Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0050323 Camellia sinensis var. sinensis HOM05D001826 ORTHO05D017545 3.4e-53 211.5 111 100.0
CSS0020146 Camellia sinensis var. sinensis HOM05D001826 ORTHO05D017545 3.1e-30 135.2 104 75.0
CSS0033315 Camellia sinensis var. sinensis HOM05D001826 ORTHO05D017545 1.5e-29 132.9 104 76.0
CSS0000841 Camellia sinensis var. sinensis HOM05D001826 ORTHO05D017545 2.9e-28 128.6 104 74.0
CSS0021518 Camellia sinensis var. sinensis HOM05D001826 ORTHO05D004184 1.6e-18 96.3 64 79.7
Hma1.2p1_0033F.1_g020380 Hydrangea macrophylla HOM05D001826 ORTHO05D004184 1.3e-17 93.2 62 77.4
vmacro13307 Vaccinium macrocarpon HOM05D001826 ORTHO05D004184 5.1e-17 91.3 63 74.6
Actinidia20930 Actinidia chinensis HOM05D001826 ORTHO05D004184 9.7e-16 87.0 63 74.6
ClCG05G001700 Citrullus lanatus HOM05D001826 ORTHO05D004184 9.7e-16 87.0 63 73.0
MELO3C006129.2 Cucumis melo HOM05D001826 ORTHO05D004184 9.7e-16 87.0 63 73.0
CsaV3_3G009090 Cucumis sativus L. HOM05D001826 ORTHO05D004184 9.7e-16 87.0 63 73.0
Lj7A516T61 Lonicera japonica HOM05D001826 ORTHO05D004184 9.7e-16 87.0 63 71.4
CSS0017008 Camellia sinensis var. sinensis HOM05D001826 ORTHO05D004184 1.3e-15 86.7 63 71.4
CSS0033058 Camellia sinensis var. sinensis HOM05D001826 ORTHO05D004184 1.3e-15 86.7 63 71.4
MSTRG.20812 Avicennia marina HOM05D001826 ORTHO05D004184 2.2e-15 85.9 63 69.8
Actinidia12714 Actinidia chinensis HOM05D001826 ORTHO05D004184 3.7e-15 85.1 63 68.3
AUR62004319 Chenopodium quinoa HOM05D001826 ORTHO05D004184 3.7e-15 85.1 63 69.8
Sed0024442 Sechium edule HOM05D001826 ORTHO05D004184 3.7e-15 85.1 63 73.0
ECA236G3271 Erigeron canadensis HOM05D001826 ORTHO05D004184 4.8e-15 84.7 63 69.8
Sabra14G0058600 Salix brachista HOM05D001826 ORTHO05D004184 4.8e-15 84.7 63 68.3
Sed0005198 Sechium edule HOM05D001826 ORTHO05D004184 6.3e-15 84.3 63 69.8
Ah.05g176450 Amaranthus hybridus HOM05D001826 ORTHO05D004184 8.2e-15 84.0 63 68.3
AUR62033325 Chenopodium quinoa HOM05D001826 ORTHO05D004184 1.1e-14 83.6 63 69.8
AUR62033334 Chenopodium quinoa HOM05D001826 ORTHO05D004184 1.1e-14 83.6 63 69.8
HanXRQChr03g0093471 Helianthus annuus HOM05D001826 ORTHO05D004184 1.1e-14 83.6 63 68.3
HanXRQChr04g0121631 Helianthus annuus HOM05D001826 ORTHO05D004184 1.1e-14 83.6 63 69.8
Actinidia33431 Actinidia chinensis HOM05D001826 ORTHO05D004184 1.4e-14 83.2 63 66.7
PGSC0003DMG400000153 Solanum tuberosum HOM05D001826 ORTHO05D004184 1.4e-14 83.2 63 66.7
HanXRQChr06g0169881 Helianthus annuus HOM05D001826 ORTHO05D004184 1.8e-14 82.8 63 69.8
vmacro20955 Vaccinium macrocarpon HOM05D001826 ORTHO05D004184 1.8e-14 82.8 63 71.4
Manes.05G037400 Manihot esculenta HOM05D001826 ORTHO05D004184 2.4e-14 82.4 63 68.3
Hma1.2p1_0001F.1_g001660 Hydrangea macrophylla HOM05D001826 ORTHO05D004184 3.1e-14 82.0 63 65.1
Dinv32449 Davidia involucrata HOM05D001826 ORTHO05D004184 4.1e-14 81.6 63 73.0
Oeu014675.3 Olea europaea HOM05D001826 ORTHO05D004184 5.3e-14 81.3 63 65.1
Potri.014G080800 Populus trichocarpa HOM05D001826 ORTHO05D004184 5.3e-14 81.3 63 65.1
Rhsim07G0018000 Rhododendron simsii HOM05D001826 ORTHO05D004184 5.3e-14 81.3 63 65.1
TWI23G0863 Tripterygium wilfordii HOM05D001826 ORTHO05D004184 5.3e-14 81.3 63 69.8
GSVIVG01026846001 Vitis vinifera HOM05D001826 ORTHO05D004184 5.3e-14 81.3 63 69.8
TWI59G0720 Tripterygium wilfordii HOM05D001826 ORTHO05D004184 6.9e-14 80.9 63 69.8
TWI59G1454 Tripterygium wilfordii HOM05D001826 ORTHO05D004184 6.9e-14 80.9 63 69.8
Nn6g33530 Nelumbo nucifera HOM05D001826 ORTHO05D004184 9.0e-14 80.5 63 65.1
CDE06G1001 Ceratophyllum demersum HOM05D001826 ORTHO05D004184 1.2e-13 80.1 63 68.3
Hund16940 Selenicereus undatus HOM05D001826 ORTHO05D004184 1.2e-13 80.1 64 68.8
Ciclev10018563m.g Citrus clementina HOM05D001826 ORTHO05D004184 1.5e-13 79.7 63 65.1
ECA240G3725 Erigeron canadensis HOM05D001826 ORTHO05D004184 2.0e-13 79.3 63 65.1
HanXRQChr13g0426341 Helianthus annuus HOM05D001826 ORTHO05D004184 2.0e-13 79.3 63 63.5
Lalb_Chr10g0097211 Lupinus albus HOM05D001826 ORTHO05D004184 2.0e-13 79.3 63 68.3
Peaxi162Scf00397g00111 Petunia axillaris HOM05D001826 ORTHO05D004184 2.0e-13 79.3 63 63.5
Solyc01g094290.3 Solanum lycopersicum HOM05D001826 ORTHO05D004184 2.0e-13 79.3 63 66.7
Sopen01g038090 Solanum pennellii HOM05D001826 ORTHO05D004184 2.0e-13 79.3 63 66.7
Potri.002G157200 Populus trichocarpa HOM05D001826 ORTHO05D004184 2.6e-13 79.0 63 65.1
Lj1g0018622 Lotus japonicus HOM05D001826 ORTHO05D004184 3.4e-13 78.6 63 66.7
Nitab4.5_0001620g0100 Nicotiana tabacum HOM05D001826 ORTHO05D004184 3.4e-13 78.6 63 63.5
Prupe.2G162700 Prunus persica HOM05D001826 ORTHO05D004184 3.4e-13 78.6 63 65.1
arahy.Tifrunner.gnm1.ann1.8F4Z70 Arachis hypogaea HOM05D001826 ORTHO05D004184 4.5e-13 78.2 63 66.7
arahy.Tifrunner.gnm1.ann1.SLD8LW Arachis hypogaea HOM05D001826 ORTHO05D004184 4.5e-13 78.2 63 66.7
CiPaw.01G057800 Carya illinoinensis HOM05D001826 ORTHO05D004184 4.5e-13 78.2 65 61.5
DCAR_006915 Daucus carota HOM05D001826 ORTHO05D004184 4.5e-13 78.2 63 63.5
Duzib138G1216 Durio zibethinus HOM05D001826 ORTHO05D004184 4.5e-13 78.2 63 63.5
PGR042G0308 Punica granatum HOM05D001826 ORTHO05D004184 4.5e-13 78.2 63 63.5
QL08p049532 Quercus lobata HOM05D001826 ORTHO05D004184 4.5e-13 78.2 63 63.5
Hund27301 Selenicereus undatus HOM05D001826 ORTHO05D004184 4.5e-13 78.2 62 66.1
MSTRG.4866 Avicennia marina HOM05D001826 ORTHO05D004184 5.9e-13 77.8 62 62.9
CAN.G78.31 Capsicum annuum HOM05D001826 ORTHO05D004184 5.9e-13 77.8 63 63.5
Lalb_Chr19g0127041 Lupinus albus HOM05D001826 ORTHO05D004184 5.9e-13 77.8 63 63.5
MD01G1053700 Malus domestica HOM05D001826 ORTHO05D004184 5.9e-13 77.8 63 61.9
Nitab4.5_0003111g0100 Nicotiana tabacum HOM05D001826 ORTHO05D004184 5.9e-13 77.8 63 61.9
Lsat_1_v5_gn_3_136621 Lactuca sativa HOM05D001826 ORTHO05D004184 7.6e-13 77.4 63 63.5
SalBow5G0163 Salvia bowleyana HOM05D001826 ORTHO05D004184 7.6e-13 77.4 63 66.7
SalBow5G2532 Salvia bowleyana HOM05D001826 ORTHO05D004184 7.6e-13 77.4 63 66.7
Duzib133G0016 Durio zibethinus HOM05D001826 ORTHO05D004184 1.0e-12 77.0 63 63.5
FvH4_7g13660 Fragaria vesca HOM05D001826 ORTHO05D004184 1.0e-12 77.0 63 63.5
FAN03G3317 Fragaria x ananassa HOM05D001826 ORTHO05D004184 1.0e-12 77.0 63 63.5
TPR.G4440 Trifolium pratense HOM05D001826 ORTHO05D004184 1.0e-12 77.0 65 63.1
EL10Ac1g00529 Beta vulgaris HOM05D001826 ORTHO05D004184 1.3e-12 76.6 63 65.1
DCAR_015945 Daucus carota HOM05D001826 ORTHO05D004184 1.3e-12 76.6 63 65.1
Nn1g01431 Nelumbo nucifera HOM05D001826 ORTHO05D017545 1.3e-12 76.6 60 66.7
TAR374G0698 Trochodendron aralioides HOM05D001826 ORTHO05D017545 1.3e-12 76.6 62 64.5
Cpa.g.sc18.224 Carica papaya HOM05D001826 ORTHO05D004184 2.2e-12 75.9 63 66.7
MD07G1141400 Malus domestica HOM05D001826 ORTHO05D004184 2.2e-12 75.9 63 61.9
Aa31LG1G11160 Aethionema arabicum HOM05D001826 ORTHO05D004184 2.9e-12 75.5 63 63.5
Aqoxy5G04023 Aquilegia oxysepala HOM05D001826 ORTHO05D004184 2.9e-12 75.5 63 63.5
Carub.0006s3656 Capsella rubella HOM05D001826 ORTHO05D004184 2.9e-12 75.5 65 66.2
DCAR_008601 Daucus carota HOM05D001826 ORTHO05D004184 2.9e-12 75.5 63 61.9
Migut.B01724 Erythranthe guttata HOM05D001826 ORTHO05D004184 2.9e-12 75.5 64 65.6
FAN01G1586 Fragaria x ananassa HOM05D001826 ORTHO05D004184 2.9e-12 75.5 64 64.1
Lsat_1_v5_gn_7_5161 Lactuca sativa HOM05D001826 ORTHO05D004184 5.0e-12 74.7 66 66.7
Medtr8g031550 Medicago truncatula HOM05D001826 ORTHO05D004184 5.0e-12 74.7 64 62.5
TAR375G0082 Trochodendron aralioides HOM05D001826 ORTHO05D004184 5.0e-12 74.7 62 62.9
Ca_23666_v3 Cicer arietinum L. HOM05D001826 ORTHO05D004184 6.5e-12 74.3 64 60.9
Sabra02G0124800 Salix brachista HOM05D001826 ORTHO05D004184 6.5e-12 74.3 63 60.3
Thecc.01G363300 Theobroma cacao HOM05D001826 ORTHO05D004184 6.5e-12 74.3 63 61.9
Eucgr.E00180 Eucalyptus grandis HOM05D001826 ORTHO05D004184 8.5e-12 73.9 63 60.3
Lj9C580G11 Lonicera japonica HOM05D001826 ORTHO05D004184 8.5e-12 73.9 63 58.7
A10p00230 Brassica napus HOM05D001826 ORTHO05D004184 1.1e-11 73.6 61 63.9
C05p00260 Brassica napus HOM05D001826 ORTHO05D004184 1.1e-11 73.6 61 63.9
BolC5t28815H Brassica oleracea HOM05D001826 ORTHO05D004184 1.1e-11 73.6 61 63.9
BraA10t42302Z Brassica rapa HOM05D001826 ORTHO05D004184 1.1e-11 73.6 61 63.9
AL1G10550 Arabidopsis lyrata HOM05D001826 ORTHO05D004184 1.9e-11 72.8 64 65.6
AT1G01790 Arabidopsis thaliana HOM05D001826 ORTHO05D004184 1.9e-11 72.8 64 65.6
BcaB03g13616 Brassica carinata HOM05D001826 ORTHO05D004184 1.9e-11 72.8 61 63.9
Cc02_g37680 Coffea canephora HOM05D001826 ORTHO05D004184 1.9e-11 72.8 63 60.3
DCAR_025143 Daucus carota HOM05D001826 ORTHO05D004184 1.9e-11 72.8 63 63.5
Phvul.008G067800 Phaseolus vulgaris HOM05D001826 ORTHO05D004184 1.9e-11 72.8 65 58.5
SGA_v2.0_scaffold277G46674 Striga asiatica HOM05D001826 ORTHO05D004184 1.9e-11 72.8 65 60.0
ATR0680G345 Amborella trichopoda HOM05D001826 ORTHO05D004184 2.5e-11 72.4 63 65.1
Glyma.09G262000 Glycine max HOM05D001826 ORTHO05D004184 2.5e-11 72.4 65 60.0
Gohir.D12G108900 Gossypium hirsutum HOM05D001826 ORTHO05D004184 2.5e-11 72.4 60 61.7
Gorai.008G118000 Gossypium raimondii HOM05D001826 ORTHO05D004184 2.5e-11 72.4 60 61.7
Thhalv10006595m.g Eutrema salsugineum HOM05D001826 ORTHO05D004184 3.2e-11 72.0 61 62.3
Thhalv10006607m.g Eutrema salsugineum HOM05D001826 ORTHO05D004184 3.2e-11 72.0 61 62.3
Glyma.18G230100 Glycine max HOM05D001826 ORTHO05D004184 3.2e-11 72.0 65 60.0
RcHm_v2.0_Chr1g0353741 Rosa chinensis HOM05D001826 ORTHO05D004184 3.2e-11 72.0 63 60.3
Sp1g00490 Schrenkiella parvula HOM05D001826 ORTHO05D004184 4.2e-11 71.6 61 60.7
Gohir.A12G105000 Gossypium hirsutum HOM05D001826 ORTHO05D004184 5.5e-11 71.2 60 61.7
Ca_07891_v3 Cicer arietinum L. HOM05D001826 ORTHO05D004184 7.2e-11 70.9 65 61.5
PSO063G0747 Papaver somniferum HOM05D001826 ORTHO05D004184 7.2e-11 70.9 63 60.3
PSO782G0182 Papaver somniferum HOM05D001826 ORTHO05D004184 7.2e-11 70.9 63 60.3
arahy.Tifrunner.gnm1.ann1.253UZ6 Arachis hypogaea HOM05D001826 ORTHO05D004184 9.4e-11 70.5 65 60.0
arahy.Tifrunner.gnm1.ann1.42EX8Y Arachis hypogaea HOM05D001826 ORTHO05D004184 9.4e-11 70.5 65 60.0
CANSAT56G1923 Cannabis sativa HOM05D001826 ORTHO05D004184 9.4e-11 70.5 64 59.4
Glyma.03G014000 Glycine max HOM05D001826 ORTHO05D004184 1.2e-10 70.1 63 58.7
Glyma.07G073700 Glycine max HOM05D001826 ORTHO05D004184 1.2e-10 70.1 63 58.7
CARHR000530 Cardamine hirsuta HOM05D001826 ORTHO05D004184 1.6e-10 69.7 61 63.9
A10p00260 Brassica napus HOM05D001826 ORTHO05D004184 2.1e-10 69.3 61 62.3
C05p00270 Brassica napus HOM05D001826 ORTHO05D004184 2.1e-10 69.3 61 62.3
BolC5t28817H Brassica oleracea HOM05D001826 ORTHO05D004184 2.1e-10 69.3 61 62.3
THA.LOC104801451 Tarenaya hassleriana HOM05D001826 ORTHO05D004184 2.1e-10 69.3 67 61.2
MBI17_g08175_MAGBIO Magnolia biondii HOM05D005566 ORTHO05D004184 3.6e-10 68.6 59 66.1
Medtr7g076700 Medicago truncatula HOM05D001826 ORTHO05D004184 4.6e-10 68.2 65 60.0
VMungo1383G3314 Vigna mungo HOM05D001826 ORTHO05D004184 7.9e-10 67.4 68 55.9
BcaB03g13615 Brassica carinata HOM05D001826 ORTHO05D004184 1.0e-09 67.0 61 60.7
Psat3g110880 Pisum sativum HOM05D001826 ORTHO05D004184 1.4e-09 66.6 65 58.5
TPR.G37729 Trifolium pratense HOM05D001826 ORTHO05D004184 1.4e-09 66.6 65 58.5
Sp1g00500 Schrenkiella parvula HOM05D001826 ORTHO05D004184 1.8e-09 66.2 61 62.3
HPP92_020862 Vanilla planifolia HOM05D001826 ORTHO05D004184 1.8e-09 66.2 63 57.1
Aa31LG5G380 Aethionema arabicum HOM05D001826 ORTHO05D004184 2.3e-09 65.9 64 59.4
Lj3g0020333 Lotus japonicus HOM05D001826 ORTHO05D004184 2.3e-09 65.9 61 60.7
Psat4g153760 Pisum sativum HOM05D001826 ORTHO05D004184 2.3e-09 65.9 54 66.7
SalBow3G1103 Salvia bowleyana HOM05D001826 ORTHO05D004184 2.3e-09 65.9 63 55.6
Carub.0001s0042 Capsella rubella HOM05D001826 ORTHO05D004184 3.9e-09 65.1 62 62.9
CiPaw.02G028500 Carya illinoinensis HOM05D001826 ORTHO05D004184 5.1e-09 64.7 64 56.2
COL.COLO4_12675 Corchorus olitorius HOM05D001826 ORTHO05D004184 8.8e-09 63.9 63 58.7
BraA09t42264Z Brassica rapa HOM05D001826 ORTHO05D004184 1.1e-08 63.5 62 56.5
AL6G52810 Arabidopsis lyrata HOM05D001826 ORTHO05D004184 5.7e-08 61.2 64 57.8
VMungo0331G1572 Vigna mungo HOM05D001826 ORTHO05D004184 5.7e-08 61.2 61 54.1
AT4G00630 Arabidopsis thaliana HOM05D001826 ORTHO05D004184 7.4e-08 60.8 64 57.8
C08p53870 Brassica napus HOM05D001826 ORTHO05D004184 7.4e-08 60.8 62 54.8
Atru.chr5.450 Acer truncatum HOM05D001826 ORTHO05D004184 9.7e-08 60.5 46 67.4
BolC8t52901H Brassica oleracea HOM05D001826 ORTHO05D004184 1.7e-07 59.7 62 54.8
Gohir.D08G151300 Gossypium hirsutum HOM05D001826 ORTHO05D004184 1.7e-07 59.7 68 50.0
Gorai.004G157200 Gossypium raimondii HOM05D001826 ORTHO05D004184 1.7e-07 59.7 68 50.0
BraA09t42181Z Brassica rapa HOM05D001826 ORTHO05D017545 2.2e-07 59.3 62 54.8
Gohir.A08G130000 Gossypium hirsutum HOM05D001826 ORTHO05D004184 2.2e-07 59.3 68 50.0
BcaC07g42427 Brassica carinata HOM05D001826 ORTHO05D017545 2.8e-07 58.9 90 41.1
Haze_15465 Corylus avellana HOM05D001826 ORTHO05D004184 2.8e-07 58.9 60 58.3
Zm00001eb433980 Zea mays HOM05D001826 ORTHO05D004184 2.8e-07 58.9 63 55.6
Phvul.010G095600 Phaseolus vulgaris HOM05D001826 ORTHO05D004184 5.3e-06 54.7 63 54.0
Phvul.010G095800 Phaseolus vulgaris HOM05D001826 ORTHO05D004184 9.1e-06 53.9 63 52.4


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