Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0050426 Camellia sinensis var. sinensis HOM05D005967 ORTHO05D005174 2.3e-85 318.9 170 100.0
Dinv37179 Davidia involucrata HOM05D005967 ORTHO05D005174 6.6e-24 114.8 173 45.7
Hma1.2p1_1513F.1_g288050 Hydrangea macrophylla HOM05D005967 ORTHO05D005174 1.1e-15 87.4 175 40.0
Oeu036150.1 Olea europaea HOM05D005967 ORTHO05D005174 6.9e-13 78.2 138 43.5
Rhsim05G0192000 Rhododendron simsii HOM05D005967 ORTHO05D005174 9.0e-13 77.8 162 42.0
TAR623G0987 Trochodendron aralioides HOM05D005967 ORTHO05D005174 4.5e-12 75.5 182 37.4
vmacro20146 Vaccinium macrocarpon HOM05D005967 ORTHO05D005174 5.8e-12 75.1 116 47.4
Duzib106G1613 Durio zibethinus HOM05D005967 ORTHO05D005174 2.9e-11 72.8 187 38.0
Thecc.05G040600 Theobroma cacao HOM05D005967 ORTHO05D005174 8.4e-11 71.2 180 36.1
CSS0006279 Camellia sinensis var. sinensis HOM05D005967 ORTHO05D005174 1.1e-10 70.9 163 39.3
TAR636G2062 Trochodendron aralioides HOM05D000645 ORTHO05D000494 1.9e-10 70.1 124 46.8
QL07p048152 Quercus lobata HOM05D005967 ORTHO05D005174 2.4e-10 69.7 173 34.1
QL01p032269 Quercus lobata HOM05D005967 ORTHO05D005174 4.2e-10 68.9 184 34.2
Manes.04G034400 Manihot esculenta HOM05D005967 ORTHO05D005174 5.4e-10 68.6 169 37.3
Nn5g26925 Nelumbo nucifera HOM05D005967 ORTHO05D005174 7.1e-10 68.2 103 46.6
CiPaw.09G192100 Carya illinoinensis HOM05D005967 ORTHO05D005174 9.3e-10 67.8 86 50.0
Oeu007791.1 Olea europaea HOM05D005967 ORTHO05D005174 2.1e-09 66.6 154 35.1
Migut.J00334 Erythranthe guttata HOM05D005967 ORTHO05D005174 2.7e-09 66.2 114 43.9
Oeu011403.1 Olea europaea HOM05D005967 ORTHO05D005174 3.5e-09 65.9 142 35.9
CiPaw.13G095300 Carya illinoinensis HOM05D005967 ORTHO05D005174 4.6e-09 65.5 86 51.2
Oeu036152.1 Olea europaea HOM05D005967 ORTHO05D005174 4.6e-09 65.5 142 39.4
Manes.11G131200 Manihot esculenta HOM05D005967 ORTHO05D005174 6.0e-09 65.1 195 33.8
Duzib150G1094 Durio zibethinus HOM05D005967 ORTHO05D005174 7.9e-09 64.7 80 52.5
Nn2g10378 Nelumbo nucifera HOM05D005967 ORTHO05D005174 7.9e-09 64.7 84 50.0
MSTRG.5669 Avicennia marina HOM05D005967 ORTHO05D005174 1.0e-08 64.3 174 39.7
Manes.09G089000 Manihot esculenta HOM05D005967 ORTHO05D005174 1.0e-08 64.3 175 34.3
Gohir.D04G121000 Gossypium hirsutum HOM05D005967 ORTHO05D005174 1.3e-08 63.9 174 30.5
Gorai.012G103600 Gossypium raimondii HOM05D005967 ORTHO05D005174 1.3e-08 63.9 174 30.5
Duzib170G1125 Durio zibethinus HOM05D005967 ORTHO05D005174 3.0e-08 62.8 77 49.4
Gorai.002G258000 Gossypium raimondii HOM05D005967 ORTHO05D005174 3.0e-08 62.8 90 44.4
Gohir.A07G098000 Gossypium hirsutum HOM05D005967 ORTHO05D005174 5.1e-08 62.0 106 45.3
Gohir.D01G212200 Gossypium hirsutum HOM05D005967 ORTHO05D005174 5.1e-08 62.0 86 43.0
Gohir.D07G102400 Gossypium hirsutum HOM05D005967 ORTHO05D005174 5.1e-08 62.0 106 45.3
TWI31G0692 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 5.1e-08 62.0 80 45.0
CANSAT54G2543 Cannabis sativa HOM05D005967 ORTHO05D005174 8.7e-08 61.2 76 55.3
Potri.006G084700 Populus trichocarpa HOM05D005967 ORTHO05D005174 1.1e-07 60.8 176 35.8
Oeu038352.1 Olea europaea HOM05D005967 ORTHO05D005174 2.5e-07 59.7 155 36.1
Eucgr.A01260 Eucalyptus grandis HOM05D005967 ORTHO05D005174 3.3e-07 59.3 167 37.7
Gohir.A01G222700 Gossypium hirsutum HOM05D005967 ORTHO05D005174 3.3e-07 59.3 84 41.7
Hma1.2p1_1829F.1_g304460 Hydrangea macrophylla HOM05D005967 ORTHO05D005174 4.3e-07 58.9 149 32.9
Gorai.001G110300 Gossypium raimondii HOM05D005967 ORTHO05D005174 5.6e-07 58.5 106 43.4
Cpa.g.sc81.161 Carica papaya HOM05D005967 ORTHO05D005174 7.4e-07 58.2 89 42.7
CSS0050430 Camellia sinensis var. sinensis HOM05D005967 ORTHO05D005174 9.6e-07 57.8 130 38.5
Oeu024352.1 Olea europaea HOM05D005967 ORTHO05D005174 9.6e-07 57.8 133 33.8
Sed0016652 Sechium edule HOM05D023073 ORTHO05D005174 9.6e-07 57.8 109 39.4
Aqoxy2G02105 Aquilegia oxysepala HOM05D005967 ORTHO05D005174 1.3e-06 57.4 152 34.2
Cfa017389 Carpinus fangiana HOM05D005967 ORTHO05D005174 1.3e-06 57.4 68 44.1
Gohir.D03G126300 Gossypium hirsutum HOM05D005967 ORTHO05D005174 1.3e-06 57.4 78 48.7
Gohir.A04G082200 Gossypium hirsutum HOM05D005967 ORTHO05D005174 1.6e-06 57.0 77 46.8
Sabra06G0064300 Salix brachista HOM05D000729 ORTHO05D001063 1.6e-06 57.0 141 35.5
Aqoxy4G02913 Aquilegia oxysepala HOM05D005967 ORTHO05D005174 2.1e-06 56.6 189 31.7
Gorai.003G132600 Gossypium raimondii HOM05D005967 ORTHO05D005174 2.1e-06 56.6 81 46.9
MBI05_g30241_MAGBIO Magnolia biondii HOM05D005967 ORTHO05D005174 2.1e-06 56.6 144 33.3
Sabra09G0021100 Salix brachista HOM05D005967 ORTHO05D005174 2.1e-06 56.6 80 50.0
MSTRG.19086 Avicennia marina HOM05D005967 ORTHO05D005174 2.8e-06 56.2 146 34.2
Prupe.6G254000 Prunus persica HOM05D005967 ORTHO05D005174 2.8e-06 56.2 129 34.9
Thecc.09G322800 Theobroma cacao HOM05D005967 ORTHO05D005174 2.8e-06 56.2 107 42.1
CiPaw.14G068900 Carya illinoinensis HOM05D005967 ORTHO05D005174 3.7e-06 55.8 180 33.9
TWI53G1171 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 6.2e-06 55.1 141 34.0
Potri.001G239000 Populus trichocarpa HOM05D005967 ORTHO05D005174 8.1e-06 54.7 176 33.0


User provided reference genes

Program Settings