190 75.3
Prupe.8G069800 Prunus persica HOM05D003826 ORTHO05D004479 4.7e-71 271.6 171 77.8
QL11p025207 Quercus lobata HOM05D003826 ORTHO05D004479 8.0e-71 270.8 186 73.7
Eucgr.G00988 Eucalyptus grandis HOM05D003826 ORTHO05D004479 1.0e-70 270.4 187 72.7
ClCG09G016080 Citrullus lanatus HOM05D003826 ORTHO05D004479 1.8e-70 269.6 187 72.7
Manes.10G098600 Manihot esculenta HOM05D003826 ORTHO05D004479 1.5e-69 266.5 177 76.3
PGR042G0672 Punica granatum HOM05D003826 ORTHO05D004479 1.5e-69 266.5 186 71.0
CsaV3_7G006880 Cucumis sativus L. HOM05D003826 ORTHO05D004479 2.0e-69 266.2 187 72.2
FvH4_2g11710 Fragaria vesca HOM05D003826 ORTHO05D004479 2.6e-69 265.8 171 75.4
FAN24G2578 Fragaria x ananassa HOM05D003826 ORTHO05D004479 2.6e-69 265.8 171 75.4
Cpa.g.sc20.1 Carica papaya HOM05D003826 ORTHO05D004479 3.4e-69 265.4 169 78.7
Sed0006788 Sechium edule HOM05D003826 ORTHO05D004479 5.8e-69 264.6 183 72.1
MELO3C018606.2 Cucumis melo HOM05D003826 ORTHO05D004479 8.3e-68 260.8 189 72.0
Carub.0003s2836 Capsella rubella HOM05D003826 ORTHO05D004479 1.4e-67 260.0 184 69.0
Cc02_g20920 Coffea canephora HOM05D003826 ORTHO05D004479 2.4e-67 259.2 182 69.8
Thhalv10022868m.g Eutrema salsugineum HOM05D003826 ORTHO05D004479 5.4e-67 258.1 184 69.6
BcaB02g11486 Brassica carinata HOM05D003826 ORTHO05D004479 7.0e-67 257.7 184 69.0
Potri.017G043700 Populus trichocarpa HOM05D003826 ORTHO05D004479 7.0e-67 257.7 182 72.0
Sp3g27460 Schrenkiella parvula HOM05D003826 ORTHO05D004479 7.0e-67 257.7 186 68.3
CANSAT54G1150 Cannabis sativa HOM05D003826 ORTHO05D004479 1.2e-66 256.9 182 68.7
RcHm_v2.0_Chr6g0271011 Rosa chinensis HOM05D003826 ORTHO05D004479 1.2e-66 256.9 171 73.7
AL3G45800 Arabidopsis lyrata HOM05D003826 ORTHO05D004479 1.6e-66 256.5 186 67.7
CARHR104200 Cardamine hirsuta HOM05D003826 ORTHO05D004479 1.6e-66 256.5 184 68.5
Potri.017G043900 Populus trichocarpa HOM05D003826 ORTHO05D004479 2.7e-66 255.8 171 73.7
TAR628G1674 Trochodendron aralioides HOM05D003826 ORTHO05D004479 3.5e-66 255.4 170 75.3
BolC9t54449H Brassica oleracea HOM05D003826 ORTHO05D004479 6.0e-66 254.6 184 67.9
Sabra17G0029800 Salix brachista HOM05D003826 ORTHO05D004479 1.3e-65 253.4 182 71.4
A09p13020 Brassica napus HOM05D003826 ORTHO05D004479 3.0e-65 252.3 184 66.8
C09p15420 Brassica napus HOM05D003826 ORTHO05D004479 3.0e-65 252.3 184 66.8
BraA09t36947Z Brassica rapa HOM05D003826 ORTHO05D004479 3.0e-65 252.3 184 66.8
Aa31LG8G12520 Aethionema arabicum HOM05D003826 ORTHO05D004479 3.9e-65 251.9 184 68.5
BcaC04g22775 Brassica carinata HOM05D003826 ORTHO05D004479 3.9e-65 251.9 184 66.8
Lj5A230G39 Lonicera japonica HOM05D003826 ORTHO05D004479 3.9e-65 251.9 155 79.4
Oeu042406.1 Olea europaea HOM05D003826 ORTHO05D004479 3.9e-65 251.9 186 67.7
Nn1g05569 Nelumbo nucifera HOM05D003826 ORTHO05D004479 5.0e-65 251.5 172 73.3
Actinidia28031 Actinidia chinensis HOM05D003826 ORTHO05D004479 1.1e-64 250.4 170 72.9
Rhsim05G0101900 Rhododendron simsii HOM05D003826 ORTHO05D004479 1.1e-64 250.4 170 74.1
Hma1.2p1_0908F.1_g235485 Hydrangea macrophylla HOM05D003826 ORTHO05D004479 1.5e-64 250.0 169 72.8
vmacro19957 Vaccinium macrocarpon HOM05D003826 ORTHO05D004479 1.9e-64 249.6 170 73.5
COL.COLO4_32389 Corchorus olitorius HOM05D003826 ORTHO05D004479 2.5e-64 249.2 188 69.7
MBI16_g12461_MAGBIO Magnolia biondii HOM05D003826 ORTHO05D004479 3.3e-64 248.8 175 72.6
Sed0018824 Sechium edule HOM05D003826 ORTHO05D004479 3.3e-64 248.8 168 74.4
Phvul.002G212900 Phaseolus vulgaris HOM05D003826 ORTHO05D004479 4.3e-64 248.4 173 69.4
CSS0016886 Camellia sinensis var. sinensis HOM05D003826 ORTHO05D004479 5.6e-64 248.1 170 72.9
CSS0036052 Camellia sinensis var. sinensis HOM05D003826 ORTHO05D004479 5.6e-64 248.1 170 72.9
THA.LOC104807183 Tarenaya hassleriana HOM05D003826 ORTHO05D004479 7.3e-64 247.7 171 69.6
Migut.B00552 Erythranthe guttata HOM05D003826 ORTHO05D004479 9.5e-64 247.3 167 72.5
Aqoxy6G00874 Aquilegia oxysepala HOM05D003826 ORTHO05D004479 1.6e-63 246.5 172 72.1
MSTRG.27816 Avicennia marina HOM05D003826 ORTHO05D004479 3.6e-63 245.4 182 65.9
CAN.G997.2 Capsicum annuum HOM05D003826 ORTHO05D004479 3.6e-63 245.4 184 66.3
PGSC0003DMG400033580 Solanum tuberosum HOM05D003826 ORTHO05D004479 4.7e-63 245.0 184 66.8
GSVIVG01015652001 Vitis vinifera HOM05D003826 ORTHO05D004479 4.7e-63 245.0 165 74.5
Sc18g0007060 Simmondsia chinensis HOM05D003826 ORTHO05D004479 8.0e-63 244.2 175 70.9
Solyc01g105970.3 Solanum lycopersicum HOM05D003826 ORTHO05D004479 8.0e-63 244.2 184 66.8
Sopen01g048350 Solanum pennellii HOM05D003826 ORTHO05D004479 8.0e-63 244.2 184 66.8
Dinv24149 Davidia involucrata HOM05D003826 ORTHO05D004479 1.1e-62 243.8 167 74.9
Lj4g0024713 Lotus japonicus HOM05D003826 ORTHO05D004479 1.1e-62 243.8 172 70.3
PSO541G0595 Papaver somniferum HOM05D003826 ORTHO05D004479 1.1e-62 243.8 175 70.3
CDE04G3107 Ceratophyllum demersum HOM05D003826 ORTHO05D004479 3.1e-62 242.3 167 72.5
Medtr4g093560 Medicago truncatula HOM05D003826 ORTHO05D004479 3.1e-62 242.3 173 68.8
TAR376G0575 Trochodendron aralioides HOM05D003826 ORTHO05D004479 3.1e-62 242.3 170 72.4
Lalb_Chr16g0382941 Lupinus albus HOM05D003826 ORTHO05D004479 4.0e-62 241.9 168 69.0
MSTRG.20281 Avicennia marina HOM05D003826 ORTHO05D004479 5.2e-62 241.5 170 70.0
Nitab4.5_0011038g0020 Nicotiana tabacum HOM05D003826 ORTHO05D004479 8.9e-62 240.7 184 65.8
Psat7g101120 Pisum sativum HOM05D003826 ORTHO05D004479 1.5e-61 240.0 173 68.8
Migut.N01096 Erythranthe guttata HOM05D003826 ORTHO05D004479 2.6e-61 239.2 176 63.1
HanXRQChr08g0227191 Helianthus annuus HOM05D003826 ORTHO05D004479 3.4e-61 238.8 170 67.6
DCAR_003601 Daucus carota HOM05D003826 ORTHO05D004479 5.8e-61 238.0 172 69.8
Nitab4.5_0008998g0010 Nicotiana tabacum HOM05D003826 ORTHO05D004479 5.8e-61 238.0 181 64.6
Glyma.15G058200 Glycine max HOM05D003826 ORTHO05D004479 7.5e-61 237.7 176 71.6
Nitab4.5_0002017g0010 Nicotiana tabacum HOM05D003826 ORTHO05D004479 9.8e-61 237.3 181 65.2
Zm00001eb215290 Zea mays HOM05D003826 ORTHO05D004479 9.8e-61 237.3 168 70.2
PGSC0003DMG400031403 Solanum tuberosum HOM05D003826 ORTHO05D004479 2.9e-60 235.7 179 64.2
EL10Ac9g22073 Beta vulgaris HOM05D003826 ORTHO05D004479 4.9e-60 235.0 176 67.6
PGR102G1409 Punica granatum HOM05D003826 ORTHO05D004479 4.9e-60 235.0 169 71.0
unitig_37.g12793 Utricularia gibba HOM05D003826 ORTHO05D004479 4.9e-60 235.0 183 61.7
Duzib147G0892 Durio zibethinus HOM05D003826 ORTHO05D004479 8.3e-60 234.2 169 71.0
Os03g0737400 Oryza sativa ssp. japonica HOM05D003826 ORTHO05D004479 8.3e-60 234.2 170 67.6
arahy.Tifrunner.gnm1.ann1.8NDV1J Arachis hypogaea HOM05D003826 ORTHO05D004479 1.9e-59 233.0 173 65.3
ECA236G1467 Erigeron canadensis HOM05D003826 ORTHO05D000778 1.9e-59 233.0 170 65.9
Glyma.07G181900 Glycine max HOM05D003826 ORTHO05D004479 1.9e-59 233.0 173 65.3
arahy.Tifrunner.gnm1.ann1.JLXM4S Arachis hypogaea HOM05D003826 ORTHO05D004479 2.4e-59 232.6 172 68.6
arahy.Tifrunner.gnm1.ann1.QQ8XF2 Arachis hypogaea HOM05D003826 ORTHO05D004479 2.4e-59 232.6 172 68.6
Lalb_Chr05g0216361 Lupinus albus HOM05D003826 ORTHO05D004479 3.2e-59 232.3 172 68.6
Manes.12G126200 Manihot esculenta HOM05D003826 ORTHO05D004479 5.4e-59 231.5 174 67.8
TPR.G2887 Trifolium pratense HOM05D003826 ORTHO05D004479 5.4e-59 231.5 173 65.3
CSS0050337 Camellia sinensis var. sinensis HOM05D003826 ORTHO05D004479 9.2e-59 230.7 159 71.7
arahy.Tifrunner.gnm1.ann1.MWC9N2 Arachis hypogaea HOM05D001561 ORTHO05D001715 2.1e-58 229.6 173 65.3
Thecc.01G090400 Theobroma cacao HOM05D003826 ORTHO05D004479 4.6e-58 228.4 171 67.8
Cpa.g.sc55.25 Carica papaya HOM05D003826 ORTHO05D004479 7.8e-58 227.6 172 68.0
Gorai.008G017400 Gossypium raimondii HOM05D003826 ORTHO05D004479 1.0e-57 227.3 175 68.6
Peaxi162Scf00003g03230 Petunia axillaris HOM05D003826 ORTHO05D004479 1.7e-57 226.5 183 62.3
MD01G1039300 Malus domestica HOM05D003826 ORTHO05D004479 6.6e-57 224.6 172 66.3
Prupe.6G201600 Prunus persica HOM05D003826 ORTHO05D004479 6.6e-57 224.6 171 68.4
Atru.chr3.1247 Acer truncatum HOM05D003826 ORTHO05D004479 8.6e-57 224.2 169 65.1
Dinv13602 Davidia involucrata HOM05D003826 ORTHO05D004479 1.5e-56 223.4 160 70.0
Cfa006882 Carpinus fangiana HOM05D003826 ORTHO05D004479 1.9e-56 223.0 167 68.3
unitig_46.g18833 Utricularia gibba HOM05D003826 ORTHO05D004479 3.3e-56 222.2 170 64.7
Gohir.D12G017100 Gossypium hirsutum HOM05D003826 ORTHO05D004479 4.3e-56 221.9 178 66.9
Ah.03g139970 Amaranthus hybridus HOM05D003826 ORTHO05D004479 5.6e-56 221.5 158 69.6
SEGI_37389 Sequoiadendron giganteum HOM05D003826 ORTHO05D004479 7.3e-56 221.1 163 65.6
FvH4_1g19640 Fragaria vesca HOM05D003826 ORTHO05D004479 1.2e-55 220.3 172 66.3
FAN19G1458 Fragaria x ananassa HOM05D003826 ORTHO05D004479 1.2e-55 220.3 172 66.3
Hma1.2p1_1058F.1_g252870 Hydrangea macrophylla HOM05D003826 ORTHO05D004479 1.6e-55 219.9 161 68.9
Haze_03870 Corylus avellana HOM05D003826 ORTHO05D004479 2.8e-55 219.2 167 66.5
FAN23G0964 Fragaria x ananassa HOM05D003826 ORTHO05D004479 4.7e-55 218.4 165 67.9
FAN26G3235 Fragaria x ananassa HOM05D003826 ORTHO05D004479 4.7e-55 218.4 165 67.9
HPP92_016899 Vanilla planifolia HOM05D003826 ORTHO05D004479 2.3e-54 216.1 165 64.8
Cc07_g14100 Coffea canephora HOM05D003826 ORTHO05D004479 6.8e-54 214.5 170 64.1
CiPaw.07G047500 Carya illinoinensis HOM05D003826 ORTHO05D004479 1.5e-53 213.4 162 67.9
FAN28G0881 Fragaria x ananassa HOM05D003826 ORTHO05D004479 1.3e-52 210.3 179 63.1
SMO271G0099 Selaginella moellendorffii HOM05D003826 ORTHO05D004479 6.4e-52 208.0 164 60.4
AagrBONN_evm.TU.Sc2ySwM_362.1195 Anthoceros agrestis HOM05D003826 ORTHO05D004479 1.9e-51 206.5 157 63.1
AUR62003663 Chenopodium quinoa HOM05D003826 ORTHO05D004479 1.6e-50 203.4 160 63.1
Mapoly0042s0019 Marchantia polymorpha HOM05D003826 ORTHO05D004479 2.1e-50 203.0 155 63.9
AT2G14110 Arabidopsis thaliana HOM05D003826 ORTHO05D004479 3.5e-50 202.2 131 72.5
Peaxi162Scf00299g00634 Petunia axillaris HOM05D003826 ORTHO05D004479 6.0e-50 201.4 179 57.0
Lsat_1_v5_gn_7_82781 Lactuca sativa HOM05D003826 ORTHO05D004479 1.0e-49 200.7 170 61.8
CANSAT01G0714 Cannabis sativa HOM05D003826 ORTHO05D004479 3.0e-49 199.1 164 62.8
SGA_v2.0_scaffold83G26375 Striga asiatica HOM05D003826 ORTHO05D004479 1.1e-48 197.2 131 71.8
Pp3c1_28610 Physcomitrium patens HOM05D003826 ORTHO05D004479 1.5e-48 196.8 159 57.9
RcHm_v2.0_Chr2g0111211 Rosa chinensis HOM05D003826 ORTHO05D004479 4.3e-48 195.3 166 62.0
Os03g0737300 Oryza sativa ssp. japonica HOM05D003826 ORTHO05D004479 1.2e-47 193.7 175 57.7
Mapoly0032s0046 Marchantia polymorpha HOM05D003826 ORTHO05D004479 3.6e-47 192.2 164 57.3
Lj5A230G40 Lonicera japonica HOM05D003826 ORTHO05D004479 1.8e-46 189.9 159 62.3
Nitab4.5_0002095g0060 Nicotiana tabacum HOM05D003826 ORTHO05D004479 5.2e-46 188.3 151 62.9
GSVIVG01015647001 Vitis vinifera HOM05D003826 ORTHO05D004479 3.5e-42 175.6 138 68.1
Hund00378 Selenicereus undatus HOM05D003826 ORTHO05D004479 5.1e-41 171.8 134 70.1
Os11g0434000 Oryza sativa ssp. japonica HOM05D003826 ORTHO05D004479 6.6e-41 171.4 160 56.2
SalBow6G1284 Salvia bowleyana HOM05D003826 ORTHO05D004479 8.7e-41 171.0 156 59.0
ATR0767G082 Amborella trichopoda HOM05D003826 ORTHO05D004479 1.5e-40 170.2 130 70.0
CBR_g26273 Chara braunii HOM05D003826 ORTHO05D004479 9.6e-40 167.5 162 50.6
ATR0767G074 Amborella trichopoda HOM05D003826 ORTHO05D004479 2.1e-39 166.4 128 69.5
Ah.01g023970 Amaranthus hybridus HOM05D003826 ORTHO05D004479 4.7e-39 165.2 163 54.6
RhsimUnG0154900 Rhododendron simsii HOM05D003826 ORTHO05D004479 4.7e-39 165.2 156 60.3
Hund16529 Selenicereus undatus HOM05D003826 ORTHO05D004479 1.4e-38 163.7 124 66.9
SalBow8G4107 Salvia bowleyana HOM05D003826 ORTHO05D004479 2.4e-38 162.9 180 50.6
AUR62012887 Chenopodium quinoa HOM05D003826 ORTHO05D004479 7.6e-37 157.9 163 53.4
AUR62027111 Chenopodium quinoa HOM05D003826 ORTHO05D004479 7.6e-37 157.9 163 53.4
Lalb_Chr18g0060401 Lupinus albus HOM05D003826 ORTHO05D004479 6.6e-33 144.8 171 50.9
GSVIVG01015646001 Vitis vinifera HOM05D003826 ORTHO05D004479 1.6e-31 140.2 116 65.5
AUR62017972 Chenopodium quinoa HOM05D003826 ORTHO05D004479 2.1e-31 139.8 97 73.2
VMungo0251G2759 Vigna mungo HOM05D003826 ORTHO05D004479 1.5e-29 133.7 91 68.1
Mapoly0010s0051 Marchantia polymorpha HOM05D003826 ORTHO05D004479 2.0e-29 133.3 148 43.9
Ciclev10026755m.g Citrus clementina HOM05D003826 ORTHO05D004479 2.9e-28 129.4 88 73.9
Nn5g29884 Nelumbo nucifera HOM05D003826 ORTHO05D004479 7.1e-27 124.8 89 70.8
Solyc10g047310.1 Solanum lycopersicum HOM05D003826 ORTHO05D004479 3.0e-25 119.4 94 57.4
MD10G1054300 Malus domestica HOM05D003826 ORTHO05D004479 4.0e-22 109.0 67 71.6
Gohir.D13G049650 Gossypium hirsutum HOM05D003826 ORTHO05D004479 1.1e-16 90.9 65 69.2
Mapoly0042s0017 Marchantia polymorpha HOM05D003826 ORTHO05D004479 7.4e-16 88.2 79 57.0
THA.LOC104824951 Tarenaya hassleriana HOM05D003826 ORTHO05D004479 1.3e-09 67.4 103 41.7
MCO11G520 Micromonas commoda HOM05D003826 ORTHO05D004479 2.3e-09 66.6 173 29.5
Cre09.g401738 Chlamydomonas reinhardtii HOM05D003826 ORTHO05D004479 6.7e-09 65.1 184 29.3
Glyma.08G067900 Glycine max HOM05D003826 ORTHO05D004479 1.9e-08 63.5 59 54.2
Sopen10g017590 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-08 63.5 69 47.8
FAN15G0689 Fragaria x ananassa HOM05D003826 ORTHO05D004479 2.2e-07 60.1 33 75.8
Gorai.002G159200 Gossypium raimondii HOM05D028424 ORTHO05D219023 2.2e-07 60.1 32 84.4
Dinv36604 Davidia involucrata HOM05D003826 ORTHO05D004479 4.8e-07 58.9 33 75.8
Gohir.D12G069601 Gossypium hirsutum HOM05D001733 ORTHO05D047820 2.4e-06 56.6 32 81.2
Gorai.008G076300 Gossypium raimondii HOM05D001733 ORTHO05D047820 6.9e-06 55.1 32 78.1


User provided reference genes

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