Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0050366 Camellia sinensis var. sinensis HOM05D005198 ORTHO05D006839 3.3e-200 701.4 339 100.0
CSS0046337 Camellia sinensis var. sinensis HOM05D005198 ORTHO05D006839 1.3e-188 662.9 340 95.6
Actinidia28982 Actinidia chinensis HOM05D005198 ORTHO05D006839 9.7e-160 567.0 388 74.5
Rhsim04G0106800 Rhododendron simsii HOM05D005198 ORTHO05D006839 8.2e-159 563.9 388 72.7
Nitab4.5_0011921g0010 Nicotiana tabacum HOM05D005198 ORTHO05D006839 4.1e-150 535.0 345 75.7
QL10p055731 Quercus lobata HOM05D005198 ORTHO05D006839 4.2e-147 525.0 388 67.8
MD15G1424000 Malus domestica HOM05D005198 ORTHO05D006839 8.0e-146 520.8 388 66.8
Lj4A14T50 Lonicera japonica HOM05D005198 ORTHO05D006839 1.0e-145 520.4 390 67.4
Dinv07059 Davidia involucrata HOM05D005198 ORTHO05D006839 2.3e-145 519.2 387 68.0
TAR365G0102 Trochodendron aralioides HOM05D005198 ORTHO05D006839 2.6e-144 515.8 388 68.0
Sopen08g004940 Solanum pennellii HOM05D005198 ORTHO05D006839 4.4e-144 515.0 388 66.0
Prupe.1G207000 Prunus persica HOM05D005198 ORTHO05D006839 9.8e-144 513.8 388 66.0
Solyc08g014060.4 Solanum lycopersicum HOM05D005198 ORTHO05D006839 1.7e-143 513.1 389 65.6
GSVIVG01038139001 Vitis vinifera HOM05D005198 ORTHO05D006839 3.7e-143 511.9 385 66.0
Ciclev10019752m.g Citrus clementina HOM05D005198 ORTHO05D006839 4.8e-143 511.5 388 65.7
Manes.04G036150 Manihot esculenta HOM05D005198 ORTHO05D006839 4.8e-143 511.5 388 65.5
Potri.013G126300 Populus trichocarpa HOM05D005198 ORTHO05D006839 4.8e-143 511.5 388 65.2
PGR142G0872 Punica granatum HOM05D005198 ORTHO05D006839 8.3e-143 510.8 388 66.2
Peaxi162Scf00075g01544 Petunia axillaris HOM05D005198 ORTHO05D006839 1.1e-142 510.4 379 67.5
CAN.G1411.3 Capsicum annuum HOM05D005198 ORTHO05D006839 1.8e-142 509.6 388 65.5
Sabra13G0105600 Salix brachista HOM05D005198 ORTHO05D006839 1.6e-141 506.5 388 64.7
Eucgr.H00311 Eucalyptus grandis HOM05D005198 ORTHO05D006839 2.0e-141 506.1 388 64.2
Atru.BG.83.p Acer truncatum HOM05D005198 ORTHO05D006839 5.9e-141 504.6 374 67.6
Oeu020813.1 Olea europaea HOM05D005198 ORTHO05D006839 2.9e-140 502.3 388 64.4
Hma1.2p1_0150F.1_g066860 Hydrangea macrophylla HOM05D005198 ORTHO05D006839 6.5e-140 501.1 381 65.4
Cc03_g14040 Coffea canephora HOM05D005198 ORTHO05D006839 1.1e-139 500.4 382 66.0
Duzib151G0783 Durio zibethinus HOM05D005198 ORTHO05D006839 2.5e-139 499.2 387 63.6
Thecc.01G302200 Theobroma cacao HOM05D005198 ORTHO05D006839 4.2e-139 498.4 387 64.9
TWI63G1273 Tripterygium wilfordii HOM05D005198 ORTHO05D006839 9.5e-139 497.3 384 64.3
Cpa.g.sc9.361 Carica papaya HOM05D005198 ORTHO05D006839 1.2e-138 496.9 388 63.9
RcHm_v2.0_Chr2g0123631 Rosa chinensis HOM05D005198 ORTHO05D006839 2.8e-138 495.7 390 63.6
Aqoxy2G02750 Aquilegia oxysepala HOM05D005198 ORTHO05D006839 1.0e-137 493.8 388 63.4
Hma1.2p1_0150F.1_g066870 Hydrangea macrophylla HOM05D005198 ORTHO05D006839 2.3e-137 492.7 381 64.0
Lj1g0021010 Lotus japonicus HOM05D005198 ORTHO05D006839 2.3e-137 492.7 388 62.4
TPR.G23517 Trifolium pratense HOM05D005198 ORTHO05D006839 3.0e-137 492.3 388 63.7
Glyma.02G137200 Glycine max HOM05D005198 ORTHO05D006839 1.5e-136 490.0 388 63.7
PSO675G4502 Papaver somniferum HOM05D005198 ORTHO05D006839 1.5e-136 490.0 388 63.1
Gohir.D02G010200 Gossypium hirsutum HOM05D005198 ORTHO05D006839 2.6e-136 489.2 387 63.3
Gorai.005G012500 Gossypium raimondii HOM05D005198 ORTHO05D006839 2.6e-136 489.2 390 62.8
Gohir.A02G009975 Gossypium hirsutum HOM05D005198 ORTHO05D006839 3.4e-136 488.8 387 63.0
Lalb_Chr09g0328121 Lupinus albus HOM05D005198 ORTHO05D006839 4.4e-136 488.4 388 62.9
VMungo0251G3269 Vigna mungo HOM05D005198 ORTHO05D006839 4.4e-136 488.4 388 63.7
Migut.G01222 Erythranthe guttata HOM05D005198 ORTHO05D006839 7.5e-136 487.6 388 62.1
CANSAT11G2028 Cannabis sativa HOM05D005198 ORTHO05D006839 1.3e-135 486.9 382 63.6
PSO732G0749 Papaver somniferum HOM05D005198 ORTHO05D006839 1.3e-135 486.9 388 62.6
arahy.Tifrunner.gnm1.ann1.A4X0ZB Arachis hypogaea HOM05D005198 ORTHO05D006839 1.7e-135 486.5 387 62.8
Hund03196 Selenicereus undatus HOM05D005198 ORTHO05D006839 1.7e-135 486.5 365 66.6
SalBow3G0226 Salvia bowleyana HOM05D005198 ORTHO05D006839 2.2e-135 486.1 403 60.5
Phvul.003G296400 Phaseolus vulgaris HOM05D005198 ORTHO05D006839 4.9e-135 485.0 388 62.6
Glyma.07G208200 Glycine max HOM05D005198 ORTHO05D006839 6.3e-135 484.6 388 63.1
ClCG07G015220 Citrullus lanatus HOM05D005198 ORTHO05D006839 1.4e-134 483.4 388 62.6
FvH4_1g25500 Fragaria vesca HOM05D005198 ORTHO05D006839 1.8e-134 483.0 345 66.7
Medtr4g087280 Medicago truncatula HOM05D005198 ORTHO05D006839 9.2e-134 480.7 388 61.9
AUR62023798 Chenopodium quinoa HOM05D005198 ORTHO05D006839 1.2e-133 480.3 375 63.7
FAN26G1320 Fragaria x ananassa HOM05D005198 ORTHO05D006839 1.2e-133 480.3 388 61.1
arahy.Tifrunner.gnm1.ann1.Q28JUU Arachis hypogaea HOM05D005198 ORTHO05D006839 2.0e-133 479.6 403 60.5
MELO3C017760.2 Cucumis melo HOM05D005198 ORTHO05D006839 2.7e-133 479.2 388 61.9
ECA232G1195 Erigeron canadensis HOM05D005198 ORTHO05D006839 3.5e-133 478.8 388 61.3
vmacro09048 Vaccinium macrocarpon HOM05D005198 ORTHO05D006839 7.8e-133 477.6 279 83.2
AUR62002390 Chenopodium quinoa HOM05D005198 ORTHO05D006839 8.6e-132 474.2 388 61.3
Haze_01365 Corylus avellana HOM05D005198 ORTHO05D006839 1.5e-131 473.4 424 58.5
Sed0009334 Sechium edule HOM05D005198 ORTHO05D006839 1.9e-131 473.0 388 61.3
Ah.13g073540 Amaranthus hybridus HOM05D005198 ORTHO05D006839 1.6e-130 469.9 388 61.1
Psat7g121400 Pisum sativum HOM05D005198 ORTHO05D006839 2.1e-130 469.5 388 61.3
FAN28G0627 Fragaria x ananassa HOM05D005198 ORTHO05D006839 3.6e-130 468.8 394 59.4
THA.LOC104813938 Tarenaya hassleriana HOM05D005198 ORTHO05D006839 1.0e-129 467.2 382 61.5
COL.COLO4_23329 Corchorus olitorius HOM05D005198 ORTHO05D006839 1.5e-128 463.4 401 58.6
SGA_v2.0_scaffold12G06184 Striga asiatica HOM05D005198 ORTHO05D006839 5.8e-128 461.5 367 61.3
Thhalv10018413m.g Eutrema salsugineum HOM05D005198 ORTHO05D006839 1.7e-127 459.9 382 60.7
Lsat_1_v5_gn_9_61481 Lactuca sativa HOM05D005198 ORTHO05D006839 1.7e-127 459.9 369 63.7
Sp5g28150 Schrenkiella parvula HOM05D005198 ORTHO05D006839 1.7e-127 459.9 382 60.7
CARHR066180 Cardamine hirsuta HOM05D005198 ORTHO05D006839 6.4e-127 458.0 382 59.7
ATR0733G245 Amborella trichopoda HOM05D005198 ORTHO05D006839 1.4e-126 456.8 386 59.1
AT1G73180 Arabidopsis thaliana HOM05D005198 ORTHO05D006839 2.7e-125 452.6 382 59.2
Carub.0002s1997 Capsella rubella HOM05D005198 ORTHO05D006839 6.0e-125 451.4 382 58.9
AL2G32950 Arabidopsis lyrata HOM05D005198 ORTHO05D006839 3.9e-124 448.7 382 59.4
BolC6t38540H Brassica oleracea HOM05D005198 ORTHO05D006839 6.6e-124 448.0 396 58.6
Aa31LG4G3470 Aethionema arabicum HOM05D005198 ORTHO05D006839 1.1e-123 447.2 382 59.2
CsaV3_4G002810 Cucumis sativus L. HOM05D005198 ORTHO05D006839 1.1e-123 447.2 403 57.3
A07p29920 Brassica napus HOM05D005198 ORTHO05D006839 5.6e-123 444.9 383 59.3
C06p34190 Brassica napus HOM05D005198 ORTHO05D006839 5.6e-123 444.9 383 59.3
BraA07t30630Z Brassica rapa HOM05D005198 ORTHO05D006839 9.5e-123 444.1 383 59.0
FAN19G2119 Fragaria x ananassa HOM05D005198 ORTHO05D006839 4.0e-121 438.7 418 53.8
FAN23G1744 Fragaria x ananassa HOM05D005198 ORTHO05D006839 5.2e-121 438.3 381 58.3
Nitab4.5_0000122g0140 Nicotiana tabacum HOM05D005198 ORTHO05D006839 1.1e-118 430.6 325 67.4
CDE04G2667 Ceratophyllum demersum HOM05D005198 ORTHO05D006839 9.5e-115 417.5 375 57.3
Sc25g0002780 Simmondsia chinensis HOM05D005198 ORTHO05D006839 1.8e-113 413.3 345 61.2
Atru.chr4.1402 Acer truncatum HOM05D005198 ORTHO05D006839 6.8e-113 411.4 262 76.7
HanXRQChr15g0483441 Helianthus annuus HOM05D005198 ORTHO05D006839 1.3e-111 407.1 334 62.9
Lalb_Chr16g0384461 Lupinus albus HOM05D005198 ORTHO05D006839 6.4e-111 404.8 272 72.4
Zm00001eb246620 Zea mays HOM05D005198 ORTHO05D006839 1.7e-108 396.7 387 49.9
Eucgr.L01724 Eucalyptus grandis HOM05D005198 ORTHO05D006839 3.3e-107 392.5 341 59.5
MBI11_g23940_MAGBIO Magnolia biondii HOM05D005198 ORTHO05D006839 1.1e-105 387.5 260 71.9
EL10Ac3g06083 Beta vulgaris HOM05D005198 ORTHO05D006839 6.8e-105 384.8 272 69.5
BcaC08g45664 Brassica carinata HOM05D005198 ORTHO05D006839 2.4e-102 376.3 385 53.8
DCAR_027527 Daucus carota HOM05D005198 ORTHO05D006839 3.5e-101 372.5 266 66.5
Mapoly0011s0080 Marchantia polymorpha HOM05D005198 ORTHO05D006839 8.7e-100 367.9 382 49.7
unitig_92.g28215 Utricularia gibba HOM05D005198 ORTHO05D006839 1.4e-97 360.5 254 66.9
Pp3c6_14240 Physcomitrium patens HOM05D005198 ORTHO05D006839 6.9e-97 358.2 381 48.3
CBR_g53754 Chara braunii HOM05D005198 ORTHO05D006839 5.6e-91 338.6 386 45.3
Dinv33201 Davidia involucrata HOM05D005198 ORTHO05D006839 4.8e-90 335.5 260 66.5
CiPaw.02G100600 Carya illinoinensis HOM05D005198 ORTHO05D006839 4.2e-86 322.4 262 64.5
Ca_25383_v3 Cicer arietinum L. HOM05D005198 ORTHO05D006839 9.0e-81 304.7 256 61.7
SMO145G0177 Selaginella moellendorffii HOM05D005198 ORTHO05D006839 9.0e-81 304.7 379 40.4
Nn1g09646 Nelumbo nucifera HOM05D005198 ORTHO05D006839 3.4e-80 302.8 255 61.2
Eucgr.H00310 Eucalyptus grandis HOM05D005198 ORTHO05D006839 3.8e-71 272.7 247 57.9
AagrBONN_evm.TU.Sc2ySwM_228.1363 Anthoceros agrestis HOM05D005198 ORTHO05D006839 1.2e-69 267.7 265 50.6
SEGI_32957 Sequoiadendron giganteum HOM05D005198 ORTHO05D006839 5.5e-62 242.3 242 52.5
CAN.G256.23 Capsicum annuum HOM05D005198 ORTHO05D006839 2.0e-56 223.8 154 66.2
PRCOL_00000684 Prasinoderma coloniale HOM05D005198 ORTHO05D006839 8.8e-52 208.4 354 33.6
SHI30330 Sapria himalayana HOM05D000105 ORTHO05D000023 1.0e-47 194.9 191 50.3
Ca_18641_v3 Cicer arietinum L. HOM05D005198 ORTHO05D006839 1.4e-46 191.0 126 68.3
MCO01G167 Micromonas commoda HOM05D005198 ORTHO05D006839 4.4e-43 179.5 414 30.0
SHI30329 Sapria himalayana HOM05D005198 ORTHO05D000023 5.9e-40 169.1 158 54.4
Cre08.g375900 Chlamydomonas reinhardtii HOM05D005198 ORTHO05D006839 2.4e-33 147.1 395 29.1
SEGI_27162 Sequoiadendron giganteum HOM05D005198 ORTHO05D006839 1.7e-31 141.0 126 48.4
BolC3t18675H Brassica oleracea HOM05D005198 ORTHO05D006839 1.5e-27 127.9 101 62.4
Nitab4.5_0009616g0020 Nicotiana tabacum HOM05D005198 ORTHO05D006839 2.6e-27 127.1 67 88.1
Lj3g0007177 Lotus japonicus HOM05D005198 ORTHO05D006839 1.0e-23 115.2 58 84.5
Lj6g0012253 Lotus japonicus HOM05D005198 ORTHO05D006839 1.0e-23 115.2 58 84.5
MBI14_g40932_MAGBIO Magnolia biondii HOM05D005198 ORTHO05D006839 3.8e-23 113.2 66 80.3
Psat1g217120 Pisum sativum HOM05D005198 ORTHO05D006839 1.3e-18 98.2 66 68.2
MBI11_g30564_MAGBIO Magnolia biondii HOM05D005198 ORTHO05D006839 1.7e-18 97.8 58 79.3
Dinv33202 Davidia involucrata HOM05D005198 ORTHO05D006839 2.4e-17 94.0 55 76.4
MBI11_g23941_MAGBIO Magnolia biondii HOM05D005198 ORTHO05D006839 3.2e-17 93.6 46 87.0
DCAR_027526 Daucus carota HOM05D005198 ORTHO05D006839 5.4e-17 92.8 51 76.5
Glyma.03G132500 Glycine max HOM05D005198 ORTHO05D006839 1.2e-16 91.7 74 59.5
Hma1.2p1_0554F.1_g177930 Hydrangea macrophylla HOM05D005198 ORTHO05D006839 5.9e-16 89.4 49 79.6
Lalb_Chr16g0384471 Lupinus albus HOM05D005198 ORTHO05D006839 6.6e-15 85.9 46 80.4
unitig_92.g28214 Utricularia gibba HOM05D005198 ORTHO05D006839 3.3e-14 83.6 46 82.6
Lsat_1_v5_gn_5_150841 Lactuca sativa HOM05D005198 ORTHO05D004031 9.5e-14 82.0 45 80.0
SGA_v2.0_scaffold649G53360 Striga asiatica HOM05D005198 ORTHO05D006839 1.4e-12 78.2 48 70.8
Medtr5g091610 Medicago truncatula HOM05D001363 ORTHO05D006839 1.8e-12 77.8 51 68.6
COL.COLO4_29149 Corchorus olitorius HOM05D005198 ORTHO05D006839 3.4e-11 73.6 65 56.9
MBI07_g28641_MAGBIO Magnolia biondii HOM05D000992 ORTHO05D001928 4.1e-09 66.6 38 81.6
BraA02t06891Z Brassica rapa HOM05D005198 ORTHO05D040308 5.0e-07 59.7 56 51.8
MBI03_g14783_MAGBIO Magnolia biondii HOM05D005198 ORTHO05D006839 1.5e-06 58.2 38 68.4


User provided reference genes

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