Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_00014_v3 Cicer arietinum L. HOM05D003079 ORTHO05D003461 2.2e-112 409.1 221 100.0
Ca_19985_v3 Cicer arietinum L. HOM05D003079 ORTHO05D003461 6.8e-45 184.9 163 67.5
TPR.G16690 Trifolium pratense HOM05D003079 ORTHO05D003461 5.9e-33 145.2 172 53.5
Psat5g231200 Pisum sativum HOM05D003079 ORTHO05D003461 2.1e-30 136.7 141 61.0
Medtr3g009740 Medicago truncatula HOM05D003079 ORTHO05D003461 6.4e-27 125.2 141 53.2
Lj3g0020124 Lotus japonicus HOM05D003079 ORTHO05D003461 1.2e-25 120.9 183 45.4
Glyma.04G113700 Glycine max HOM05D003079 ORTHO05D003461 5.6e-23 112.1 141 50.4
arahy.Tifrunner.gnm1.ann1.FC0SK2 Arachis hypogaea HOM05D003079 ORTHO05D003461 7.3e-23 111.7 141 51.1
Phvul.L001609 Phaseolus vulgaris HOM05D003079 ORTHO05D003461 9.5e-23 111.3 141 52.5
Glyma.06G321400 Glycine max HOM05D003079 ORTHO05D003461 3.6e-22 109.4 141 50.4
arahy.Tifrunner.gnm1.ann1.WAW8B8 Arachis hypogaea HOM05D003079 ORTHO05D003461 8.1e-22 108.2 141 49.6
VMungo1080G0483 Vigna mungo HOM05D003079 ORTHO05D003461 1.8e-21 107.1 145 49.7
Manes.05G204700 Manihot esculenta HOM05D003079 ORTHO05D003461 2.5e-15 86.7 141 41.1
Haze_09917 Corylus avellana HOM05D003079 ORTHO05D003461 3.3e-15 86.3 133 44.4
Potri.011G169000 Populus trichocarpa HOM05D003079 ORTHO05D003461 9.5e-15 84.7 140 39.3
COL.COLO4_07790 Corchorus olitorius HOM05D003079 ORTHO05D003461 1.4e-13 80.9 139 36.7
RcHm_v2.0_Chr5g0074601 Rosa chinensis HOM05D003079 ORTHO05D003461 4.0e-13 79.3 141 39.0
Potri.001G472000 Populus trichocarpa HOM05D003079 ORTHO05D003461 5.2e-13 79.0 142 38.0
Thecc.07G001500 Theobroma cacao HOM05D003079 ORTHO05D003461 5.2e-13 79.0 149 35.6
CiPaw.12G142700 Carya illinoinensis HOM05D003079 ORTHO05D003461 4.4e-12 75.9 135 37.8
CiPaw.12G142800 Carya illinoinensis HOM05D003079 ORTHO05D003461 4.4e-12 75.9 135 37.8
CANSAT11G2157 Cannabis sativa HOM05D003079 ORTHO05D003461 5.8e-12 75.5 141 33.3
Ca_27381_v3 Cicer arietinum L. HOM05D002502 ORTHO05D013571 7.6e-12 75.1 65 67.7
Duzib170G0955 Durio zibethinus HOM05D003079 ORTHO05D003461 7.6e-12 75.1 141 35.5
FAN25G3298 Fragaria x ananassa HOM05D003079 ORTHO05D003461 9.9e-12 74.7 141 35.5
FAN21G1152 Fragaria x ananassa HOM05D003079 ORTHO05D003461 1.3e-11 74.3 141 35.5
FAN16G0740 Fragaria x ananassa HOM05D003079 ORTHO05D003461 1.7e-11 73.9 141 34.8
Ca_13861_v3 Cicer arietinum L. HOM05D002031 ORTHO05D003557 2.2e-11 73.6 199 36.2
FvH4_3g41590 Fragaria vesca HOM05D003079 ORTHO05D003461 2.9e-11 73.2 141 35.5
FAN11G0995 Fragaria x ananassa HOM05D003079 ORTHO05D003461 2.9e-11 73.2 141 35.5
Actinidia30351 Actinidia chinensis HOM05D003079 ORTHO05D003461 3.8e-11 72.8 139 33.8
CiPaw.12G142900 Carya illinoinensis HOM05D003079 ORTHO05D003461 6.4e-11 72.0 135 37.0
Duzib268G0697 Durio zibethinus HOM05D003079 ORTHO05D003461 6.4e-11 72.0 141 33.3
QL08p000493 Quercus lobata HOM05D003079 ORTHO05D003461 1.4e-10 70.9 141 36.9
CSS0018146 Camellia sinensis var. sinensis HOM05D003079 ORTHO05D003461 1.9e-10 70.5 136 34.6
Ca_26778_v3 Cicer arietinum L. HOM05D002502 ORTHO05D013571 2.4e-10 70.1 108 46.3
Ciclev10007777m.g Citrus clementina HOM05D003079 ORTHO05D003461 2.4e-10 70.1 127 37.8
Lalb_Chr18g0048661 Lupinus albus HOM05D003079 ORTHO05D003461 2.4e-10 70.1 132 41.7
Cc05_g15720 Coffea canephora HOM05D003079 ORTHO05D003461 4.1e-10 69.3 138 34.8
Psat4g111200 Pisum sativum HOM05D003079 ORTHO05D003461 5.4e-10 68.9 74 50.0
ClCG00G001200 Citrullus lanatus HOM05D003079 ORTHO05D003461 1.2e-09 67.8 136 33.8
ClCG10G003820 Citrullus lanatus HOM05D003079 ORTHO05D003461 1.2e-09 67.8 136 33.8
ClCG10G003930 Citrullus lanatus HOM05D003079 ORTHO05D003461 1.2e-09 67.8 136 33.8
Nn1g07629 Nelumbo nucifera HOM05D003079 ORTHO05D003461 2.1e-09 67.0 140 32.9
TWI39G1230 Tripterygium wilfordii HOM05D003079 ORTHO05D003461 2.7e-09 66.6 131 37.4
TAR627G0159 Trochodendron aralioides HOM05D003079 ORTHO05D003461 2.7e-09 66.6 141 36.2
THA.LOC104811703 Tarenaya hassleriana HOM05D003079 ORTHO05D003461 3.5e-09 66.2 147 31.3
Ca_21034_v3 Cicer arietinum L. HOM05D002031 ORTHO05D003557 4.6e-09 65.9 87 50.6
Ca_26148_v3 Cicer arietinum L. HOM05D002502 ORTHO05D013571 4.6e-09 65.9 87 49.4
MELO3C014061.2 Cucumis melo HOM05D003079 ORTHO05D003461 4.6e-09 65.9 136 33.1
CsaV3_3G003800 Cucumis sativus L. HOM05D003079 ORTHO05D003461 4.6e-09 65.9 141 33.3
TPR.G28965 Trifolium pratense HOM05D003079 ORTHO05D003461 4.6e-09 65.9 98 39.8
Ca_25736_v3 Cicer arietinum L. HOM05D002502 ORTHO05D013571 7.8e-09 65.1 92 46.7
Lalb_Chr04g0259441 Lupinus albus HOM05D003079 ORTHO05D003461 7.8e-09 65.1 141 36.9
Ca_03472_v3 Cicer arietinum L. HOM05D002502 ORTHO05D013571 1.3e-08 64.3 131 38.2
GSVIVG01014846001 Vitis vinifera HOM05D003079 ORTHO05D003461 1.3e-08 64.3 139 34.5
Ca_27198_v3 Cicer arietinum L. HOM05D002502 ORTHO05D013571 1.7e-08 63.9 86 48.8
Eucgr.F03644 Eucalyptus grandis HOM05D003079 ORTHO05D003461 1.7e-08 63.9 129 36.4
TWI38G1795 Tripterygium wilfordii HOM05D003079 ORTHO05D003461 1.7e-08 63.9 141 34.8
Ca_19739_v3 Cicer arietinum L. HOM05D002502 ORTHO05D000001 2.3e-08 63.5 113 39.8
Lj8C183T12 Lonicera japonica HOM05D003079 ORTHO05D003461 2.3e-08 63.5 132 32.6
Gorai.007G310000 Gossypium raimondii HOM05D003079 ORTHO05D003461 3.0e-08 63.2 143 32.2
TWI14G0136 Tripterygium wilfordii HOM05D003079 ORTHO05D003461 3.0e-08 63.2 131 36.6
Gohir.A13G128400 Gossypium hirsutum HOM05D003079 ORTHO05D003461 3.9e-08 62.8 141 31.9
Sabra11G0137800 Salix brachista HOM05D003079 ORTHO05D003461 3.9e-08 62.8 101 38.6
vmacro11641 Vaccinium macrocarpon HOM05D003079 ORTHO05D003461 3.9e-08 62.8 133 31.6
Ca_04929_v3 Cicer arietinum L. HOM05D004299 ORTHO05D003557 8.6e-08 61.6 212 32.5
Gohir.D11G286600 Gossypium hirsutum HOM05D003079 ORTHO05D003461 8.6e-08 61.6 143 31.5
Gohir.A11G276200 Gossypium hirsutum HOM05D003079 ORTHO05D003461 1.1e-07 61.2 143 30.8
Ca_23029_v3 Cicer arietinum L. HOM05D002502 ORTHO05D013571 2.5e-07 60.1 146 40.4
Ca_23031_v3 Cicer arietinum L. HOM05D002502 ORTHO05D013571 2.5e-07 60.1 146 40.4
Gorai.013G147800 Gossypium raimondii HOM05D003079 ORTHO05D003461 2.5e-07 60.1 141 31.9
Sed0022199 Sechium edule HOM05D003079 ORTHO05D003461 2.5e-07 60.1 138 31.9
Gohir.D13G131800 Gossypium hirsutum HOM05D003079 ORTHO05D003461 5.6e-07 58.9 141 31.9
Atru.chr2.3897 Acer truncatum HOM05D003079 ORTHO05D003461 7.3e-07 58.5 74 43.2
Ca_23665_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 9.6e-07 58.2 86 46.5
PSO063G6668 Papaver somniferum HOM05D003079 ORTHO05D003461 1.2e-06 57.8 192 27.6
PSO782G1655 Papaver somniferum HOM05D003079 ORTHO05D003461 1.2e-06 57.8 192 28.1
MD11G1046100 Malus domestica HOM05D003079 ORTHO05D003461 1.6e-06 57.4 189 25.9
Sed0005838 Sechium edule HOM05D003079 ORTHO05D003461 1.6e-06 57.4 138 31.9
Ca_17168_v3 Cicer arietinum L. HOM05D002502 ORTHO05D013571 2.1e-06 57.0 38 76.3
Nitab4.5_0009408g0020 Nicotiana tabacum HOM05D003079 ORTHO05D003461 2.1e-06 57.0 131 32.8
Peaxi162Scf00232g00614 Petunia axillaris HOM05D003079 ORTHO05D003461 2.1e-06 57.0 141 29.1
Ca_22364_v3 Cicer arietinum L. HOM05D002502 ORTHO05D013571 2.8e-06 56.6 44 68.2
Ca_03002_v3 Cicer arietinum L. HOM05D002502 ORTHO05D013571 3.6e-06 56.2 179 35.2
Ca_02573_v3 Cicer arietinum L. HOM05D002502 ORTHO05D000001 4.7e-06 55.8 86 45.3
Actinidia31529 Actinidia chinensis HOM05D003079 ORTHO05D003461 6.2e-06 55.5 124 33.1
Nitab4.5_0000152g0030 Nicotiana tabacum HOM05D003079 ORTHO05D003461 8.1e-06 55.1 131 32.1
Nitab4.5_0003570g0050 Nicotiana tabacum HOM05D003079 ORTHO05D003461 8.1e-06 55.1 173 28.9
TAR626G1036 Trochodendron aralioides HOM05D003079 ORTHO05D003461 8.1e-06 55.1 100 40.0


User provided reference genes

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