Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0050367 Camellia sinensis var. sinensis HOM05D007052 ORTHO05D008871 3.3e-83 311.6 153 100.0
Actinidia11870 Actinidia chinensis HOM05D007052 ORTHO05D008871 1.1e-54 216.9 123 86.2
Dinv20100 Davidia involucrata HOM05D007052 ORTHO05D008871 3.2e-54 215.3 124 84.7
Ciclev10016958m.g Citrus clementina HOM05D007052 ORTHO05D008871 5.5e-54 214.5 132 81.1
Lj1A1235T90 Lonicera japonica HOM05D007052 ORTHO05D008871 5.5e-54 214.5 132 81.1
Thecc.06G227100 Theobroma cacao HOM05D007052 ORTHO05D008871 7.2e-54 214.2 134 78.4
PGR042G3505 Punica granatum HOM05D007052 ORTHO05D008871 1.6e-53 213.0 132 80.3
TAR627G0466 Trochodendron aralioides HOM05D007052 ORTHO05D008871 2.1e-53 212.6 121 84.3
GSVIVG01012660001 Vitis vinifera HOM05D007052 ORTHO05D008871 2.1e-53 212.6 113 91.2
Cfa000169 Carpinus fangiana HOM05D007052 ORTHO05D008871 3.6e-53 211.8 123 83.7
Gohir.A10G011300 Gossypium hirsutum HOM05D007052 ORTHO05D008871 8.0e-53 210.7 123 82.1
Gorai.011G012000 Gossypium raimondii HOM05D007052 ORTHO05D008871 8.0e-53 210.7 123 82.1
Cc09_g01290 Coffea canephora HOM05D007052 ORTHO05D008871 1.4e-52 209.9 130 79.2
Duzib235G0934 Durio zibethinus HOM05D007052 ORTHO05D008871 1.4e-52 209.9 123 81.3
VMungo0540G2459 Vigna mungo HOM05D007052 ORTHO05D008871 1.8e-52 209.5 132 78.0
TWI38G1879 Tripterygium wilfordii HOM05D007052 ORTHO05D008871 2.3e-52 209.1 128 78.9
Potri.011G010300 Populus trichocarpa HOM05D007052 ORTHO05D008871 5.2e-52 208.0 123 81.3
CANSAT56G3240 Cannabis sativa HOM05D007052 ORTHO05D008871 6.8e-52 207.6 126 80.2
Haze_06850 Corylus avellana HOM05D007052 ORTHO05D008871 6.8e-52 207.6 123 82.1
Rhsim02G0105300 Rhododendron simsii HOM05D007052 ORTHO05D008871 1.5e-51 206.5 136 76.5
Phvul.006G146300 Phaseolus vulgaris HOM05D007052 ORTHO05D008871 4.4e-51 204.9 131 76.3
arahy.Tifrunner.gnm1.ann1.LNF63F Arachis hypogaea HOM05D007052 ORTHO05D008871 1.3e-50 203.4 132 75.8
arahy.Tifrunner.gnm1.ann1.MS5PCD Arachis hypogaea HOM05D007052 ORTHO05D008871 1.3e-50 203.4 132 75.8
vmacro15801 Vaccinium macrocarpon HOM05D007052 ORTHO05D008871 1.7e-50 203.0 134 76.1
ECA248G2484 Erigeron canadensis HOM05D007052 ORTHO05D008871 2.2e-50 202.6 124 80.6
Sc05g0009410 Simmondsia chinensis HOM05D007052 ORTHO05D008871 2.8e-50 202.2 121 79.3
Aqoxy1G03011 Aquilegia oxysepala HOM05D007052 ORTHO05D008871 4.8e-50 201.4 132 75.0
Glyma.09G007000 Glycine max HOM05D007052 ORTHO05D008871 4.8e-50 201.4 146 70.5
Ca_00688_v3 Cicer arietinum L. HOM05D007052 ORTHO05D008871 6.3e-50 201.1 123 77.2
EL10Ac8g20122 Beta vulgaris HOM05D007052 ORTHO05D008871 1.1e-49 200.3 126 77.8
Manes.17G028000 Manihot esculenta HOM05D007052 ORTHO05D008871 1.4e-49 199.9 123 77.2
Glyma.15G111400 Glycine max HOM05D007052 ORTHO05D008871 1.8e-49 199.5 146 69.9
MD10G1325900 Malus domestica HOM05D007052 ORTHO05D008871 3.1e-49 198.7 132 76.5
MD05G1351600 Malus domestica HOM05D007052 ORTHO05D008871 4.1e-49 198.4 132 76.5
SGA_v2.0_scaffold7G03781 Striga asiatica HOM05D007052 ORTHO05D008871 9.1e-49 197.2 126 75.4
Lsat_1_v5_gn_1_129560 Lactuca sativa HOM05D007052 ORTHO05D008871 1.2e-48 196.8 123 75.6
Carub.0006s3216 Capsella rubella HOM05D007052 ORTHO05D008871 1.6e-48 196.4 122 78.7
Lj6g0012328 Lotus japonicus HOM05D007052 ORTHO05D008871 1.6e-48 196.4 123 74.8
Lalb_Chr18g0056571 Lupinus albus HOM05D007052 ORTHO05D008871 1.6e-48 196.4 125 76.8
Sabra11G0007900 Salix brachista HOM05D007052 ORTHO05D008871 1.6e-48 196.4 123 76.4
AT4G04330 Arabidopsis thaliana HOM05D007052 ORTHO05D008871 2.7e-48 195.7 122 77.9
AL6G47870 Arabidopsis lyrata HOM05D007052 ORTHO05D008871 1.7e-47 193.0 122 77.9
Gohir.D06G156800 Gossypium hirsutum HOM05D007052 ORTHO05D008871 2.2e-47 192.6 123 77.2
PSO675G2240 Papaver somniferum HOM05D007052 ORTHO05D008871 2.2e-47 192.6 132 71.2
A09p26390 Brassica napus HOM05D007052 ORTHO05D008871 2.9e-47 192.2 122 77.0
BraA09t38213Z Brassica rapa HOM05D007052 ORTHO05D008871 2.9e-47 192.2 122 77.0
BcaC04g21282 Brassica carinata HOM05D007052 ORTHO05D008871 3.8e-47 191.8 122 77.0
C09p33580 Brassica napus HOM05D007052 ORTHO05D008871 3.8e-47 191.8 122 77.0
BolC9t56192H Brassica oleracea HOM05D007052 ORTHO05D008871 3.8e-47 191.8 122 77.0
CARHR253150 Cardamine hirsuta HOM05D007052 ORTHO05D008871 3.8e-47 191.8 122 77.0
Sed0006602 Sechium edule HOM05D007052 ORTHO05D008871 8.5e-47 190.7 126 73.8
BcaB01g01799 Brassica carinata HOM05D007052 ORTHO05D008871 1.1e-46 190.3 122 76.2
Medtr2g024300 Medicago truncatula HOM05D007052 ORTHO05D008871 1.1e-46 190.3 123 73.2
Eucgr.E03993 Eucalyptus grandis HOM05D007052 ORTHO05D008871 1.5e-46 189.9 130 71.5
Sp6g04520 Schrenkiella parvula HOM05D007052 ORTHO05D008871 1.5e-46 189.9 122 76.2
ATR0624G054 Amborella trichopoda HOM05D007052 ORTHO05D008871 1.9e-46 189.5 135 70.4
MELO3C007415.2 Cucumis melo HOM05D007052 ORTHO05D008871 1.9e-46 189.5 156 65.4
PSO541G4001 Papaver somniferum HOM05D007052 ORTHO05D008871 2.5e-46 189.1 122 74.6
Aa31LG9G9870 Aethionema arabicum HOM05D007052 ORTHO05D008871 3.2e-46 188.7 123 74.8
TPR.G13090 Trifolium pratense HOM05D007052 ORTHO05D008871 3.2e-46 188.7 123 73.2
CDE07G0375 Ceratophyllum demersum HOM05D000570 ORTHO05D001174 5.5e-46 188.0 124 72.6
COL.COLO4_31826 Corchorus olitorius HOM05D007052 ORTHO05D008871 5.5e-46 188.0 110 79.1
ClCG01G021710 Citrullus lanatus HOM05D007052 ORTHO05D008871 7.2e-46 187.6 159 64.8
THA.LOC104812978 Tarenaya hassleriana HOM05D007052 ORTHO05D008871 7.2e-46 187.6 130 70.8
HanXRQChr01g0006501 Helianthus annuus HOM05D007052 ORTHO05D008871 1.6e-45 186.4 122 73.8
Gohir.A06G150600 Gossypium hirsutum HOM05D007052 ORTHO05D008871 8.0e-45 184.1 123 74.0
Migut.M01374 Erythranthe guttata HOM05D007052 ORTHO05D008871 1.8e-44 183.0 124 71.8
CsaV3_6G048750 Cucumis sativus L. HOM05D007052 ORTHO05D008871 2.0e-43 179.5 108 80.6
DCAR_024989 Daucus carota HOM05D007052 ORTHO05D008871 2.0e-43 179.5 115 75.7
Solyc02g081060.4 Solanum lycopersicum HOM05D007052 ORTHO05D008871 2.0e-43 179.5 115 73.9
AUR62012751 Chenopodium quinoa HOM05D007052 ORTHO05D008871 3.4e-43 178.7 123 73.2
QL05p072067 Quercus lobata HOM05D007052 ORTHO05D008871 5.7e-43 177.9 182 56.0
Sopen02g025730 Solanum pennellii HOM05D007052 ORTHO05D008871 9.8e-43 177.2 115 72.2
Os08g0425200 Oryza sativa ssp. japonica HOM05D007052 ORTHO05D008871 6.3e-42 174.5 130 66.2
Hund23440 Selenicereus undatus HOM05D007052 ORTHO05D008871 1.1e-41 173.7 115 72.2
CAN.G1014.43 Capsicum annuum HOM05D007052 ORTHO05D008871 1.6e-40 169.9 116 69.8
Peaxi162Scf00178g00039 Petunia axillaris HOM05D007052 ORTHO05D008871 5.9e-40 167.9 122 68.0
Ah.09g234570 Amaranthus hybridus HOM05D007052 ORTHO05D008871 1.5e-38 163.3 128 67.2
PGSC0003DMG400016462 Solanum tuberosum HOM05D007052 ORTHO05D008871 5.6e-38 161.4 99 78.8
AagrBONN_evm.TU.Sc2ySwM_117.3173 Anthoceros agrestis HOM05D007052 ORTHO05D008871 1.6e-37 159.8 115 65.2
Hund21433 Selenicereus undatus HOM05D007052 ORTHO05D008871 2.1e-37 159.5 157 59.2
Pp3c25_6660 Physcomitrium patens HOM05D007052 ORTHO05D008871 2.8e-37 159.1 115 66.1
SMO118G0387 Selaginella moellendorffii HOM05D007052 ORTHO05D008871 6.8e-36 154.5 115 60.0
Nn1g07250 Nelumbo nucifera HOM05D007052 ORTHO05D008871 2.6e-35 152.5 92 81.5
AUR62021907 Chenopodium quinoa HOM05D007052 ORTHO05D008871 2.4e-33 146.0 83 84.3
CiPaw.09G097200 Carya illinoinensis HOM05D007052 ORTHO05D008871 1.5e-30 136.7 85 81.2
arahy.Tifrunner.gnm1.ann1.ZUMJ7A Arachis hypogaea HOM05D007052 ORTHO05D008871 3.1e-28 129.0 119 58.0
RcHm_v2.0_Chr5g0002341 Rosa chinensis HOM05D007052 ORTHO05D008871 5.2e-28 128.3 93 65.6
SalBow8G1921 Salvia bowleyana HOM05D007052 ORTHO05D008871 6.8e-28 127.9 90 67.8
Prupe.4G016000 Prunus persica HOM05D007052 ORTHO05D008871 8.9e-28 127.5 84 72.6
Atru.chr10.2273 Acer truncatum HOM05D007052 ORTHO05D008871 2.9e-26 122.5 80 71.2
Psat1g177840 Pisum sativum HOM05D007052 ORTHO05D008871 3.7e-26 122.1 80 70.0
Thhalv10029002m.g Eutrema salsugineum HOM05D007052 ORTHO05D008871 3.5e-24 115.5 72 75.0
RcHm_v2.0_Chr7g0236991 Rosa chinensis HOM05D007052 ORTHO05D008871 5.6e-22 108.2 119 51.3
Cre07.g339000 Chlamydomonas reinhardtii HOM05D007052 ORTHO05D008871 2.9e-18 95.9 118 44.1
BcaC04g21271 Brassica carinata HOM05D004489 ORTHO05D039740 6.4e-18 94.7 72 65.3
Gorai.010G183200 Gossypium raimondii HOM05D007052 ORTHO05D008871 5.4e-17 91.7 123 45.5
Cre01.g030350 Chlamydomonas reinhardtii HOM05D007052 ORTHO05D008871 1.2e-16 90.5 116 44.8
Zm00001eb179210 Zea mays HOM05D007052 ORTHO05D008871 2.1e-16 89.7 78 60.3
RcHm_v2.0_Chr5g0002331 Rosa chinensis HOM05D007052 ORTHO05D008871 6.0e-16 88.2 50 86.0
PRCOL_00003846 Prasinoderma coloniale HOM05D007052 ORTHO05D008871 1.1e-14 84.0 116 38.8
MSTRG.7177 Avicennia marina HOM05D007052 ORTHO05D008871 1.2e-13 80.5 48 81.2
FAN25G3667 Fragaria x ananassa HOM05D007052 ORTHO05D008871 2.1e-13 79.7 44 86.4
PRCOL_00004464 Prasinoderma coloniale HOM05D007052 ORTHO05D008871 6.4e-10 68.2 119 31.9
MCO13G382 Micromonas commoda HOM05D007052 ORTHO05D008871 1.4e-09 67.0 141 29.8
Nitab4.5_0007209g0010 Nicotiana tabacum HOM05D007052 ORTHO05D008871 3.2e-09 65.9 37 73.0
FAN21G0414 Fragaria x ananassa HOM05D007052 ORTHO05D008871 6.0e-08 61.6 41 68.3
PRCOL_00003373 Prasinoderma coloniale HOM05D007052 ORTHO05D008871 1.7e-07 60.1 127 30.7
MCO14G271 Micromonas commoda HOM05D007052 ORTHO05D008871 6.6e-07 58.2 126 32.5


User provided reference genes

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