Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0050380 Camellia sinensis var. sinensis HOM05D005062 ORTHO05D006410 7.7e-234 813.5 439 100.0
CSS0021342 Camellia sinensis var. sinensis HOM05D005062 ORTHO05D006410 2.9e-225 785.0 449 96.2
Actinidia18593 Actinidia chinensis HOM05D000444 ORTHO05D000489 2.7e-162 575.9 425 76.2
Rhsim03G0099700 Rhododendron simsii HOM05D005062 ORTHO05D006410 7.9e-154 547.7 510 65.3
MD02G1255900 Malus domestica HOM05D005062 ORTHO05D006410 4.1e-150 535.4 421 69.4
Dinv11848 Davidia involucrata HOM05D005062 ORTHO05D006410 8.5e-148 527.7 357 81.2
Cfa010314 Carpinus fangiana HOM05D005062 ORTHO05D006410 3.2e-147 525.8 419 70.9
CiPaw.13G040200 Carya illinoinensis HOM05D005062 ORTHO05D006410 7.2e-147 524.6 422 70.9
Oeu026579.1 Olea europaea HOM05D005062 ORTHO05D006410 3.6e-146 522.3 430 70.7
TAR623G1543 Trochodendron aralioides HOM05D005062 ORTHO05D006410 2.3e-145 519.6 422 69.7
Atru.chr12.1008 Acer truncatum HOM05D005062 ORTHO05D006410 8.8e-145 517.7 412 70.4
QL04p046667 Quercus lobata HOM05D005062 ORTHO05D006410 1.1e-144 517.3 457 66.1
Eucgr.J00992 Eucalyptus grandis HOM05D005062 ORTHO05D006410 3.3e-144 515.8 429 67.8
GSVIVG01011284001 Vitis vinifera HOM05D005062 ORTHO05D006410 5.7e-144 515.0 456 66.7
PGR044G2170 Punica granatum HOM05D005062 ORTHO05D006410 1.1e-142 510.8 423 68.8
Duzib106G1045 Durio zibethinus HOM05D005062 ORTHO05D006410 1.4e-142 510.4 417 68.6
Nn2g14130 Nelumbo nucifera HOM05D005062 ORTHO05D006410 2.4e-142 509.6 424 65.8
Potri.008G021600 Populus trichocarpa HOM05D005062 ORTHO05D006410 2.4e-142 509.6 423 67.4
Sabra08G0014600 Salix brachista HOM05D005062 ORTHO05D006410 2.0e-141 506.5 422 66.8
Cpa.g.sc183.10 Carica papaya HOM05D005062 ORTHO05D006410 8.5e-140 501.1 416 68.3
RcHm_v2.0_Chr1g0332571 Rosa chinensis HOM05D005062 ORTHO05D006410 8.5e-140 501.1 429 66.7
Solyc07g014740.3 Solanum lycopersicum HOM05D005062 ORTHO05D006410 2.5e-139 499.6 428 65.7
ECA233G2289 Erigeron canadensis HOM05D005062 ORTHO05D006410 1.6e-138 496.9 413 69.0
Manes.10G058650 Manihot esculenta HOM05D005062 ORTHO05D006410 7.9e-138 494.6 421 66.7
HanXRQChr08g0217771 Helianthus annuus HOM05D005062 ORTHO05D006410 1.4e-137 493.8 436 65.8
Gorai.008G099000 Gossypium raimondii HOM05D005062 ORTHO05D006410 3.0e-137 492.7 417 66.7
Gohir.A12G092722 Gossypium hirsutum HOM05D005062 ORTHO05D006410 4.4e-136 488.8 417 66.4
CAN.G54.5 Capsicum annuum HOM05D005062 ORTHO05D006410 2.2e-135 486.5 417 66.4
Nitab4.5_0010225g0010 Nicotiana tabacum HOM05D005062 ORTHO05D006410 2.2e-135 486.5 427 65.1
DCAR_006341 Daucus carota HOM05D005062 ORTHO05D006410 4.8e-135 485.3 419 64.7
Migut.F01613 Erythranthe guttata HOM05D005062 ORTHO05D006410 4.8e-135 485.3 400 68.8
FvH4_7g05590 Fragaria vesca HOM05D005062 ORTHO05D006410 4.5e-133 478.8 421 66.0
FAN01G3081 Fragaria x ananassa HOM05D005062 ORTHO05D006410 4.5e-133 478.8 421 66.0
FAN10G1073 Fragaria x ananassa HOM05D005062 ORTHO05D006410 5.0e-132 475.3 421 65.8
Lsat_1_v5_gn_8_23960 Lactuca sativa HOM05D005062 ORTHO05D006410 8.5e-132 474.6 428 62.9
THA.LOC104824209 Tarenaya hassleriana HOM05D005062 ORTHO05D006410 3.6e-130 469.2 364 71.2
CsaV3_2G034960 Cucumis sativus L. HOM05D005062 ORTHO05D006410 6.1e-130 468.4 380 67.4
HanXRQChr11g0342201 Helianthus annuus HOM05D005062 ORTHO05D006410 1.8e-129 466.8 426 63.4
Aqoxy2G01214 Aquilegia oxysepala HOM05D005062 ORTHO05D006410 6.7e-129 464.9 427 64.4
FAN23G1954 Fragaria x ananassa HOM05D005062 ORTHO05D006410 8.8e-129 464.5 420 64.3
SalBow6G6867 Salvia bowleyana HOM05D005062 ORTHO05D006410 3.3e-128 462.6 341 73.3
Lsat_1_v5_gn_2_104621 Lactuca sativa HOM05D005062 ORTHO05D006410 4.4e-128 462.2 435 61.6
AUR62034504 Chenopodium quinoa HOM05D005062 ORTHO05D006410 5.7e-128 461.8 424 61.1
FAN23G1474 Fragaria x ananassa HOM05D005062 ORTHO05D006410 7.4e-128 461.5 343 74.1
Glyma.10G111800 Glycine max HOM05D005062 ORTHO05D006410 1.7e-127 460.3 360 68.1
Cc02_g09770 Coffea canephora HOM05D005062 ORTHO05D006410 2.2e-127 459.9 345 73.6
Lj5g0026270 Lotus japonicus HOM05D005062 ORTHO05D006410 4.8e-127 458.8 362 67.4
Lalb_Chr19g0129181 Lupinus albus HOM05D005062 ORTHO05D006410 6.3e-127 458.4 364 67.6
FAN06G1220 Fragaria x ananassa HOM05D005062 ORTHO05D006410 8.2e-127 458.0 395 67.6
MSTRG.8110 Avicennia marina HOM05D005062 ORTHO05D006410 1.8e-126 456.8 426 62.9
Peaxi162Scf00235g10011 Petunia axillaris HOM05D005062 ORTHO05D006410 1.8e-126 456.8 419 63.0
ECA238G3155 Erigeron canadensis HOM05D005062 ORTHO05D006410 3.1e-126 456.1 381 65.4
Ca_12731_v3 Cicer arietinum L. HOM05D005062 ORTHO05D006410 3.5e-125 452.6 428 59.8
Phvul.007G247700 Phaseolus vulgaris HOM05D005062 ORTHO05D006410 4.5e-125 452.2 373 66.8
Medtr1g050462 Medicago truncatula HOM05D005062 ORTHO05D006410 5.9e-125 451.8 364 66.5
arahy.Tifrunner.gnm1.ann1.ZAGE2X Arachis hypogaea HOM05D005062 ORTHO05D006410 7.2e-123 444.9 366 65.8
arahy.Tifrunner.gnm1.ann1.BZ57JC Arachis hypogaea HOM05D005062 ORTHO05D006410 1.2e-122 444.1 352 67.6
AT3G56160 Arabidopsis thaliana HOM05D005062 ORTHO05D006410 8.0e-122 441.4 368 67.1
FAN23G2695 Fragaria x ananassa HOM05D005062 ORTHO05D006410 6.8e-121 438.3 392 64.8
Sp5g06340 Schrenkiella parvula HOM05D005062 ORTHO05D006410 6.8e-121 438.3 370 66.8
AL5G37480 Arabidopsis lyrata HOM05D005062 ORTHO05D006410 8.8e-121 438.0 357 67.8
BcaC07g39930 Brassica carinata HOM05D002435 ORTHO05D002550 3.4e-120 436.0 370 65.9
BolC8t50765H Brassica oleracea HOM05D002435 ORTHO05D002550 3.4e-120 436.0 370 65.9
A09p49130 Brassica napus HOM05D002435 ORTHO05D002550 4.4e-120 435.6 370 66.5
BraA09t40366Z Brassica rapa HOM05D005062 ORTHO05D006410 4.4e-120 435.6 370 66.5
CDE06G2329 Ceratophyllum demersum HOM05D005062 ORTHO05D006410 1.7e-119 433.7 375 61.9
GSVIVG01036146001 Vitis vinifera HOM05D005062 ORTHO05D006410 5.3e-118 428.7 421 58.4
BcaB01g00026 Brassica carinata HOM05D002435 ORTHO05D002550 7.0e-118 428.3 369 65.0
C08p31440 Brassica napus HOM05D002435 ORTHO05D002550 7.0e-118 428.3 371 65.8
HanXRQChr08g0217571 Helianthus annuus HOM05D005062 ORTHO05D006410 2.7e-117 426.4 417 58.0
ATR0081G026 Amborella trichopoda HOM05D005062 ORTHO05D006410 5.5e-115 418.7 338 64.5
CiPaw.14G101300 Carya illinoinensis HOM05D005062 ORTHO05D006410 1.8e-113 413.7 383 58.2
Sopen07g005620 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-113 413.7 372 64.5
FAN03G1004 Fragaria x ananassa HOM05D005062 ORTHO05D006410 4.0e-113 412.5 350 68.3
Os02g0531200 Oryza sativa ssp. japonica HOM05D005062 ORTHO05D006410 6.8e-113 411.8 340 63.2
Thhalv10006005m.g Eutrema salsugineum HOM05D005062 ORTHO05D006410 1.3e-111 407.5 346 67.6
PGR102G2753 Punica granatum HOM05D005062 ORTHO05D006410 1.3e-111 407.5 412 55.8
EL10As25g24233 Beta vulgaris HOM05D005062 ORTHO05D006410 4.1e-110 402.5 479 51.1
Sed0016949 Sechium edule HOM05D005062 ORTHO05D006410 1.6e-109 400.6 368 63.0
HPP92_007815 Vanilla planifolia HOM05D005062 ORTHO05D006410 9.5e-107 391.3 423 54.8
TPR.G10638 Trifolium pratense HOM05D005062 ORTHO05D006410 3.0e-105 386.3 283 71.7
Eucgr.B03869 Eucalyptus grandis HOM05D005062 ORTHO05D006410 9.8e-104 381.3 337 57.6
Thecc.10G106400 Theobroma cacao HOM05D005062 ORTHO05D006410 5.4e-102 375.6 325 63.4
Sc12g0004460 Simmondsia chinensis HOM05D005062 ORTHO05D006410 2.7e-101 373.2 334 61.4
Ah.09g232820 Amaranthus hybridus HOM05D005062 ORTHO05D006410 2.9e-100 369.8 350 59.7
Ah.08g215800 Amaranthus hybridus HOM05D005062 ORTHO05D006410 2.2e-95 353.6 343 54.2
Gohir.D12G091480 Gossypium hirsutum HOM05D005062 ORTHO05D006410 2.2e-95 353.6 323 62.8
VMungo0720G3089 Vigna mungo HOM05D000444 ORTHO05D000489 2.3e-92 343.6 485 47.2
Hund06778 Selenicereus undatus HOM05D005062 ORTHO05D006410 1.2e-90 337.8 396 51.8
Ciclev10032297m.g Citrus clementina HOM05D005062 ORTHO05D006410 2.0e-88 330.5 289 66.8
CiPaw.14G101100 Carya illinoinensis HOM05D005062 ORTHO05D006410 8.3e-87 325.1 403 49.4
unitig_578.g16343 Utricularia gibba HOM05D005062 ORTHO05D006410 8.1e-82 308.5 342 53.8
Zm00001eb242730 Zea mays HOM05D005062 ORTHO05D006410 4.1e-78 296.2 264 59.8
Prupe.2G079400 Prunus persica HOM05D005062 ORTHO05D006410 9.2e-78 295.0 269 62.8
Lj3A928T57 Lonicera japonica HOM05D005062 ORTHO05D006410 6.8e-73 278.9 243 68.7
SGA_v2.0_scaffold13G06459 Striga asiatica HOM05D005062 ORTHO05D006410 1.5e-72 277.7 482 43.8
MD02G1256100 Malus domestica HOM05D005062 ORTHO05D006410 4.4e-72 276.2 260 60.0
Sc20g0001180 Simmondsia chinensis HOM05D003607 ORTHO05D004049 5.8e-72 275.8 212 71.2
Zm00001eb296300 Zea mays HOM05D005062 ORTHO05D006410 5.8e-72 275.8 251 59.8
CARHR166310 Cardamine hirsuta HOM05D005062 ORTHO05D006410 1.7e-71 274.2 221 69.2
AUR62009772 Chenopodium quinoa HOM05D005062 ORTHO05D006410 2.9e-71 273.5 346 46.8
EL10Ac7g15813 Beta vulgaris HOM05D005062 ORTHO05D006410 2.0e-64 250.8 334 44.6
Carub.0005s2291 Capsella rubella HOM05D005062 ORTHO05D006410 2.0e-64 250.8 210 66.2
Haze_02484 Corylus avellana HOM05D005062 ORTHO05D006410 3.8e-63 246.5 233 63.9
Mapoly0046s0115 Marchantia polymorpha HOM05D005062 ORTHO05D006410 3.6e-58 229.9 338 40.5
AagrBONN_evm.TU.Sc2ySwM_117.1142 Anthoceros agrestis HOM05D005062 ORTHO05D006410 4.0e-57 226.5 280 49.6
SMO347G0520 Selaginella moellendorffii HOM05D005062 ORTHO05D006410 1.9e-54 217.6 334 42.5
Haze_23392 Corylus avellana HOM05D005062 ORTHO05D006410 1.0e-52 211.8 235 53.6
AUR62039218 Chenopodium quinoa HOM05D005062 ORTHO05D006410 1.3e-52 211.5 344 38.4
Duzib128G0173 Durio zibethinus HOM05D005062 ORTHO05D006410 3.9e-52 209.9 231 55.8
MD02G1256200 Malus domestica HOM05D005062 ORTHO05D006410 1.4e-46 191.4 127 75.6
A02p12720 Brassica napus HOM05D005062 ORTHO05D006410 1.9e-46 191.0 228 55.3
Pp3c3_30210 Physcomitrium patens HOM05D005062 ORTHO05D006410 4.2e-46 189.9 182 55.5
PRCOL_00003606 Prasinoderma coloniale HOM05D005062 ORTHO05D006410 2.1e-45 187.6 350 37.1
Haze_02485 Corylus avellana HOM05D005062 ORTHO05D006410 2.3e-44 184.1 191 57.1
Psat6g129720 Pisum sativum HOM05D005062 ORTHO05D006410 1.1e-43 181.8 150 65.3
Cre09.g395700 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D006410 2.0e-40 171.0 362 36.5
QL01p012456 Quercus lobata HOM05D005062 ORTHO05D006410 5.0e-39 166.4 132 62.9
CBR_g48207 Chara braunii HOM05D000019 ORTHO05D000048 6.5e-39 166.0 218 42.7
Cre09.g393250 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D006410 3.7e-34 150.2 338 35.2
MCO15G192 Micromonas commoda HOM05D005062 ORTHO05D006410 3.4e-32 143.7 296 31.1
Cfa010034 Carpinus fangiana HOM05D005062 ORTHO05D006410 5.9e-32 142.9 120 60.0
COL.COLO4_24555 Corchorus olitorius HOM05D005062 ORTHO05D006410 1.7e-31 141.4 102 75.5
Lj3C928T13 Lonicera japonica HOM05D005062 ORTHO05D006410 8.5e-31 139.0 164 53.0
Cre12.g521950 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D006410 1.9e-30 137.9 351 30.5
QL01p012462 Quercus lobata HOM05D005062 ORTHO05D006410 4.2e-30 136.7 182 47.3
COL.COLO4_24556 Corchorus olitorius HOM05D005062 ORTHO05D006410 9.4e-30 135.6 84 77.4
Ciclev10033893m.g Citrus clementina HOM05D005062 ORTHO05D006410 3.0e-28 130.6 104 67.3
FAN06G0036 Fragaria x ananassa HOM05D005062 ORTHO05D006410 8.8e-28 129.0 124 63.7
Cre06.g250450 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D006410 1.1e-27 128.6 355 28.5
FAN01G2457 Fragaria x ananassa HOM05D005062 ORTHO05D006410 4.3e-27 126.7 82 84.1
Cre02.g147450 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D006410 4.8e-26 123.2 383 29.5
FAN06G3794 Fragaria x ananassa HOM05D005062 ORTHO05D006410 1.1e-25 122.1 110 62.7
Psat6g129760 Pisum sativum HOM05D005062 ORTHO05D006410 2.4e-25 120.9 157 48.4
ClCG02G008710 Citrullus lanatus HOM05D005062 ORTHO05D006410 1.5e-24 118.2 117 54.7
FvH4_7g05870 Fragaria vesca HOM05D005062 ORTHO05D006410 3.4e-24 117.1 117 62.4
Hma1.2p1_0165F.1_g073310 Hydrangea macrophylla HOM05D005062 ORTHO05D006410 2.5e-22 110.9 65 83.1
Ca_00262_v3 Cicer arietinum L. HOM05D005062 ORTHO05D006410 4.2e-22 110.2 121 49.6
Hma1.2p1_1068F.1_g253985 Hydrangea macrophylla HOM05D005062 ORTHO05D006410 2.1e-21 107.8 58 89.7
GSVIVG01034679001 Vitis vinifera HOM05D005062 ORTHO05D006410 2.1e-21 107.8 67 88.1
BraA02t06329Z Brassica rapa HOM05D005062 ORTHO05D006410 2.3e-20 104.4 80 73.8
SEGI_26426 Sequoiadendron giganteum HOM05D005062 ORTHO05D006410 5.1e-20 103.2 75 64.0
Haze_23393 Corylus avellana HOM05D005062 ORTHO05D006410 4.4e-19 100.1 108 48.1
RcHm_v2.0_Chr1g0332551 Rosa chinensis HOM05D005062 ORTHO05D006410 2.6e-16 90.9 59 76.3
Dinv42565 Davidia involucrata HOM05D005062 ORTHO05D006410 8.5e-15 85.9 106 49.1
Hund18750 Selenicereus undatus HOM05D005062 ORTHO05D006410 5.5e-14 83.2 160 34.4
FAN01G2288 Fragaria x ananassa HOM05D005062 ORTHO05D006410 8.0e-13 79.3 55 72.7
RcHm_v2.0_Chr1g0332541 Rosa chinensis HOM05D005062 ORTHO05D006410 8.0e-13 79.3 62 67.7
SEGI_01082 Sequoiadendron giganteum HOM05D005062 ORTHO05D006410 1.8e-12 78.2 59 71.2
Ca_12794_v3 Cicer arietinum L. HOM05D005062 ORTHO05D006410 2.0e-08 64.7 53 64.2
SEGI_13629 Sequoiadendron giganteum HOM05D005062 ORTHO05D006410 3.5e-08 63.9 66 48.5
CDE08G0076 Ceratophyllum demersum HOM05D005062 ORTHO05D006410 5.9e-08 63.2 35 85.7
DCAR_017587 Daucus carota HOM05D000943 ORTHO05D008314 2.9e-07 60.8 384 23.7
MELO3C034937.2 Cucumis melo HOM05D005062 ORTHO05D006410 3.2e-06 57.4 58 56.9
MCO11G881 Micromonas commoda HOM05D005062 ORTHO05D028578 4.2e-06 57.0 366 25.1
Hund10402 Selenicereus undatus HOM05D000943 ORTHO05D008314 5.5e-06 56.6 354 24.3
Cre02.g095086 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D028578 7.2e-06 56.2 233 24.5


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