Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0050429 Camellia sinensis var. sinensis HOM05D007324 ORTHO05D007884 8.1e-44 180.3 107 100.0
Actinidia14815 Actinidia chinensis HOM05D007324 ORTHO05D007884 3.3e-21 105.1 111 54.1
CiPaw.11G092000 Carya illinoinensis HOM05D007324 ORTHO05D007884 9.3e-16 87.0 126 45.2
Solyc06g061110.2 Solanum lycopersicum HOM05D007324 ORTHO05D007884 3.5e-15 85.1 123 46.3
Sopen06g021310 Solanum pennellii HOM05D007324 ORTHO05D007884 6.0e-15 84.3 123 46.3
CSS0048146 Camellia sinensis var. sinensis HOM05D007324 ORTHO05D007884 1.0e-14 83.6 124 46.0
Eucgr.E00290 Eucalyptus grandis HOM05D007324 ORTHO05D007884 1.3e-14 83.2 137 42.3
Atru.chr6.1738 Acer truncatum HOM05D007324 ORTHO05D007884 5.1e-14 81.3 120 43.3
Lj2A242T77 Lonicera japonica HOM05D007324 ORTHO05D007884 6.7e-14 80.9 127 46.5
HanXRQChr02g0043531 Helianthus annuus HOM05D007324 ORTHO05D007884 8.7e-14 80.5 108 44.4
CSS0008196 Camellia sinensis var. sinensis HOM05D007324 ORTHO05D007884 1.9e-13 79.3 124 44.4
ECA240G0465 Erigeron canadensis HOM05D007324 ORTHO05D007884 3.7e-12 75.1 133 39.1
TWI81G0167 Tripterygium wilfordii HOM05D007324 ORTHO05D007884 4.8e-12 74.7 106 47.2
DCAR_005623 Daucus carota HOM05D007324 ORTHO05D007884 6.2e-12 74.3 111 45.0
Lsat_1_v5_gn_6_78560 Lactuca sativa HOM05D007324 ORTHO05D007884 6.2e-12 74.3 145 37.2
PGSC0003DMG400002093 Solanum tuberosum HOM05D007324 ORTHO05D007884 1.1e-11 73.6 120 43.3
HanXRQChr03g0084061 Helianthus annuus HOM05D007324 ORTHO05D007884 2.4e-11 72.4 127 40.2
Aa31LG9G15320 Aethionema arabicum HOM05D011082 ORTHO05D007884 4.0e-11 71.6 96 45.8
Migut.E01386 Erythranthe guttata HOM05D007324 ORTHO05D007884 5.3e-11 71.2 109 41.3
Glyma.05G112000 Glycine max HOM05D007324 ORTHO05D007884 5.3e-11 71.2 131 40.5
Oeu047787.1 Olea europaea HOM05D007324 ORTHO05D007884 6.9e-11 70.9 117 42.7
PGR042G1904 Punica granatum HOM05D007324 ORTHO05D007884 1.5e-10 69.7 126 37.3
Cfa012419 Carpinus fangiana HOM05D007324 ORTHO05D007884 2.0e-10 69.3 113 45.1
Phvul.003G230300 Phaseolus vulgaris HOM05D007324 ORTHO05D007884 2.0e-10 69.3 107 44.9
Glyma.17G155000 Glycine max HOM05D007324 ORTHO05D007884 7.6e-10 67.4 132 39.4
FvH4_5g21820 Fragaria vesca HOM05D031477 ORTHO05D007884 1.0e-09 67.0 97 57.7
CARHR129450 Cardamine hirsuta HOM05D011082 ORTHO05D007884 2.2e-09 65.9 96 44.8
SGA_v2.0_scaffold144G35830 Striga asiatica HOM05D007324 ORTHO05D007884 4.9e-09 64.7 103 40.8
arahy.Tifrunner.gnm1.ann1.0E68DR Arachis hypogaea HOM05D007324 ORTHO05D007884 8.4e-09 63.9 124 40.3
arahy.Tifrunner.gnm1.ann1.69TWVD Arachis hypogaea HOM05D007324 ORTHO05D007884 8.4e-09 63.9 124 40.3
Thhalv10017485m.g Eutrema salsugineum HOM05D011082 ORTHO05D007884 1.1e-08 63.5 84 42.9
Potri.001G143700 Populus trichocarpa HOM05D007324 ORTHO05D007884 2.5e-08 62.4 121 46.3
Ciclev10033018m.g Citrus clementina HOM05D007324 ORTHO05D007884 3.2e-08 62.0 141 36.2
BcaB02g09441 Brassica carinata HOM05D011082 ORTHO05D007884 9.3e-08 60.5 96 42.7
THA.LOC104814440 Tarenaya hassleriana HOM05D011082 ORTHO05D007884 1.2e-07 60.1 91 59.3
CsaV3_3G001850 Cucumis sativus L. HOM05D007324 ORTHO05D007884 2.7e-07 58.9 118 42.4
Sp4g17510 Schrenkiella parvula HOM05D011082 ORTHO05D007884 6.0e-07 57.8 96 42.7
CAN.G201.20 Capsicum annuum HOM05D007324 ORTHO05D007884 7.9e-07 57.4 136 35.3
Hma1.2p1_0585F.1_g183650 Hydrangea macrophylla HOM05D007324 ORTHO05D007884 7.9e-07 57.4 77 48.1
Cc08_g02520 Coffea canephora HOM05D007324 ORTHO05D007884 1.0e-06 57.0 99 42.4
Dinv28942 Davidia involucrata HOM05D007324 ORTHO05D007884 1.3e-06 56.6 111 50.5
Ah.07g200240 Amaranthus hybridus HOM05D007324 ORTHO05D007884 1.8e-06 56.2 100 41.0
Lalb_Chr16g0386011 Lupinus albus HOM05D007324 ORTHO05D007884 1.8e-06 56.2 110 40.0
AT2G35300 Arabidopsis thaliana HOM05D011082 ORTHO05D007884 2.3e-06 55.8 96 40.6
BraA05t19986Z Brassica rapa HOM05D011082 ORTHO05D007884 2.3e-06 55.8 96 41.7
Actinidia09218 Actinidia chinensis HOM05D007324 ORTHO05D007884 3.0e-06 55.5 111 37.8
A05p10480 Brassica napus HOM05D011082 ORTHO05D007884 3.0e-06 55.5 96 41.7
Medtr4g098480 Medicago truncatula HOM05D007324 ORTHO05D007884 3.0e-06 55.5 91 41.8
Haze_08257 Corylus avellana HOM05D007324 ORTHO05D007884 3.9e-06 55.1 89 44.9
COL.COLO4_17062 Corchorus olitorius HOM05D007324 ORTHO05D007884 8.7e-06 53.9 146 41.8


User provided reference genes

Program Settings