Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0050347 Camellia sinensis var. sinensis HOM05D005199 ORTHO05D006277 6.9e-181 637.5 397 100.0
QL10p000401 Quercus lobata HOM05D005199 ORTHO05D006277 9.3e-154 547.4 397 77.3
Haze_07093 Corylus avellana HOM05D005199 ORTHO05D006277 1.2e-153 547.0 399 83.2
Manes.06G127100 Manihot esculenta HOM05D005199 ORTHO05D006277 2.7e-153 545.8 397 80.4
CiPaw.12G000800 Carya illinoinensis HOM05D005199 ORTHO05D006277 1.8e-152 543.1 397 76.3
Dinv13715 Davidia involucrata HOM05D005199 ORTHO05D006277 3.0e-152 542.3 376 87.0
Cfa018703 Carpinus fangiana HOM05D005199 ORTHO05D006277 6.7e-152 541.2 399 71.9
GSVIVG01008655001 Vitis vinifera HOM05D005199 ORTHO05D006277 1.1e-151 540.4 400 80.2
Ciclev10033942m.g Citrus clementina HOM05D005199 ORTHO05D006277 7.4e-151 537.7 401 73.1
Sabra15G0129500 Salix brachista HOM05D005199 ORTHO05D006277 7.4e-151 537.7 397 71.8
SalBow7G2845 Salvia bowleyana HOM05D005199 ORTHO05D006277 7.4e-151 537.7 398 83.9
Sabra15G0127400 Salix brachista HOM05D005199 ORTHO05D006277 1.6e-150 536.6 397 71.5
Potri.015G106900 Populus trichocarpa HOM05D005199 ORTHO05D006277 8.2e-150 534.3 398 71.1
Nn3g16267 Nelumbo nucifera HOM05D005199 ORTHO05D006277 1.1e-149 533.9 387 84.2
Cc04_g05820 Coffea canephora HOM05D005199 ORTHO05D006277 1.4e-149 533.5 400 74.0
Ca_10877_v3 Cicer arietinum L. HOM05D005199 ORTHO05D006277 2.4e-149 532.7 402 80.8
SGA_v2.0_scaffold37G14675 Striga asiatica HOM05D005199 ORTHO05D006277 5.3e-149 531.6 403 81.9
Medtr3g098560 Medicago truncatula HOM05D005199 ORTHO05D006277 9.0e-149 530.8 401 80.3
TWI39G0590 Tripterygium wilfordii HOM05D005199 ORTHO05D006277 1.5e-148 530.0 389 78.1
Prupe.5G140700 Prunus persica HOM05D005199 ORTHO05D006277 2.6e-148 529.3 416 69.5
Actinidia25514 Actinidia chinensis HOM05D005199 ORTHO05D006277 7.7e-148 527.7 397 82.1
Hma1.2p1_0577F.1_g182220 Hydrangea macrophylla HOM05D005199 ORTHO05D006277 1.0e-147 527.3 381 86.4
Psat5g056040 Pisum sativum HOM05D005199 ORTHO05D006277 1.7e-147 526.6 401 81.3
Rhsim08G0198200 Rhododendron simsii HOM05D005199 ORTHO05D006277 1.7e-147 526.6 403 75.9
Atru.chr6.1926 Acer truncatum HOM05D005199 ORTHO05D006277 5.0e-147 525.0 398 82.2
Lj1g0022547 Lotus japonicus HOM05D005199 ORTHO05D006277 1.4e-146 523.5 404 82.9
Nitab4.5_0000976g0090 Nicotiana tabacum HOM05D005199 ORTHO05D006277 2.5e-146 522.7 420 81.2
Peaxi162Scf00314g00633 Petunia axillaris HOM05D005199 ORTHO05D006277 4.2e-146 521.9 411 79.1
CAN.G843.7 Capsicum annuum HOM05D005199 ORTHO05D006277 5.5e-146 521.5 420 82.4
vmacro19190 Vaccinium macrocarpon HOM05D005199 ORTHO05D006277 9.4e-146 520.8 403 82.1
VMungo1309G0841 Vigna mungo HOM05D005199 ORTHO05D006277 1.2e-145 520.4 411 81.8
Migut.I00669 Erythranthe guttata HOM05D005199 ORTHO05D006277 1.6e-145 520.0 408 81.6
Sopen03g037080 Solanum pennellii HOM05D005199 ORTHO05D006277 4.6e-145 518.5 411 83.2
TAR374G0192 Trochodendron aralioides HOM05D005199 ORTHO05D006277 6.1e-145 518.1 376 84.0
Thecc.03G141200 Theobroma cacao HOM05D005199 ORTHO05D006277 7.9e-145 517.7 402 74.1
Nitab4.5_0011600g0020 Nicotiana tabacum HOM05D005199 ORTHO05D006277 1.4e-144 516.9 393 84.7
Dinv23231 Davidia involucrata HOM05D005199 ORTHO05D006277 1.8e-144 516.5 389 83.3
Manes.14G044200 Manihot esculenta HOM05D005199 ORTHO05D006277 3.0e-144 515.8 389 77.9
Oeu013661.1 Olea europaea HOM05D005199 ORTHO05D006277 6.7e-144 514.6 397 78.3
MD06G1129500 Malus domestica HOM05D005199 ORTHO05D006277 8.8e-144 514.2 414 71.3
Duzib205G1536 Durio zibethinus HOM05D005199 ORTHO05D006277 1.1e-143 513.8 407 73.2
MD14G1146700 Malus domestica HOM05D005199 ORTHO05D006277 3.3e-143 512.3 415 78.1
Glyma.06G163600 Glycine max HOM05D005199 ORTHO05D006277 5.0e-139 498.4 414 74.9
Phvul.009G160900 Phaseolus vulgaris HOM05D005199 ORTHO05D006277 1.1e-138 497.3 409 81.7
Gohir.A07G046500 Gossypium hirsutum HOM05D005199 ORTHO05D006277 9.4e-138 494.2 410 76.1
SHI14097 Sapria himalayana HOM05D005199 ORTHO05D006277 4.7e-137 491.9 441 60.1
RcHm_v2.0_Chr7g0188591 Rosa chinensis HOM05D005199 ORTHO05D006277 7.9e-137 491.1 418 77.5
ECA232G4131 Erigeron canadensis HOM05D005199 ORTHO05D006277 1.4e-136 490.3 414 62.3
HanXRQChr09g0273821 Helianthus annuus HOM05D005199 ORTHO05D006277 1.8e-136 490.0 404 67.3
Cpa.g.sc13.181 Carica papaya HOM05D005199 ORTHO05D006277 5.1e-136 488.4 397 67.8
TWI14G0958 Tripterygium wilfordii HOM05D005199 ORTHO05D006277 7.4e-135 484.6 393 72.8
Gohir.D07G050800 Gossypium hirsutum HOM05D005199 ORTHO05D006277 2.4e-133 479.6 410 74.1
Gorai.001G053900 Gossypium raimondii HOM05D005199 ORTHO05D006277 2.4e-133 479.6 410 76.6
FAN04G2629 Fragaria x ananassa HOM05D005199 ORTHO05D006277 9.1e-133 477.6 419 76.6
FAN13G0330 Fragaria x ananassa HOM05D005199 ORTHO05D006277 9.1e-133 477.6 414 73.7
FAN18G4150 Fragaria x ananassa HOM05D005199 ORTHO05D006277 4.5e-132 475.3 417 76.5
MELO3C026157.2 Cucumis melo HOM05D005199 ORTHO05D006277 7.7e-132 474.6 403 74.2
CDE06G1181 Ceratophyllum demersum HOM05D005199 ORTHO05D006277 1.3e-131 473.8 391 62.7
Duzib084G1266 Durio zibethinus HOM05D005199 ORTHO05D006277 2.9e-131 472.6 393 68.4
CsaV3_1G000050 Cucumis sativus L. HOM05D005199 ORTHO05D006277 5.0e-131 471.9 403 74.2
CDE02G3820 Ceratophyllum demersum HOM05D005199 ORTHO05D006277 6.5e-131 471.5 391 62.4
FAN08G3145 Fragaria x ananassa HOM05D005199 ORTHO05D006277 2.5e-130 469.5 411 73.2
arahy.Tifrunner.gnm1.ann1.4TKD14 Arachis hypogaea HOM05D005199 ORTHO05D006277 9.4e-130 467.6 427 74.9
ClCG06G018380 Citrullus lanatus HOM05D005199 ORTHO05D006277 2.1e-129 466.5 362 80.1
COL.COLO4_37264 Corchorus olitorius HOM05D005199 ORTHO05D006277 6.1e-129 464.9 366 79.5
THA.LOC104801769 Tarenaya hassleriana HOM05D005199 ORTHO05D006277 6.1e-129 464.9 419 65.6
DCAR_025645 Daucus carota HOM05D005199 ORTHO05D006277 1.3e-126 457.2 351 74.4
arahy.Tifrunner.gnm1.ann1.P6GRAY Arachis hypogaea HOM05D005199 ORTHO05D006277 2.2e-126 456.4 426 70.2
Lj9A487G53 Lonicera japonica HOM05D005199 ORTHO05D006277 4.8e-126 455.3 363 66.7
PGR102G3000 Punica granatum HOM05D005199 ORTHO05D006277 4.8e-126 455.3 375 74.4
Lsat_1_v5_gn_4_84380 Lactuca sativa HOM05D005199 ORTHO05D006277 1.8e-125 453.4 430 65.6
THA.LOC104818285 Tarenaya hassleriana HOM05D005199 ORTHO05D006277 4.5e-124 448.7 424 68.6
Aa31LG11G1640 Aethionema arabicum HOM05D005199 ORTHO05D006277 3.8e-123 445.7 393 67.9
MBI10_g44970_MAGBIO Magnolia biondii HOM05D005199 ORTHO05D006277 1.9e-122 443.4 347 81.8
DCAR_016338 Daucus carota HOM05D005199 ORTHO05D006277 3.2e-122 442.6 391 61.9
CARHR275620 Cardamine hirsuta HOM05D005199 ORTHO05D006277 1.0e-120 437.6 408 72.5
Thhalv10005606m.g Eutrema salsugineum HOM05D005199 ORTHO05D006277 1.0e-120 437.6 388 71.9
Carub.0008s2255 Capsella rubella HOM05D005199 ORTHO05D006277 1.4e-120 437.2 417 69.1
BcaC01g02441 Brassica carinata HOM05D005199 ORTHO05D006277 1.8e-120 436.8 411 62.8
Eucgr.K02192 Eucalyptus grandis HOM05D005199 ORTHO05D006277 2.3e-120 436.4 331 72.2
A02p41740 Brassica napus HOM05D005199 ORTHO05D006277 5.2e-120 435.3 414 73.7
BcaC03g18101 Brassica carinata HOM05D005199 ORTHO05D006277 6.8e-120 434.9 414 73.9
C02p61660 Brassica napus HOM05D005199 ORTHO05D006277 6.8e-120 434.9 414 73.9
Sp2g25050 Schrenkiella parvula HOM05D005199 ORTHO05D006277 8.8e-120 434.5 419 63.5
BcaB07g29818 Brassica carinata HOM05D005199 ORTHO05D006277 2.0e-119 433.3 392 72.2
Sc22g0003300 Simmondsia chinensis HOM05D005199 ORTHO05D006277 5.7e-119 431.8 474 61.6
C03p65260 Brassica napus HOM05D005199 ORTHO05D006277 9.7e-119 431.0 415 62.2
BolC3t18779H Brassica oleracea HOM05D005199 ORTHO05D006277 9.7e-119 431.0 415 62.2
AT5G61850 Arabidopsis thaliana HOM05D005199 ORTHO05D006277 1.7e-118 430.3 417 62.6
BcaB02g09607 Brassica carinata HOM05D005199 ORTHO05D006277 1.7e-118 430.3 407 66.8
BraA02t09114Z Brassica rapa HOM05D005199 ORTHO05D006277 2.8e-118 429.5 418 73.0
BolC2t12224H Brassica oleracea HOM05D005199 ORTHO05D006277 3.7e-118 429.1 418 73.2
Sed0007314 Sechium edule HOM05D005199 ORTHO05D006277 4.8e-118 428.7 357 70.6
AL8G38620 Arabidopsis lyrata HOM05D005199 ORTHO05D006277 8.3e-118 427.9 419 70.9
A06p28520 Brassica napus HOM05D005199 ORTHO05D006277 2.4e-117 426.4 417 62.1
BraA06t25798Z Brassica rapa HOM05D005199 ORTHO05D006277 2.4e-117 426.4 417 62.1
unitig_0.g1099 Utricularia gibba HOM05D005199 ORTHO05D006277 9.1e-117 424.5 312 75.3
AUR62032216 Chenopodium quinoa HOM05D005199 ORTHO05D006277 1.2e-116 424.1 359 64.1
EL10Ac5g11279 Beta vulgaris HOM05D005199 ORTHO05D006277 2.7e-116 422.9 413 57.1
unitig_61.g26224 Utricularia gibba HOM05D005199 ORTHO05D006277 7.7e-116 421.4 289 86.9
arahy.Tifrunner.gnm1.ann1.33WSUR Arachis hypogaea HOM05D005199 ORTHO05D006277 3.2e-114 416.0 376 63.0
TPR.G25958 Trifolium pratense HOM05D005199 ORTHO05D006277 5.5e-114 415.2 332 75.6
PSO478G1920 Papaver somniferum HOM05D005199 ORTHO05D006277 1.6e-113 413.7 330 75.5
arahy.Tifrunner.gnm1.ann1.31D2RV Arachis hypogaea HOM05D005199 ORTHO05D006277 3.6e-113 412.5 376 61.4
ATR0582G251 Amborella trichopoda HOM05D005199 ORTHO05D006277 1.4e-112 410.6 410 64.6
Ah.02g114560 Amaranthus hybridus HOM05D005199 ORTHO05D006277 4.0e-112 409.1 374 66.0
FvH4_3g04170 Fragaria vesca HOM05D005199 ORTHO05D006277 2.0e-111 406.8 411 65.0
FvH4_3g03530 Fragaria vesca HOM05D005199 ORTHO05D006277 5.7e-111 405.2 401 63.8
FAN11G0489 Fragaria x ananassa HOM05D005199 ORTHO05D006277 5.7e-111 405.2 401 63.1
FAN11G0779 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.3e-110 404.1 409 64.8
Aqoxy5G03105 Aquilegia oxysepala HOM05D005199 ORTHO05D006277 1.6e-108 397.1 406 62.1
FAN21G1800 Fragaria x ananassa HOM05D005199 ORTHO05D006277 2.3e-107 393.3 401 61.3
FAN25G0693 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.5e-106 390.6 425 62.1
SGA_v2.0_scaffold168G38552 Striga asiatica HOM05D005199 ORTHO05D006277 9.5e-106 387.9 343 58.9
Zm00001eb430240 Zea mays HOM05D005199 ORTHO05D006277 3.1e-96 356.3 392 56.6
Os04g0598300 Oryza sativa ssp. japonica HOM05D005199 ORTHO05D006277 7.5e-95 351.7 342 69.0
SEGI_03714 Sequoiadendron giganteum HOM05D005199 ORTHO05D006277 2.4e-93 346.7 382 51.3
AUR62044212 Chenopodium quinoa HOM05D005199 ORTHO05D006277 1.0e-91 341.3 439 49.4
AUR62043310 Chenopodium quinoa HOM05D005199 ORTHO05D006277 8.6e-91 338.2 359 55.4
Zm00001eb071990 Zea mays HOM05D005199 ORTHO05D006277 2.1e-89 333.6 370 59.5
Mapoly0113s0034 Marchantia polymorpha HOM05D005199 ORTHO05D006277 8.9e-88 328.2 347 49.6
SEGI_00497 Sequoiadendron giganteum HOM05D005199 ORTHO05D006277 1.2e-84 317.8 329 50.8
Migut.D01179 Erythranthe guttata HOM05D005199 ORTHO05D006277 3.5e-84 316.2 180 81.1
Lalb_Chr11g0069151 Lupinus albus HOM05D005199 ORTHO05D006277 7.8e-84 315.1 159 89.9
Pp3c3_11670 Physcomitrium patens HOM05D005199 ORTHO05D006277 1.6e-81 307.4 338 48.5
HPP92_021614 Vanilla planifolia HOM05D005199 ORTHO05D006277 1.1e-80 304.7 363 57.6
Pp3c13_8760 Physcomitrium patens HOM05D005199 ORTHO05D006277 2.2e-78 297.0 312 50.3
Lalb_Chr07g0183841 Lupinus albus HOM05D005199 ORTHO05D006277 1.1e-77 294.7 281 73.3
Lalb_Chr12g0202561 Lupinus albus HOM05D005199 ORTHO05D006277 1.6e-76 290.8 277 75.8
FvH4_5g09660 Fragaria vesca HOM05D005199 ORTHO05D006277 1.1e-72 278.1 290 76.9
Glyma.04G202002 Glycine max HOM05D005199 ORTHO05D006277 8.7e-67 258.5 142 88.0
PGSC0003DMG400014174 Solanum tuberosum HOM05D005199 ORTHO05D006277 2.1e-60 237.3 124 90.3
Sabra15G0071900 Salix brachista HOM05D005199 ORTHO05D006277 4.6e-60 236.1 273 53.5
Actinidia18295 Actinidia chinensis HOM05D005199 ORTHO05D006277 5.6e-58 229.2 158 77.8
Lalb_Chr07g0183831 Lupinus albus HOM05D005199 ORTHO05D006277 2.1e-52 210.7 104 91.3
SMO347G0183 Selaginella moellendorffii HOM05D005199 ORTHO05D006277 4.5e-47 193.0 113 75.2
FAN25G1078 Fragaria x ananassa HOM05D005199 ORTHO05D006277 3.2e-45 186.8 173 55.5
CBR_g60061 Chara braunii HOM05D005199 ORTHO05D006277 9.3e-45 185.3 327 36.7
Lalb_Chr12g0202551 Lupinus albus HOM05D005199 ORTHO05D006277 8.2e-41 172.2 94 85.1
Lalb_Chr11g0069141 Lupinus albus HOM05D005199 ORTHO05D006277 1.3e-38 164.9 150 61.3
AagrBONN_evm.TU.Sc2ySwM_228.2166 Anthoceros agrestis HOM05D005199 ORTHO05D006277 5.3e-32 142.9 260 35.4
CANSAT11G1658 Cannabis sativa HOM05D005199 ORTHO05D006277 9.7e-26 122.1 76 80.3
SMO347G0146 Selaginella moellendorffii HOM05D005199 ORTHO05D006277 1.7e-14 84.7 83 45.8
CDE05G0289 Ceratophyllum demersum HOM05D000263 ORTHO05D000213 2.5e-13 80.9 38 92.1


User provided reference genes

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