Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0050518 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 7.6e-261 903.3 453 100.0
CSS0030886 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 1.6e-194 682.9 475 73.7
CSS0038166 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 1.2e-184 650.2 475 71.6
CSS0043583 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 9.9e-176 620.5 467 70.9
CSS0029864 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 2.3e-172 609.4 430 74.9
CSS0008269 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D109135 6.6e-172 607.8 466 69.7
CSS0030923 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 9.6e-171 604.0 467 69.6
CSS0018852 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 3.1e-169 599.0 457 70.5
CSS0045699 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 5.5e-150 535.0 420 68.3
CSS0036762 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 8.3e-74 282.0 347 47.8
CSS0009315 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 1.6e-72 277.7 488 36.7
CSS0004408 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 5.1e-71 272.7 489 36.6
CSS0034277 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 2.1e-61 240.7 467 34.9
CSS0032852 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 4.8e-53 213.0 454 34.6
CSS0030880 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 5.3e-52 209.5 438 34.2
CSS0027262 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 9.9e-51 205.3 479 31.9
CSS0008852 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 9.6e-46 188.7 279 36.6
CSS0012098 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 2.2e-42 177.6 301 35.2
CSS0000781 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 1.6e-40 171.4 304 33.2
CSS0050301 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 2.3e-39 167.5 290 34.8
CSS0009580 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 3.9e-39 166.8 304 32.9
CSS0043631 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 5.8e-35 152.9 267 30.0
CSS0037995 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 1.3e-34 151.8 255 33.7
CSS0018760 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 8.4e-34 149.1 225 33.8
CSS0025792 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D109058 4.6e-32 143.3 442 29.2
CSS0045406 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D111373 3.0e-31 140.6 502 26.1
Rhsim05G0009200 Rhododendron simsii HOM05D007376 ORTHO05D007523 4.3e-30 136.7 284 33.1
CSS0024354 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 2.2e-29 134.4 280 28.9
CSS0010228 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 4.8e-29 133.3 299 28.8
CSS0030799 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 9.0e-28 129.0 257 28.4
CSS0039395 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 9.0e-28 129.0 257 28.4
CSS0043176 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 3.4e-27 127.1 106 56.6
Rhsim04G0195400 Rhododendron simsii HOM05D007376 ORTHO05D007523 4.5e-27 126.7 285 31.6
CSS0020766 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 1.3e-26 125.2 106 57.5
CSS0036780 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 1.3e-26 125.2 106 59.4
CSS0040996 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 2.9e-26 124.0 245 29.0
CSS0030913 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D110203 8.5e-26 122.5 267 28.5
vmacro14386 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 7.2e-25 119.4 227 31.7
CSS0028748 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D110352 1.2e-24 118.6 527 24.9
Rhsim04G0033200 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.2e-24 118.6 232 30.2
RhsimUnG0050500 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.2e-24 118.6 232 30.2
RhsimUnG0145500 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.2e-24 118.6 232 30.2
CSS0009122 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D109114 3.6e-24 117.1 313 32.3
CSS0047960 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 3.6e-24 117.1 249 28.9
CSS0020234 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 4.6e-24 116.7 106 53.8
CSS0007197 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 6.1e-24 116.3 246 30.5
CSS0000071 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 7.9e-24 115.9 246 30.5
RhsimUnG0025400 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.0e-23 115.5 232 29.3
CSS0034164 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D007523 1.4e-23 115.2 227 31.7
CSS0004776 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 1.8e-23 114.8 79 65.8
CSS0026285 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.8e-23 114.8 228 32.0
vmacro19839 Vaccinium macrocarpon HOM05D008484 ORTHO05D007523 1.8e-23 114.8 218 33.0
CSS0038750 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.0e-23 114.0 228 32.0
CSS0040832 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D109556 3.0e-23 114.0 265 27.5
CSS0003731 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 5.1e-23 113.2 228 31.6
CSS0006283 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 5.1e-23 113.2 228 31.6
CSS0006787 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 5.1e-23 113.2 228 31.6
CSS0007760 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 5.1e-23 113.2 228 31.6
CSS0012255 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 5.1e-23 113.2 228 31.6
CSS0018155 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 5.1e-23 113.2 228 31.6
CSS0018878 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 5.1e-23 113.2 228 31.6
CSS0034950 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 5.1e-23 113.2 228 31.6
CSS0035720 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 5.1e-23 113.2 228 31.6
CSS0040322 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 5.1e-23 113.2 228 31.6
CSS0046417 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 5.1e-23 113.2 228 31.6
CSS0047144 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 6.7e-23 112.8 238 30.3
CSS0014159 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 8.8e-23 112.5 228 30.7
CSS0013786 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.1e-22 112.1 227 30.0
CSS0029408 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.1e-22 112.1 228 31.6
CSS0037609 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.1e-22 112.1 228 31.1
CSS0044892 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.0e-22 111.3 246 29.7
CSS0003651 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.5e-22 110.9 206 30.1
RhsimUnG0058200 Rhododendron simsii HOM05D007376 ORTHO05D007523 2.5e-22 110.9 283 27.9
CSS0022638 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 4.3e-22 110.2 225 30.2
CSS0048122 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 4.3e-22 110.2 246 30.1
CSS0023104 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 5.7e-22 109.8 228 31.1
Rhsim03G0108200 Rhododendron simsii HOM05D008484 ORTHO05D007523 7.4e-22 109.4 257 30.7
CSS0011758 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 9.7e-22 109.0 246 29.3
CSS0006218 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.7e-21 108.2 228 31.1
CSS0029919 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.7e-21 108.2 228 31.1
CSS0046859 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.7e-21 107.1 218 31.7
CSS0049789 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 6.3e-21 106.3 242 29.3
CSS0002114 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.8e-20 104.8 229 30.1
CSS0000729 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D111114 5.3e-20 103.2 185 32.4
CSS0032655 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D112617 5.3e-20 103.2 529 23.6
CSS0044012 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D108943 1.2e-19 102.1 157 31.8
CSS0045057 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 2.6e-19 100.9 106 51.9
CSS0048388 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D007523 5.9e-19 99.8 79 54.4
Dinv02273 Davidia involucrata HOM05D008484 ORTHO05D007523 3.8e-18 97.1 244 29.9
CSS0010049 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 5.0e-18 96.7 243 27.6
Rhsim08G0213000 Rhododendron simsii HOM05D007376 ORTHO05D001590 8.5e-18 95.9 207 32.4
RhsimUnG0232600 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.1e-17 95.5 207 31.9
CSS0004314 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D110380 1.4e-17 95.1 395 23.5
CSS0016630 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D110836 2.5e-17 94.4 103 46.6
RhsimUnG0042600 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.5e-17 93.2 278 25.5
CSS0007091 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D109861 7.2e-17 92.8 146 30.8
CSS0028075 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D112595 1.2e-16 92.0 276 25.7
Rhsim12G0049900 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.3e-15 87.8 288 24.3
Rhsim13G0177800 Rhododendron simsii HOM05D008484 ORTHO05D007523 8.8e-15 85.9 225 26.7
Dinv07248 Davidia involucrata HOM05D008484 ORTHO05D007523 9.7e-14 82.4 166 28.9
CSS0024257 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 3.7e-13 80.5 204 26.5
CSS0005845 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 6.3e-13 79.7 133 32.3
CSS0013773 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 6.3e-13 79.7 133 32.3
CSS0026649 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 6.3e-13 79.7 133 32.3
Rhsim05G0055800 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.1e-12 79.0 150 30.0
Rhsim06G0208800 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.1e-12 79.0 150 30.0
CSS0050368 Camellia sinensis var. sinensis HOM05D010347 ORTHO05D112446 1.4e-12 78.6 263 27.0
Dinv07454 Davidia involucrata HOM05D008484 ORTHO05D007523 4.1e-12 77.0 141 31.2
vmacro05225 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 4.1e-12 77.0 174 28.2
vmacro09690 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 2.0e-11 74.7 137 33.6
Rhsim01G0158000 Rhododendron simsii HOM05D017361 ORTHO05D007523 2.6e-11 74.3 116 32.8
CSS0001042 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 4.5e-11 73.6 181 29.8
CSS0022103 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 3.8e-10 70.5 240 24.2
Rhsim01G0036600 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.8e-10 70.5 176 24.4
Rhsim06G0054100 Rhododendron simsii HOM05D017774 ORTHO05D013099 5.0e-10 70.1 131 29.0
TWI14G1239 Tripterygium wilfordii HOM05D008484 ORTHO05D007523 3.2e-09 67.4 251 22.3
TWI23G0081 Tripterygium wilfordii HOM05D008484 ORTHO05D007523 3.2e-09 67.4 251 22.3
vmacro23477 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 2.7e-08 64.3 96 34.4
CSS0020586 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.0e-07 62.4 231 24.7
vmacro01212 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.4e-07 62.0 131 33.6
RcHm_v2.0_Chr6g0266151 Rosa chinensis HOM05D012588 ORTHO05D001590 1.8e-07 61.6 257 21.0
CSS0048517 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 3.9e-07 60.5 131 39.7
RcHm_v2.0_Chr6g0266141 Rosa chinensis HOM05D012588 ORTHO05D001590 5.2e-07 60.1 151 25.8
FvH4_2g10140 Fragaria vesca HOM05D012588 ORTHO05D001590 2.6e-06 57.8 255 23.5
CSS0022760 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 3.3e-06 57.4 227 22.0
FAN15G1451 Fragaria x ananassa HOM05D012588 ORTHO05D001590 9.7e-06 55.8 257 21.4
Rhsim05G0021100 Rhododendron simsii HOM05D007376 ORTHO05D001590 9.7e-06 55.8 124 27.4
TWI38G0209 Tripterygium wilfordii HOM05D008484 ORTHO05D007523 9.7e-06 55.8 124 28.2


User provided reference genes

Program Settings