Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_00011_v3 Cicer arietinum L. HOM05D006167 ORTHO05D007635 1.6e-25 118.6 61 100.0
Ca_26216_v3 Cicer arietinum L. HOM05D006167 ORTHO05D007635 6.9e-24 113.2 61 95.1
Psat6g109400 Pisum sativum HOM05D006167 ORTHO05D007635 3.0e-19 97.8 61 78.7
Glyma.20G081600 Glycine max HOM05D006167 ORTHO05D007635 3.7e-17 90.9 61 70.5
Lj4g0015547 Lotus japonicus HOM05D006167 ORTHO05D007635 3.7e-17 90.9 62 75.8
TPR.G23974 Trifolium pratense HOM05D006167 ORTHO05D007635 2.6e-15 84.7 61 72.1
Lalb_Chr03g0036881 Lupinus albus HOM05D006167 ORTHO05D007635 1.3e-14 82.4 58 70.7
CANSAT78G0928 Cannabis sativa HOM05D006167 ORTHO05D007635 1.9e-13 78.6 59 67.8
Cfa014825 Carpinus fangiana HOM05D006167 ORTHO05D007635 2.5e-13 78.2 58 63.8
Phvul.007G232600 Phaseolus vulgaris HOM05D006167 ORTHO05D007635 5.5e-13 77.0 61 67.2
Atru.chr4.1872 Acer truncatum HOM05D006167 ORTHO05D007635 7.2e-13 76.6 58 63.8
CANSAT54G0143 Cannabis sativa HOM05D006167 ORTHO05D007635 9.4e-13 76.3 58 67.2
CiPaw.01G175200 Carya illinoinensis HOM05D006167 ORTHO05D007635 1.6e-12 75.5 58 62.1
HanXRQChr13g0410431 Helianthus annuus HOM05D006167 ORTHO05D007635 1.6e-12 75.5 60 63.3
Prupe.1G052700 Prunus persica HOM05D006167 ORTHO05D007635 2.1e-12 75.1 58 67.2
Lsat_1_v5_gn_1_76160 Lactuca sativa HOM05D006167 ORTHO05D007635 2.7e-12 74.7 60 63.3
Hma1.2p1_0112F.1_g054980 Hydrangea macrophylla HOM05D006167 ORTHO05D007635 4.6e-12 73.9 57 59.6
ClCG06G007470 Citrullus lanatus HOM05D006167 ORTHO05D007635 6.1e-12 73.6 58 60.3
CsaV3_2G012210 Cucumis sativus L. HOM05D006167 ORTHO05D007635 6.1e-12 73.6 58 60.3
BcaB04g17822 Brassica carinata HOM05D006167 ORTHO05D007635 7.9e-12 73.2 58 58.6
BcaC07g37498 Brassica carinata HOM05D006167 ORTHO05D007635 7.9e-12 73.2 58 58.6
A08p07960 Brassica napus HOM05D006167 ORTHO05D007635 7.9e-12 73.2 58 58.6
BolC8t47817H Brassica oleracea HOM05D006167 ORTHO05D007635 7.9e-12 73.2 58 58.6
BraA08t32818Z Brassica rapa HOM05D006167 ORTHO05D007635 7.9e-12 73.2 58 58.6
MELO3C023070.2 Cucumis melo HOM05D006167 ORTHO05D007635 7.9e-12 73.2 58 58.6
Sed0006558 Sechium edule HOM05D006167 ORTHO05D007635 1.0e-11 72.8 58 62.1
AL7G43090 Arabidopsis lyrata HOM05D006167 ORTHO05D007635 1.4e-11 72.4 58 60.3
Eucgr.H02882 Eucalyptus grandis HOM05D006167 ORTHO05D007635 1.4e-11 72.4 59 62.7
Thhalv10026745m.g Eutrema salsugineum HOM05D006167 ORTHO05D007635 1.8e-11 72.0 58 58.6
Potri.010G063100 Populus trichocarpa HOM05D006167 ORTHO05D007635 1.8e-11 72.0 58 60.3
PGR004G2513 Punica granatum HOM05D006167 ORTHO05D007635 1.8e-11 72.0 58 60.3
AT4G13520 Arabidopsis thaliana HOM05D006167 ORTHO05D007635 2.3e-11 71.6 58 60.3
Carub.0007s2902 Capsella rubella HOM05D006167 ORTHO05D007635 2.3e-11 71.6 58 58.6
Potri.008G174000 Populus trichocarpa HOM05D006167 ORTHO05D007635 2.3e-11 71.6 58 60.3
Sp7g11110 Schrenkiella parvula HOM05D006167 ORTHO05D007635 2.3e-11 71.6 58 56.9
THA.LOC109117012 Tarenaya hassleriana HOM05D006167 ORTHO05D007635 3.0e-11 71.2 58 58.6
TWI09G0967 Tripterygium wilfordii HOM05D006167 ORTHO05D007635 3.0e-11 71.2 58 60.3
TAR362G1146 Trochodendron aralioides HOM05D006167 ORTHO05D007635 3.9e-11 70.9 53 66.0
FvH4_4g05200 Fragaria vesca HOM05D006167 ORTHO05D007635 8.8e-11 69.7 59 55.9
CARHR219150 Cardamine hirsuta HOM05D006167 ORTHO05D007635 1.1e-10 69.3 58 56.9
Hma1.2p1_0144F.1_g065120 Hydrangea macrophylla HOM05D006167 ORTHO05D007635 1.1e-10 69.3 58 56.9
Actinidia32969 Actinidia chinensis HOM05D006167 ORTHO05D007635 2.6e-10 68.2 60 58.3
CSS0017011 Camellia sinensis var. sinensis HOM05D006167 ORTHO05D007635 2.6e-10 68.2 58 56.9
CSS0046609 Camellia sinensis var. sinensis HOM05D006167 ORTHO05D007635 2.6e-10 68.2 58 56.9
Cpa.g.sc59.38 Carica papaya HOM05D006167 ORTHO05D007635 3.3e-10 67.8 58 53.4
Dinv29784 Davidia involucrata HOM05D006167 ORTHO05D007635 3.3e-10 67.8 58 53.4
FAN12G1688 Fragaria x ananassa HOM05D006167 ORTHO05D007635 3.3e-10 67.8 59 54.2
FAN17G0547 Fragaria x ananassa HOM05D006167 ORTHO05D007635 3.3e-10 67.8 59 54.2
THA.LOC109116489 Tarenaya hassleriana HOM05D006167 ORTHO05D007635 3.3e-10 67.8 58 53.4
THA.LOC109116515 Tarenaya hassleriana HOM05D006167 ORTHO05D007635 3.3e-10 67.8 58 53.4
AL5G12040 Arabidopsis lyrata HOM05D006167 ORTHO05D007635 4.4e-10 67.4 58 56.9
AL5G12300 Arabidopsis lyrata HOM05D006167 ORTHO05D007635 4.4e-10 67.4 58 56.9
Nn1g03031 Nelumbo nucifera HOM05D006167 ORTHO05D007635 4.4e-10 67.4 55 54.5
Aa31LG9G4150 Aethionema arabicum HOM05D006167 ORTHO05D007635 5.7e-10 67.0 59 57.6
arahy.Tifrunner.gnm1.ann1.C36CE0 Arachis hypogaea HOM05D000254 ORTHO05D000165 5.7e-10 67.0 49 63.3
Lsat_1_v5_gn_2_42001 Lactuca sativa HOM05D006167 ORTHO05D007635 5.7e-10 67.0 59 59.3
Rhsim09G0043900 Rhododendron simsii HOM05D006167 ORTHO05D007635 1.7e-09 65.5 54 63.0
Oeu012938.1 Olea europaea HOM05D006167 ORTHO05D007635 2.2e-09 65.1 60 61.7
DCAR_027359 Daucus carota HOM05D006167 ORTHO05D007635 2.8e-09 64.7 60 61.7
Hma1.2p1_0014F.1_g009760 Hydrangea macrophylla HOM05D006167 ORTHO05D007635 2.8e-09 64.7 59 52.5
CAN.G566.4 Capsicum annuum HOM05D006167 ORTHO05D007635 3.7e-09 64.3 62 59.7
Aqoxy5G00097 Aquilegia oxysepala HOM05D006167 ORTHO05D007635 4.8e-09 63.9 53 62.3
Cc03_g06850 Coffea canephora HOM05D006167 ORTHO05D007635 4.8e-09 63.9 62 53.2
SalBow3G0251 Salvia bowleyana HOM05D006167 ORTHO05D007635 6.3e-09 63.5 62 58.1
SalBow3G4531 Salvia bowleyana HOM05D006167 ORTHO05D007635 6.3e-09 63.5 62 58.1
SalBow5G4407 Salvia bowleyana HOM05D006167 ORTHO05D007635 6.3e-09 63.5 62 58.1
SalBow5G4759 Salvia bowleyana HOM05D006167 ORTHO05D007635 6.3e-09 63.5 62 58.1
SalBow5G0916 Salvia bowleyana HOM05D006167 ORTHO05D007635 8.2e-09 63.2 61 57.4
SalBow5G2020 Salvia bowleyana HOM05D006167 ORTHO05D007635 8.2e-09 63.2 61 57.4
Migut.N00323 Erythranthe guttata HOM05D006167 ORTHO05D007635 1.1e-08 62.8 62 56.5
Dinv18834 Davidia involucrata HOM05D006167 ORTHO05D007635 1.4e-08 62.4 58 55.2
Hma1.2p1_0432F.1_g151790 Hydrangea macrophylla HOM05D006167 ORTHO05D007635 1.8e-08 62.0 58 53.4
RcHm_v2.0_Chr4g0396111 Rosa chinensis HOM05D006167 ORTHO05D007635 1.8e-08 62.0 57 49.1
Nitab4.5_0000867g0070 Nicotiana tabacum HOM05D006167 ORTHO05D007635 2.4e-08 61.6 59 54.2
EL10Ac3g06721 Beta vulgaris HOM05D006167 ORTHO05D007635 4.1e-08 60.8 58 55.2
COL.COLO4_16007 Corchorus olitorius HOM05D006167 ORTHO05D007635 5.3e-08 60.5 58 55.2
Solyc12g097040.1 Solanum lycopersicum HOM05D006167 ORTHO05D007635 1.2e-07 59.3 60 55.0
Gohir.D08G110800 Gossypium hirsutum HOM05D006167 ORTHO05D007635 1.5e-07 58.9 61 50.8
Duzib052G0384 Durio zibethinus HOM05D006167 ORTHO05D007635 2.6e-07 58.2 58 53.4
Duzib052G0895 Durio zibethinus HOM05D006167 ORTHO05D007635 2.6e-07 58.2 58 53.4
Duzib266G0005 Durio zibethinus HOM05D006167 ORTHO05D007635 2.6e-07 58.2 58 53.4
Thecc.04G269200 Theobroma cacao HOM05D006167 ORTHO05D007635 2.6e-07 58.2 61 49.2
vmacro15491 Vaccinium macrocarpon HOM05D006167 ORTHO05D007635 2.6e-07 58.2 53 54.7
vmacro22827 Vaccinium macrocarpon HOM05D006167 ORTHO05D007635 2.6e-07 58.2 53 54.7
Peaxi162Scf01007g00005 Petunia axillaris HOM05D006167 ORTHO05D007635 4.5e-07 57.4 66 51.5
unitig_744.g24610 Utricularia gibba HOM05D006167 ORTHO05D007635 4.5e-07 57.4 61 52.5
Gohir.D02G050200 Gossypium hirsutum HOM05D006167 ORTHO05D007635 1.0e-06 56.2 58 50.0
Sc19g0005700 Simmondsia chinensis HOM05D006167 ORTHO05D007635 1.0e-06 56.2 58 53.4
AUR62035353 Chenopodium quinoa HOM05D006167 ORTHO05D007635 1.7e-06 55.5 54 53.7
Gorai.004G118700 Gossypium raimondii HOM05D006167 ORTHO05D007635 1.7e-06 55.5 61 47.5
Gohir.D04G064600 Gossypium hirsutum HOM05D006167 ORTHO05D007635 2.2e-06 55.1 61 47.5
ECA248G1405 Erigeron canadensis HOM05D006167 ORTHO05D007635 2.9e-06 54.7 77 46.8
Gohir.D11G199000 Gossypium hirsutum HOM05D006167 ORTHO05D007635 3.8e-06 54.3 61 49.2
SGA_v2.0_scaffold189G40388 Striga asiatica HOM05D006167 ORTHO05D007635 3.8e-06 54.3 62 50.0
Gohir.D12G087200 Gossypium hirsutum HOM05D006167 ORTHO05D007635 5.0e-06 53.9 58 50.0
Gorai.012G072500 Gossypium raimondii HOM05D006167 ORTHO05D007635 5.0e-06 53.9 58 50.0
SHI00872 Sapria himalayana HOM05D006167 ORTHO05D007635 5.0e-06 53.9 53 45.3
Mapoly0016s0086 Marchantia polymorpha HOM05D006167 ORTHO05D007635 8.5e-06 53.1 52 55.8


User provided reference genes

Program Settings