Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0050432 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 1.1e-127 459.9 232 100.0
CSS0030024 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 2.1e-73 279.6 155 95.5
Rhsim05G0231700 Rhododendron simsii HOM05D006410 ORTHO05D007914 1.1e-66 257.3 177 76.8
Dinv16966 Davidia involucrata HOM05D006410 ORTHO05D007914 3.6e-65 252.3 169 77.5
TAR633G1493 Trochodendron aralioides HOM05D006410 ORTHO05D007914 1.2e-63 247.3 166 77.7
GSVIVG01030169001 Vitis vinifera HOM05D006410 ORTHO05D007914 2.0e-63 246.5 192 69.3
Atru.chr8.91 Acer truncatum HOM05D006410 ORTHO05D007914 1.1e-61 240.7 169 75.7
Actinidia20795 Actinidia chinensis HOM05D006410 ORTHO05D007914 3.9e-59 232.3 166 74.7
QL07p031892 Quercus lobata HOM05D006410 ORTHO05D007914 6.6e-59 231.5 191 65.4
Ciclev10012138m.g Citrus clementina HOM05D006410 ORTHO05D007914 8.7e-59 231.1 192 66.7
Thecc.04G150000 Theobroma cacao HOM05D006410 ORTHO05D007914 6.2e-57 224.9 192 64.6
Hma1.2p1_0537F.1_g174300 Hydrangea macrophylla HOM05D006410 ORTHO05D007914 8.1e-57 224.6 169 69.8
Cfa013491 Carpinus fangiana HOM05D006410 ORTHO05D007914 5.8e-55 218.4 169 70.4
Potri.006G109500 Populus trichocarpa HOM05D006410 ORTHO05D007914 5.8e-55 218.4 192 64.6
Sabra06G0085200 Salix brachista HOM05D006410 ORTHO05D007914 9.9e-55 217.6 192 65.1
Manes.09G123200 Manihot esculenta HOM05D006410 ORTHO05D007914 6.4e-54 214.9 193 63.7
PGR004G0643 Punica granatum HOM05D006410 ORTHO05D007914 6.4e-54 214.9 166 68.7
Haze_22079 Corylus avellana HOM05D006410 ORTHO05D007914 1.1e-53 214.2 239 55.2
ECA247G0827 Erigeron canadensis HOM05D006410 ORTHO05D007914 9.3e-53 211.1 169 68.6
CiPaw.10G165500 Carya illinoinensis HOM05D006410 ORTHO05D007914 1.6e-52 210.3 192 60.4
Prupe.6G295400 Prunus persica HOM05D006410 ORTHO05D007914 1.6e-52 210.3 169 68.0
Lsat_1_v5_gn_9_39501 Lactuca sativa HOM05D006410 ORTHO05D007914 3.5e-52 209.1 169 68.6
CAN.G1018.3 Capsicum annuum HOM05D006410 ORTHO05D007914 6.0e-52 208.4 166 65.1
COL.COLO4_03931 Corchorus olitorius HOM05D006410 ORTHO05D007914 6.0e-52 208.4 192 62.0
TWI77G0542 Tripterygium wilfordii HOM05D006410 ORTHO05D007914 7.8e-52 208.0 175 68.6
Nitab4.5_0000381g0170 Nicotiana tabacum HOM05D006410 ORTHO05D007914 3.9e-51 205.7 166 66.3
Duzib212G0115 Durio zibethinus HOM05D006410 ORTHO05D007914 1.1e-50 204.1 192 62.5
Solyc10g085690.2 Solanum lycopersicum HOM05D006410 ORTHO05D007914 1.1e-50 204.1 166 63.3
Eucgr.H04867 Eucalyptus grandis HOM05D006410 ORTHO05D007914 2.5e-50 203.0 166 66.3
vmacro20378 Vaccinium macrocarpon HOM05D006410 ORTHO05D007914 2.5e-50 203.0 141 76.6
Eucgr.G01626 Eucalyptus grandis HOM05D006410 ORTHO05D007914 3.3e-50 202.6 166 66.3
Peaxi162Scf00146g01120 Petunia axillaris HOM05D006410 ORTHO05D007914 3.3e-50 202.6 166 63.9
RcHm_v2.0_Chr3g0460291 Rosa chinensis HOM05D006410 ORTHO05D007914 3.3e-50 202.6 168 67.9
Eucgr.A00566 Eucalyptus grandis HOM05D006410 ORTHO05D007914 4.3e-50 202.2 166 66.3
Eucgr.J00376 Eucalyptus grandis HOM05D006410 ORTHO05D007914 5.6e-50 201.8 166 65.7
Eucgr.K01292 Eucalyptus grandis HOM05D006410 ORTHO05D007914 5.6e-50 201.8 166 66.3
FAN02G1808 Fragaria x ananassa HOM05D006410 ORTHO05D007914 7.3e-50 201.4 168 67.3
FAN09G0831 Fragaria x ananassa HOM05D006410 ORTHO05D007914 9.6e-50 201.1 168 67.3
MD12G1190300 Malus domestica HOM05D006410 ORTHO05D007914 2.1e-49 199.9 172 66.3
Eucgr.G00130 Eucalyptus grandis HOM05D006410 ORTHO05D007914 3.6e-49 199.1 166 65.7
FAN05G4204 Fragaria x ananassa HOM05D006410 ORTHO05D007914 3.6e-49 199.1 168 66.7
Sopen10g035110 Solanum pennellii HOM05D006410 ORTHO05D007914 6.2e-49 198.4 166 61.4
CsaV3_4G027230 Cucumis sativus L. HOM05D006410 ORTHO05D007914 8.1e-49 198.0 192 56.2
ClCG04G006320 Citrullus lanatus HOM05D006410 ORTHO05D007914 1.1e-48 197.6 192 57.8
FvH4_6g09660 Fragaria vesca HOM05D006410 ORTHO05D007914 1.4e-48 197.2 168 66.1
FAN14G0316 Fragaria x ananassa HOM05D006410 ORTHO05D007914 1.4e-48 197.2 168 66.1
Nitab4.5_0009611g0010 Nicotiana tabacum HOM05D006410 ORTHO05D007914 2.4e-48 196.4 241 51.0
MD04G1175900 Malus domestica HOM05D006410 ORTHO05D007914 3.1e-48 196.1 169 63.3
HanXRQChr15g0464751 Helianthus annuus HOM05D006410 ORTHO05D007914 4.0e-48 195.7 169 63.3
PSO339G1476 Papaver somniferum HOM05D006410 ORTHO05D007914 5.3e-48 195.3 166 61.4
Gohir.D02G003000 Gossypium hirsutum HOM05D006410 ORTHO05D007914 9.0e-48 194.5 192 59.9
Gorai.005G003500 Gossypium raimondii HOM05D006410 ORTHO05D007914 1.5e-47 193.7 192 59.4
Nn2g10260 Nelumbo nucifera HOM05D006410 ORTHO05D007914 1.5e-47 193.7 166 65.1
arahy.Tifrunner.gnm1.ann1.LV5WBC Arachis hypogaea HOM05D006410 ORTHO05D007914 4.5e-47 192.2 192 57.8
Lj1g0017463 Lotus japonicus HOM05D006410 ORTHO05D007914 4.5e-47 192.2 192 57.3
arahy.Tifrunner.gnm1.ann1.K0FU58 Arachis hypogaea HOM05D006410 ORTHO05D007914 7.6e-47 191.4 192 57.3
Gohir.A02G002700 Gossypium hirsutum HOM05D006410 ORTHO05D007914 9.9e-47 191.0 192 58.9
Psat3g118640 Pisum sativum HOM05D006410 ORTHO05D007914 1.3e-46 190.7 170 61.2
TPR.G24331 Trifolium pratense HOM05D006410 ORTHO05D007914 1.3e-46 190.7 170 61.2
PSO384G4459 Papaver somniferum HOM05D006410 ORTHO05D007914 2.2e-46 189.9 166 59.6
Glyma.18G212900 Glycine max HOM05D006410 ORTHO05D007914 4.9e-46 188.7 192 57.8
Lalb_Chr03g0043841 Lupinus albus HOM05D006410 ORTHO05D007914 4.9e-46 188.7 192 56.2
Medtr7g073510 Medicago truncatula HOM05D006410 ORTHO05D007914 4.9e-46 188.7 170 61.8
CDE04G0338 Ceratophyllum demersum HOM05D006410 ORTHO05D007914 1.4e-45 187.2 237 48.1
Cc06_g00300 Coffea canephora HOM05D006410 ORTHO05D007914 7.1e-45 184.9 170 63.5
Glyma.09G273700 Glycine max HOM05D006410 ORTHO05D007914 1.2e-44 184.1 191 57.6
VMungo1383G1039 Vigna mungo HOM05D006410 ORTHO05D007914 4.6e-44 182.2 192 56.2
Aqoxy4G03284 Aquilegia oxysepala HOM05D006410 ORTHO05D007914 1.0e-43 181.0 166 61.4
Phvul.008G081500 Phaseolus vulgaris HOM05D006410 ORTHO05D007914 5.1e-43 178.7 192 56.2
CANSAT21G1321 Cannabis sativa HOM05D006410 ORTHO05D007914 1.1e-42 177.6 190 57.9
MSTRG.5489 Avicennia marina HOM05D006410 ORTHO05D007914 9.6e-42 174.5 167 56.9
EL10Ac7g17116 Beta vulgaris HOM05D006410 ORTHO05D007914 9.6e-42 174.5 192 52.6
arahy.Tifrunner.gnm1.ann1.2Y9ZDG Arachis hypogaea HOM05D006410 ORTHO05D007914 1.3e-41 174.1 192 53.6
ATR1127G206 Amborella trichopoda HOM05D006410 ORTHO05D007914 1.5e-39 167.2 187 50.8
SalBow5G0627 Salvia bowleyana HOM05D006410 ORTHO05D007914 2.0e-39 166.8 169 56.2
SalBow5G5142 Salvia bowleyana HOM05D006410 ORTHO05D007914 2.0e-39 166.8 169 56.2
Hund19754 Selenicereus undatus HOM05D006410 ORTHO05D007914 5.8e-39 165.2 194 52.1
AUR62029781 Chenopodium quinoa HOM05D006410 ORTHO05D007914 2.2e-38 163.3 174 54.6
Zm00001eb395200 Zea mays HOM05D006410 ORTHO05D007914 2.2e-38 163.3 167 56.3
arahy.Tifrunner.gnm1.ann1.PEH6CG Arachis hypogaea HOM05D006410 ORTHO05D007914 4.9e-38 162.2 210 51.0
Thhalv10017800m.g Eutrema salsugineum HOM05D006410 ORTHO05D007914 4.9e-38 162.2 189 54.5
SGA_v2.0_scaffold85G26601 Striga asiatica HOM05D006410 ORTHO05D007914 4.9e-38 162.2 187 51.3
HPP92_026801 Vanilla planifolia HOM05D006410 ORTHO05D007914 4.9e-38 162.2 164 53.0
HPP92_000776 Vanilla planifolia HOM05D006410 ORTHO05D007914 1.1e-37 161.0 164 52.4
arahy.Tifrunner.gnm1.ann1.A09QMR Arachis hypogaea HOM05D006410 ORTHO05D007914 1.2e-36 157.5 243 45.7
THA.LOC104806212 Tarenaya hassleriana HOM05D006410 ORTHO05D007914 3.5e-36 156.0 153 59.5
Carub.0004s2056 Capsella rubella HOM05D006410 ORTHO05D007914 4.6e-36 155.6 155 57.4
CARHR133250 Cardamine hirsuta HOM05D006410 ORTHO05D007914 7.9e-36 154.8 155 60.0
BcaB01g03675 Brassica carinata HOM05D006410 ORTHO05D007914 3.9e-35 152.5 156 56.4
Sc07g0005960 Simmondsia chinensis HOM05D006410 ORTHO05D007914 3.9e-35 152.5 129 69.0
AL4G35850 Arabidopsis lyrata HOM05D006410 ORTHO05D007914 6.7e-35 151.8 136 62.5
AT2G38570 Arabidopsis thaliana HOM05D006410 ORTHO05D007914 1.6e-33 147.1 136 61.0
BcaC01g05529 Brassica carinata HOM05D006410 ORTHO05D007914 2.1e-33 146.7 152 55.9
BolC3t14920H Brassica oleracea HOM05D006410 ORTHO05D007914 2.1e-33 146.7 152 55.9
Sp4g20910 Schrenkiella parvula HOM05D006410 ORTHO05D007914 3.7e-33 146.0 153 56.9
C03p25260 Brassica napus HOM05D006410 ORTHO05D007914 1.1e-32 144.4 152 55.3
BraA03t11374Z Brassica rapa HOM05D006410 ORTHO05D007914 1.4e-32 144.1 136 58.8
A03p21390 Brassica napus HOM05D006410 ORTHO05D007914 2.0e-31 140.2 136 58.1
SEGI_21416 Sequoiadendron giganteum HOM05D006410 ORTHO05D007914 8.4e-30 134.8 179 43.0
Lj3A940G60 Lonicera japonica HOM05D006410 ORTHO05D007914 3.4e-23 112.8 75 80.0
arahy.Tifrunner.gnm1.ann1.CPU7B3 Arachis hypogaea HOM05D006410 ORTHO05D007914 5.9e-23 112.1 192 41.7
Ca_07774_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 1.3e-22 110.9 87 70.1
BcaB01g00971 Brassica carinata HOM05D006410 ORTHO05D007914 2.2e-22 110.2 97 66.0
Ca_07767_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 2.2e-22 110.2 98 63.3
AagrBONN_evm.TU.Sc2ySwM_344.4011 Anthoceros agrestis HOM05D006410 ORTHO05D007914 1.0e-19 101.3 144 39.6
Cpa.g.sc86.77 Carica papaya HOM05D006410 ORTHO05D007914 1.3e-17 94.4 177 41.2
Lsat_1_v5_gn_8_97960 Lactuca sativa HOM05D006410 ORTHO05D007914 6.9e-16 88.6 58 77.6
Duzib151G0462 Durio zibethinus HOM05D006410 ORTHO05D007914 2.9e-14 83.2 61 72.1
CDE04G1109 Ceratophyllum demersum HOM05D040252 ORTHO05D007914 1.1e-13 81.3 55 76.4
MCO09G517 Micromonas commoda HOM05D006410 ORTHO05D007914 1.4e-13 80.9 158 35.4
MELO3C025226.2 Cucumis melo HOM05D006410 ORTHO05D007914 1.8e-08 63.9 71 49.3
Os03g0334100 Oryza sativa ssp. japonica HOM05D006410 ORTHO05D007914 2.2e-06 57.0 38 68.4


User provided reference genes

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