Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0050457 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 2.4e-81 305.4 156 100.0
CSS0007014 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 1.5e-78 296.2 156 97.4
CSS0039992 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 1.5e-78 296.2 156 97.4
Rhsim09G0195800 Rhododendron simsii HOM05D007050 ORTHO05D008849 2.7e-64 248.8 156 84.6
vmacro09864 Vaccinium macrocarpon HOM05D007050 ORTHO05D008849 2.5e-62 242.3 155 81.9
Dinv01994 Davidia involucrata HOM05D007050 ORTHO05D008849 2.1e-61 239.2 156 80.1
Dinv21998 Davidia involucrata HOM05D007050 ORTHO05D008849 2.8e-61 238.8 156 80.1
Dinv30101 Davidia involucrata HOM05D007050 ORTHO05D008849 2.8e-61 238.8 156 80.1
GSVIVG01010640001 Vitis vinifera HOM05D007050 ORTHO05D008849 8.1e-61 237.3 156 77.6
CiPaw.04G068600 Carya illinoinensis HOM05D007050 ORTHO05D008849 1.2e-59 233.4 156 78.8
RcHm_v2.0_Chr6g0256951 Rosa chinensis HOM05D007050 ORTHO05D008849 3.8e-58 228.4 156 76.3
Prupe.8G123300 Prunus persica HOM05D007050 ORTHO05D008849 6.4e-58 227.6 156 75.6
DCAR_020794 Daucus carota HOM05D007050 ORTHO05D008849 7.1e-57 224.2 156 73.7
MD05G1079400 Malus domestica HOM05D007050 ORTHO05D008849 9.3e-57 223.8 156 76.3
Lj2P125T52 Lonicera japonica HOM05D007050 ORTHO05D008849 1.6e-56 223.0 157 73.9
Haze_13774 Corylus avellana HOM05D007050 ORTHO05D008849 2.7e-56 222.2 156 74.4
TAR375G0109 Trochodendron aralioides HOM05D007050 ORTHO05D008849 3.5e-56 221.9 156 74.4
CANSAT25G0493 Cannabis sativa HOM05D007050 ORTHO05D008849 4.6e-56 221.5 156 73.1
Duzib084G1442 Durio zibethinus HOM05D007050 ORTHO05D008849 6.0e-56 221.1 152 75.7
Nitab4.5_0005171g0060 Nicotiana tabacum HOM05D007050 ORTHO05D008849 1.0e-55 220.3 157 75.2
Nitab4.5_0007465g0080 Nicotiana tabacum HOM05D007050 ORTHO05D008849 1.0e-55 220.3 157 74.5
ClCG01G005370 Citrullus lanatus HOM05D007050 ORTHO05D008849 2.3e-55 219.2 156 75.0
FvH4_2g06230 Fragaria vesca HOM05D007050 ORTHO05D008849 5.1e-55 218.0 156 74.4
FAN15G0493 Fragaria x ananassa HOM05D007050 ORTHO05D008849 5.1e-55 218.0 154 74.7
PGSC0003DMG400028475 Solanum tuberosum HOM05D007050 ORTHO05D008849 6.7e-55 217.6 157 73.9
Potri.012G134700 Populus trichocarpa HOM05D007050 ORTHO05D008849 1.1e-54 216.9 156 73.1
PGR031G0901 Punica granatum HOM05D007050 ORTHO05D008849 1.1e-54 216.9 160 71.9
Lj1P158T25 Lonicera japonica HOM05D007050 ORTHO05D008849 3.3e-54 215.3 156 73.7
Sopen02g021430 Solanum pennellii HOM05D007050 ORTHO05D008849 3.3e-54 215.3 157 73.9
Sc19g0001730 Simmondsia chinensis HOM05D007050 ORTHO05D008849 5.6e-54 214.5 156 72.4
COL.COLO4_14249 Corchorus olitorius HOM05D007050 ORTHO05D008849 9.6e-54 213.8 152 73.0
Ca_14876_v3 Cicer arietinum L. HOM05D007050 ORTHO05D008849 1.6e-53 213.0 156 74.4
Migut.F01153 Erythranthe guttata HOM05D007050 ORTHO05D008849 1.6e-53 213.0 156 69.2
Phvul.006G062300 Phaseolus vulgaris HOM05D007050 ORTHO05D008849 1.6e-53 213.0 156 75.6
Lalb_Chr18g0050481 Lupinus albus HOM05D007050 ORTHO05D008849 2.1e-53 212.6 156 73.7
Sed0026780 Sechium edule HOM05D007050 ORTHO05D008849 2.8e-53 212.2 156 71.8
SGA_v2.0_scaffold10G05396 Striga asiatica HOM05D007050 ORTHO05D008849 2.8e-53 212.2 156 67.9
Thecc.03G169300 Theobroma cacao HOM05D007050 ORTHO05D008849 3.7e-53 211.8 150 74.7
CsaV3_5G005620 Cucumis sativus L. HOM05D007050 ORTHO05D008849 4.8e-53 211.5 157 73.2
Sabra12G0101300 Salix brachista HOM05D007050 ORTHO05D008849 6.2e-53 211.1 156 71.2
TWI14G0742 Tripterygium wilfordii HOM05D007050 ORTHO05D008849 6.2e-53 211.1 156 72.4
Ciclev10006100m.g Citrus clementina HOM05D007050 ORTHO05D008849 1.1e-52 210.3 157 72.6
Hund18113 Selenicereus undatus HOM05D007050 ORTHO05D008849 1.4e-52 209.9 156 71.2
Lj6g0001476 Lotus japonicus HOM05D007050 ORTHO05D008849 1.8e-52 209.5 156 75.0
Glyma.18G070900 Glycine max HOM05D007050 ORTHO05D008849 2.4e-52 209.1 156 75.0
Aqoxy7G00473 Aquilegia oxysepala HOM05D007050 ORTHO05D008849 3.1e-52 208.8 156 67.9
Peaxi162Scf00302g00002 Petunia axillaris HOM05D007050 ORTHO05D008849 3.1e-52 208.8 144 76.4
Gohir.A12G261300 Gossypium hirsutum HOM05D007050 ORTHO05D008849 4.0e-52 208.4 143 76.2
CAN.G411.83 Capsicum annuum HOM05D007050 ORTHO05D008849 6.9e-52 207.6 158 70.9
Gorai.008G281000 Gossypium raimondii HOM05D007050 ORTHO05D008849 6.9e-52 207.6 143 76.2
PSO832G4279 Papaver somniferum HOM05D007050 ORTHO05D008849 1.2e-51 206.8 156 69.2
Sed0027301 Sechium edule HOM05D007050 ORTHO05D008849 1.5e-51 206.5 156 69.9
Cc02_g03480 Coffea canephora HOM05D007050 ORTHO05D008849 2.0e-51 206.1 156 73.1
VMungo0540G0839 Vigna mungo HOM05D007050 ORTHO05D008849 2.6e-51 205.7 156 72.4
AUR62016042 Chenopodium quinoa HOM05D007050 ORTHO05D008849 5.8e-51 204.5 156 70.5
Psat5g164520 Pisum sativum HOM05D007050 ORTHO05D008849 5.8e-51 204.5 156 73.1
TPR.G14735 Trifolium pratense HOM05D007050 ORTHO05D008849 7.6e-51 204.1 156 71.8
Nitab4.5_0002395g0040 Nicotiana tabacum HOM05D007050 ORTHO05D008849 1.7e-50 203.0 162 71.0
Medtr3g061530 Medicago truncatula HOM05D007050 ORTHO05D008849 4.9e-50 201.4 156 71.8
MBI04_g03341_MAGBIO Magnolia biondii HOM05D007050 ORTHO05D008849 6.4e-50 201.1 156 67.9
ATR0712G080 Amborella trichopoda HOM05D007050 ORTHO05D008849 3.2e-49 198.7 127 79.5
arahy.Tifrunner.gnm1.ann1.78X7SL Arachis hypogaea HOM05D007050 ORTHO05D008849 3.2e-49 198.7 156 71.8
arahy.Tifrunner.gnm1.ann1.PW8R36 Arachis hypogaea HOM05D007050 ORTHO05D008849 4.2e-49 198.4 128 82.0
ECA248G3280 Erigeron canadensis HOM05D007050 ORTHO05D008849 4.2e-49 198.4 158 72.2
Os04g0488600 Oryza sativa ssp. japonica HOM05D007050 ORTHO05D008849 4.2e-49 198.4 156 69.2
THA.LOC104820496 Tarenaya hassleriana HOM05D007050 ORTHO05D008849 7.1e-49 197.6 161 67.1
Hma1.2p1_0270F.1_g108570 Hydrangea macrophylla HOM05D007050 ORTHO05D008849 1.2e-48 196.8 121 84.3
Nitab4.5_0002684g0010 Nicotiana tabacum HOM05D007050 ORTHO05D008849 1.2e-48 196.8 140 74.3
Zm00001eb078970 Zea mays HOM05D007050 ORTHO05D008849 1.6e-48 196.4 148 71.6
unitig_0.g465 Utricularia gibba HOM05D007050 ORTHO05D008849 7.9e-48 194.1 156 66.0
Lsat_1_v5_gn_1_51040 Lactuca sativa HOM05D007050 ORTHO05D008849 1.0e-47 193.7 150 70.7
Thhalv10003284m.g Eutrema salsugineum HOM05D007050 ORTHO05D008849 1.8e-47 193.0 156 68.6
Nitab4.5_0007465g0070 Nicotiana tabacum HOM05D007050 ORTHO05D008849 2.3e-47 192.6 163 67.5
SEGI_25801 Sequoiadendron giganteum HOM05D007050 ORTHO05D008849 8.7e-47 190.7 123 77.2
Aa31LG9G13150 Aethionema arabicum HOM05D007050 ORTHO05D008849 3.3e-46 188.7 118 80.5
HanXRQChr11g0350791 Helianthus annuus HOM05D007050 ORTHO05D008849 3.3e-46 188.7 124 81.5
Sp2g07800 Schrenkiella parvula HOM05D007050 ORTHO05D008849 3.3e-46 188.7 162 64.8
Actinidia32907 Actinidia chinensis HOM05D007050 ORTHO05D008849 5.6e-46 188.0 127 78.0
CARHR186790 Cardamine hirsuta HOM05D007050 ORTHO05D008849 5.6e-46 188.0 158 69.6
CDE03G0478 Ceratophyllum demersum HOM05D007050 ORTHO05D008849 1.3e-45 186.8 115 81.7
Carub.0008s0571 Capsella rubella HOM05D007050 ORTHO05D008849 3.7e-45 185.3 164 64.6
Atru.BG.173.p Acer truncatum HOM05D007050 ORTHO05D008849 4.8e-45 184.9 115 84.3
AT5G43050 Arabidopsis thaliana HOM05D007050 ORTHO05D008849 4.8e-45 184.9 165 64.2
C09p25560 Brassica napus HOM05D007050 ORTHO05D008849 1.1e-44 183.7 157 65.6
BolC9t55456H Brassica oleracea HOM05D007050 ORTHO05D008849 1.1e-44 183.7 157 65.6
BraA09t37628Z Brassica rapa HOM05D007050 ORTHO05D008849 1.1e-44 183.7 157 66.2
BcaB07g31026 Brassica carinata HOM05D007050 ORTHO05D008849 3.1e-44 182.2 160 64.4
A09p20160 Brassica napus HOM05D007050 ORTHO05D008849 3.1e-44 182.2 157 65.6
BcaC04g21951 Brassica carinata HOM05D007050 ORTHO05D008849 4.0e-44 181.8 157 65.6
AL8G17700 Arabidopsis lyrata HOM05D007050 ORTHO05D008849 5.3e-44 181.4 118 79.7
CiPaw.03G101700 Carya illinoinensis HOM05D007050 ORTHO05D008849 1.3e-42 176.8 130 72.3
Cfa008270 Carpinus fangiana HOM05D007050 ORTHO05D008849 6.5e-42 174.5 127 71.7
Eucgr.A02837 Eucalyptus grandis HOM05D007050 ORTHO05D008849 1.2e-40 170.2 156 59.0
Manes.06G142700 Manihot esculenta HOM05D007050 ORTHO05D008849 2.3e-39 166.0 127 67.7
Atru.chr1.541 Acer truncatum HOM05D007050 ORTHO05D008849 8.7e-39 164.1 143 63.6
Mapoly0142s0029 Marchantia polymorpha HOM05D007050 ORTHO05D008849 2.5e-38 162.5 116 72.4
MELO3C005391.2 Cucumis melo HOM05D007050 ORTHO05D008849 1.3e-37 160.2 128 68.8
EL10Ac3g05676 Beta vulgaris HOM05D007050 ORTHO05D008849 1.6e-37 159.8 129 65.9
EL10Ac3g05723 Beta vulgaris HOM05D007050 ORTHO05D008849 1.1e-36 157.1 128 64.8
Nn6g34283 Nelumbo nucifera HOM05D007050 ORTHO05D008849 1.1e-36 157.1 127 65.4
Gohir.D12G262200 Gossypium hirsutum HOM05D007050 ORTHO05D008849 6.9e-36 154.5 115 70.4
AagrBONN_evm.TU.Sc2ySwM_344.2682 Anthoceros agrestis HOM05D007050 ORTHO05D008849 4.5e-35 151.8 104 75.0
Pp3c18_12660 Physcomitrium patens HOM05D007050 ORTHO05D008849 7.7e-35 151.0 140 60.0
AUR62021248 Chenopodium quinoa HOM05D007050 ORTHO05D008849 1.7e-34 149.8 128 63.3
Ah.13g067900 Amaranthus hybridus HOM05D007050 ORTHO05D008849 3.8e-34 148.7 137 58.4
SMO352G0024 Selaginella moellendorffii HOM05D007050 ORTHO05D008849 2.5e-33 146.0 104 69.2
Hma1.2p1_0270F.1_g108560 Hydrangea macrophylla HOM05D007050 ORTHO05D008849 7.2e-33 144.4 141 56.7
CDE04G2008 Ceratophyllum demersum HOM05D007050 ORTHO05D008849 1.7e-29 133.3 91 73.6
CsaV3_5G027180 Cucumis sativus L. HOM05D007050 ORTHO05D008849 3.3e-14 82.4 83 61.4
AagrBONN_evm.TU.Sc2ySwM_362.597 Anthoceros agrestis HOM05D007050 ORTHO05D008849 2.0e-11 73.2 68 55.9
MCO11G758 Micromonas commoda HOM05D007050 ORTHO05D008849 2.5e-09 66.2 108 37.0


User provided reference genes

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