Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0050494 Camellia sinensis var. sinensis HOM05D000729 ORTHO05D001063 1.0e-25 119.4 64 100.0
FAN24G1010 Fragaria x ananassa HOM05D000729 ORTHO05D001063 1.7e-12 75.5 47 89.4
arahy.Tifrunner.gnm1.ann1.084TER Arachis hypogaea HOM05D000729 ORTHO05D001063 1.1e-11 72.8 47 87.2
arahy.Tifrunner.gnm1.ann1.8IFR8Y Arachis hypogaea HOM05D000729 ORTHO05D001063 1.1e-11 72.8 47 87.2
arahy.Tifrunner.gnm1.ann1.FU0XIN Arachis hypogaea HOM05D000729 ORTHO05D001063 1.1e-11 72.8 47 87.2
arahy.Tifrunner.gnm1.ann1.HJG1UD Arachis hypogaea HOM05D000729 ORTHO05D001063 1.1e-11 72.8 47 87.2
arahy.Tifrunner.gnm1.ann1.KE24QQ Arachis hypogaea HOM05D000729 ORTHO05D001063 1.6e-10 68.9 47 83.0
arahy.Tifrunner.gnm1.ann1.R4S00L Arachis hypogaea HOM05D000729 ORTHO05D001063 3.5e-10 67.8 46 80.4
vmacro22398 Vaccinium macrocarpon HOM05D000729 ORTHO05D001063 1.3e-09 65.9 41 80.5
vmacro22423 Vaccinium macrocarpon HOM05D000729 ORTHO05D001063 1.3e-09 65.9 41 80.5
arahy.Tifrunner.gnm1.ann1.NIYG2M Arachis hypogaea HOM05D000729 ORTHO05D001063 3.0e-09 64.7 44 77.3
CSS0022079 Camellia sinensis var. sinensis HOM05D000729 ORTHO05D001063 3.9e-09 64.3 39 84.6
CSS0038723 Camellia sinensis var. sinensis HOM05D000729 ORTHO05D001063 3.9e-09 64.3 39 84.6
C06p21330 Brassica napus HOM05D000729 ORTHO05D001063 6.6e-09 63.5 38 86.8
C06p23140 Brassica napus HOM05D000729 ORTHO05D001063 6.6e-09 63.5 38 86.8
C09p24730 Brassica napus HOM05D000729 ORTHO05D001063 6.6e-09 63.5 38 86.8
BolSC29t60517H Brassica oleracea HOM05D000729 ORTHO05D001063 6.6e-09 63.5 38 86.8
BolSC35t60680H Brassica oleracea HOM05D000729 ORTHO05D001063 6.6e-09 63.5 38 86.8
BolSC45t60895H Brassica oleracea HOM05D000729 ORTHO05D001063 6.6e-09 63.5 38 86.8
BolSC49t61130H Brassica oleracea HOM05D000729 ORTHO05D001063 6.6e-09 63.5 38 86.8
BolSC49t61215H Brassica oleracea HOM05D000729 ORTHO05D001063 6.6e-09 63.5 38 86.8
BraSC138t45543Z Brassica rapa HOM05D000729 ORTHO05D001063 6.6e-09 63.5 38 86.8
HanXRQChr00c0533g0575531 Helianthus annuus HOM05D000729 ORTHO05D001063 8.6e-09 63.2 44 72.7
arahy.Tifrunner.gnm1.ann1.0BYT70 Arachis hypogaea HOM05D000729 ORTHO05D001063 1.5e-08 62.4 57 66.7
Sed0008128 Sechium edule HOM05D000729 ORTHO05D001063 1.5e-08 62.4 40 80.0
arahy.Tifrunner.gnm1.ann1.A85ADF Arachis hypogaea HOM05D000729 ORTHO05D001063 1.9e-08 62.0 44 75.0
arahy.Tifrunner.gnm1.ann1.NGJ0AN Arachis hypogaea HOM05D000729 ORTHO05D001063 1.9e-08 62.0 44 75.0
arahy.Tifrunner.gnm1.ann1.S6TNUT Arachis hypogaea HOM05D000729 ORTHO05D001063 1.9e-08 62.0 44 75.0
Medtr3g035660 Medicago truncatula HOM05D000729 ORTHO05D001063 1.9e-08 62.0 40 82.5
Nitab4.5_0001305g0050 Nicotiana tabacum HOM05D000890 ORTHO05D000697 1.9e-08 62.0 42 78.6
SabraPtG0004800 Salix brachista HOM05D000729 ORTHO05D001063 1.9e-08 62.0 39 82.1
HanXRQChr00c0454g0574901 Helianthus annuus HOM05D000729 ORTHO05D001063 2.5e-08 61.6 40 77.5
EL10As15g24113 Beta vulgaris HOM05D000729 ORTHO05D001063 3.3e-08 61.2 40 80.0
LjContig00319g0001918 Lotus japonicus HOM05D000729 ORTHO05D001063 3.3e-08 61.2 41 78.0
Nitab4.5_0007738g0070 Nicotiana tabacum HOM05D000729 ORTHO05D001063 3.3e-08 61.2 38 84.2
Nitab4.5_0012558g0030 Nicotiana tabacum HOM05D000729 ORTHO05D001063 4.3e-08 60.8 39 79.5
Nitab4.5_0027450g0010 Nicotiana tabacum HOM05D000729 ORTHO05D001063 4.3e-08 60.8 38 81.6
HanXRQChr00c0264g0572891 Helianthus annuus HOM05D000729 ORTHO05D001063 5.6e-08 60.5 42 76.2
HanXRQChr00c0386g0574421 Helianthus annuus HOM05D000729 ORTHO05D001063 5.6e-08 60.5 42 76.2
HanXRQChr00c0434g0574661 Helianthus annuus HOM05D000729 ORTHO05D001063 5.6e-08 60.5 42 76.2
HanXRQChr01g0020151 Helianthus annuus HOM05D000729 ORTHO05D001063 5.6e-08 60.5 42 76.2
HanXRQChr02g0059631 Helianthus annuus HOM05D000729 ORTHO05D001063 5.6e-08 60.5 42 76.2
HanXRQChr05g0152351 Helianthus annuus HOM05D000729 ORTHO05D001063 5.6e-08 60.5 42 76.2
HanXRQChr05g0152491 Helianthus annuus HOM05D000729 ORTHO05D001063 5.6e-08 60.5 42 76.2
HanXRQChr10g0284481 Helianthus annuus HOM05D000729 ORTHO05D001063 5.6e-08 60.5 42 76.2
HanXRQChr11g0321181 Helianthus annuus HOM05D000729 ORTHO05D001063 5.6e-08 60.5 42 76.2
HanXRQChr11g0327111 Helianthus annuus HOM05D000729 ORTHO05D001063 5.6e-08 60.5 42 76.2
HanXRQChr11g0333791 Helianthus annuus HOM05D000729 ORTHO05D001063 5.6e-08 60.5 42 76.2
HanXRQChr12g0369921 Helianthus annuus HOM05D000729 ORTHO05D001063 5.6e-08 60.5 42 76.2
HanXRQChr13g0418941 Helianthus annuus HOM05D000729 ORTHO05D001063 5.6e-08 60.5 42 76.2
HanXRQChr17g0569661 Helianthus annuus HOM05D000729 ORTHO05D001063 5.6e-08 60.5 42 76.2
HanXRQCPg0580271 Helianthus annuus HOM05D000729 ORTHO05D001063 5.6e-08 60.5 42 76.2
HanXRQCPg0580451 Helianthus annuus HOM05D000729 ORTHO05D001063 5.6e-08 60.5 42 76.2
Nitab4.5_0014666g0030 Nicotiana tabacum HOM05D000729 ORTHO05D001063 5.6e-08 60.5 39 82.1
VMungo0643G0001 Vigna mungo HOM05D000729 ORTHO05D001063 5.6e-08 60.5 37 86.5
Solyc11g021100.2 Solanum lycopersicum HOM05D000729 ORTHO05D001063 7.3e-08 60.1 38 81.6
EL10Ac4g08618 Beta vulgaris HOM05D000729 ORTHO05D001063 9.5e-08 59.7 38 81.6
BraSC59t46525Z Brassica rapa HOM05D000729 ORTHO05D001063 9.5e-08 59.7 36 86.1
HanXRQChr00c0349g0574001 Helianthus annuus HOM05D000729 ORTHO05D001063 1.2e-07 59.3 42 78.6
HanXRQChr00c0585g0576201 Helianthus annuus HOM05D000729 ORTHO05D001063 1.2e-07 59.3 42 78.6
HanXRQChr07g0194901 Helianthus annuus HOM05D000729 ORTHO05D001063 1.2e-07 59.3 42 78.6
Lalb_Chr12g0206651 Lupinus albus HOM05D000729 ORTHO05D001063 1.2e-07 59.3 38 84.2
Nitab4.5_0007104g0090 Nicotiana tabacum HOM05D000729 ORTHO05D001063 1.2e-07 59.3 38 78.9
Medtr0002s0310 Medicago truncatula HOM05D000729 ORTHO05D001063 2.8e-07 58.2 44 70.5
Lsat_1_v5_gn_3_112740 Lactuca sativa HOM05D000729 ORTHO05D001063 3.6e-07 57.8 38 78.9
Lsat_1_v5_gn_3_92301 Lactuca sativa HOM05D000729 ORTHO05D001063 3.6e-07 57.8 38 78.9
Lsat_1_v5_gn_4_11820 Lactuca sativa HOM05D000729 ORTHO05D001063 3.6e-07 57.8 38 78.9
Lsat_1_v5_gn_9_18660 Lactuca sativa HOM05D000729 ORTHO05D001063 3.6e-07 57.8 38 78.9
Oeu015132.1 Olea europaea HOM05D000729 ORTHO05D001063 4.7e-07 57.4 40 72.5
BolSC35t60718H Brassica oleracea HOM05D000729 ORTHO05D001063 8.1e-07 56.6 33 87.9
HanXRQChr17g0567651 Helianthus annuus HOM05D000729 ORTHO05D001063 8.1e-07 56.6 42 73.8
Lsat_1_v5_gn_6_37880 Lactuca sativa HOM05D000729 ORTHO05D001063 1.4e-06 55.8 41 75.6
EL10Ac5g11886 Beta vulgaris HOM05D000729 ORTHO05D001063 2.3e-06 55.1 34 85.3
Sed0001647 Sechium edule HOM05D000729 ORTHO05D001063 2.3e-06 55.1 34 85.3
Sed0019191 Sechium edule HOM05D000729 ORTHO05D001063 8.9e-06 53.1 35 77.1


User provided reference genes

Program Settings