Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0050317 Camellia sinensis var. sinensis HOM05D006137 ORTHO05D007697 8.3e-188 660.2 332 100.0
CSS0021967 Camellia sinensis var. sinensis HOM05D006137 ORTHO05D007697 8.9e-174 613.6 307 99.7
Dinv25255 Davidia involucrata HOM05D006137 ORTHO05D007697 3.5e-154 548.5 303 87.8
Rhsim11G0021000 Rhododendron simsii HOM05D006137 ORTHO05D007697 6.9e-142 507.7 321 79.1
RcHm_v2.0_Chr7g0211741 Rosa chinensis HOM05D006137 ORTHO05D007697 4.9e-140 501.5 312 77.6
TAR629G2895 Trochodendron aralioides HOM05D006137 ORTHO05D007697 8.4e-140 500.7 303 79.9
FAN08G1929 Fragaria x ananassa HOM05D006137 ORTHO05D007697 3.2e-139 498.8 303 78.5
Hma1.2p1_1027F.1_g249480 Hydrangea macrophylla HOM05D006137 ORTHO05D007697 7.1e-139 497.7 303 78.5
FvH4_5g23010 Fragaria vesca HOM05D006137 ORTHO05D007697 3.5e-138 495.4 303 78.2
FAN18G2668 Fragaria x ananassa HOM05D006137 ORTHO05D007697 3.5e-138 495.4 303 78.2
Gorai.008G224300 Gossypium raimondii HOM05D006137 ORTHO05D007697 1.0e-137 493.8 304 76.3
FAN04G0555 Fragaria x ananassa HOM05D006137 ORTHO05D007697 1.3e-137 493.4 303 77.2
Gohir.D12G208800 Gossypium hirsutum HOM05D006137 ORTHO05D007697 2.3e-137 492.7 304 75.7
MD06G1026400 Malus domestica HOM05D006137 ORTHO05D007697 1.1e-136 490.3 315 74.6
Gohir.A12G206400 Gossypium hirsutum HOM05D006137 ORTHO05D007697 2.5e-136 489.2 304 75.7
GSVIVG01013108001 Vitis vinifera HOM05D006137 ORTHO05D007697 3.6e-135 485.3 309 76.1
FvH4_2g06760 Fragaria vesca HOM05D006137 ORTHO05D007697 1.1e-134 483.8 303 76.9
Nn3g19394 Nelumbo nucifera HOM05D006137 ORTHO05D007697 1.8e-134 483.0 317 74.8
FAN13G2862 Fragaria x ananassa HOM05D006137 ORTHO05D007697 5.3e-134 481.5 320 73.4
Thecc.03G309800 Theobroma cacao HOM05D006137 ORTHO05D007697 1.5e-133 479.9 297 77.4
Ciclev10001458m.g Citrus clementina HOM05D006137 ORTHO05D007697 3.4e-133 478.8 313 74.1
Duzib068G1414 Durio zibethinus HOM05D006137 ORTHO05D007697 4.5e-133 478.4 307 75.2
FAN18G2637 Fragaria x ananassa HOM05D006137 ORTHO05D007697 7.6e-133 477.6 338 70.1
Atru.chr6.1520 Acer truncatum HOM05D006137 ORTHO05D007697 9.9e-133 477.2 303 75.6
CiPaw.11G098100 Carya illinoinensis HOM05D006137 ORTHO05D007697 2.9e-132 475.7 301 76.7
COL.COLO4_16947 Corchorus olitorius HOM05D006137 ORTHO05D007697 3.8e-132 475.3 307 73.9
Potri.003G096600 Populus trichocarpa HOM05D006137 ORTHO05D007697 1.1e-131 473.8 296 77.7
TWI15G1160 Tripterygium wilfordii HOM05D006137 ORTHO05D007697 5.4e-131 471.5 296 75.7
Sabra03G0065200 Salix brachista HOM05D006137 ORTHO05D007697 2.7e-130 469.2 296 76.0
arahy.Tifrunner.gnm1.ann1.3JZK2J Arachis hypogaea HOM05D006137 ORTHO05D007697 7.9e-130 467.6 302 73.2
arahy.Tifrunner.gnm1.ann1.J91B8N Arachis hypogaea HOM05D006137 ORTHO05D007697 7.9e-130 467.6 302 73.2
Peaxi162Scf00170g00615 Petunia axillaris HOM05D006137 ORTHO05D007697 1.8e-129 466.5 307 73.3
vmacro08163 Vaccinium macrocarpon HOM05D006137 ORTHO05D007697 2.3e-129 466.1 271 84.5
Cc08_g03270 Coffea canephora HOM05D006137 ORTHO05D007697 3.9e-129 465.3 307 73.3
VMungo1215G0535 Vigna mungo HOM05D006137 ORTHO05D007697 3.9e-129 465.3 311 72.0
DCAR_008226 Daucus carota HOM05D006137 ORTHO05D007697 5.1e-129 464.9 304 74.7
Nitab4.5_0002190g0020 Nicotiana tabacum HOM05D006137 ORTHO05D007697 1.1e-128 463.8 306 72.9
Aqoxy2G03876 Aquilegia oxysepala HOM05D006137 ORTHO05D007697 3.3e-128 462.2 298 70.8
Lalb_Chr09g0325501 Lupinus albus HOM05D006137 ORTHO05D007697 1.6e-127 459.9 302 73.2
TPR.G19427 Trifolium pratense HOM05D006137 ORTHO05D007697 1.6e-127 459.9 302 72.5
PGR042G0393 Punica granatum HOM05D006137 ORTHO05D007697 2.1e-127 459.5 312 71.8
MELO3C013825.2 Cucumis melo HOM05D006137 ORTHO05D007697 2.8e-127 459.1 299 72.6
Solyc08g076410.4 Solanum lycopersicum HOM05D006137 ORTHO05D007697 4.8e-127 458.4 307 72.6
Sopen08g024990 Solanum pennellii HOM05D006137 ORTHO05D007697 4.8e-127 458.4 307 72.6
Lj3g0008594 Lotus japonicus HOM05D006137 ORTHO05D007697 6.2e-127 458.0 302 71.5
EL10Ac2g03238 Beta vulgaris HOM05D006137 ORTHO05D007697 1.4e-126 456.8 300 73.0
Glyma.01G014900 Glycine max HOM05D006137 ORTHO05D007697 1.4e-126 456.8 312 70.5
CsaV3_3G001380 Cucumis sativus L. HOM05D006137 ORTHO05D007697 1.8e-126 456.4 299 71.9
Phvul.002G137400 Phaseolus vulgaris HOM05D006137 ORTHO05D007697 1.8e-126 456.4 314 69.7
PGSC0003DMG400014792 Solanum tuberosum HOM05D006137 ORTHO05D007697 2.4e-126 456.1 307 72.3
HanXRQChr04g0098961 Helianthus annuus HOM05D006137 ORTHO05D007697 5.3e-126 454.9 299 73.2
ECA233G6209 Erigeron canadensis HOM05D006137 ORTHO05D007697 6.9e-126 454.5 298 72.5
Medtr5g029550 Medicago truncatula HOM05D006137 ORTHO05D007697 9.0e-126 454.1 299 71.9
Oeu017078.1 Olea europaea HOM05D006137 ORTHO05D007697 1.5e-125 453.4 307 71.0
CAN.G726.20 Capsicum annuum HOM05D006137 ORTHO05D007697 3.4e-125 452.2 302 71.5
AT2G35500 Arabidopsis thaliana HOM05D006137 ORTHO05D007697 5.8e-125 451.4 297 72.1
AL4G31550 Arabidopsis lyrata HOM05D006137 ORTHO05D007697 1.7e-124 449.9 307 70.0
Carub.0004s1719 Capsella rubella HOM05D006137 ORTHO05D007697 2.2e-124 449.5 307 70.0
Thhalv10016768m.g Eutrema salsugineum HOM05D006137 ORTHO05D007697 3.8e-124 448.7 307 70.0
A04p26930 Brassica napus HOM05D006137 ORTHO05D007697 1.4e-123 446.8 307 69.4
C04p64320 Brassica napus HOM05D006137 ORTHO05D007697 1.4e-123 446.8 307 69.4
BraA04t18192Z Brassica rapa HOM05D006137 ORTHO05D007697 2.4e-123 446.0 307 69.4
CANSAT21G0809 Cannabis sativa HOM05D006137 ORTHO05D007697 2.4e-123 446.0 316 69.0
BcaB06g28845 Brassica carinata HOM05D006137 ORTHO05D007697 3.2e-123 445.7 307 69.1
BcaC02g07708 Brassica carinata HOM05D006137 ORTHO05D007697 4.2e-123 445.3 308 69.2
CANSAT21G0548 Cannabis sativa HOM05D006137 ORTHO05D007697 7.1e-123 444.5 316 69.0
CARHR129650 Cardamine hirsuta HOM05D006137 ORTHO05D007697 7.1e-123 444.5 297 71.0
BolC4t27919H Brassica oleracea HOM05D006137 ORTHO05D007697 2.1e-122 443.0 307 69.1
Sp4g17720 Schrenkiella parvula HOM05D006137 ORTHO05D007697 6.0e-122 441.4 295 70.8
ClCG10G001310 Citrullus lanatus HOM05D006137 ORTHO05D007697 2.3e-121 439.5 356 62.1
PSO782G3150 Papaver somniferum HOM05D006137 ORTHO05D007697 1.1e-120 437.2 310 67.4
PSO063G4597 Papaver somniferum HOM05D006137 ORTHO05D007697 5.6e-120 434.9 297 69.0
Psat2g138120 Pisum sativum HOM05D006137 ORTHO05D007697 5.6e-120 434.9 300 69.7
Sed0022354 Sechium edule HOM05D006137 ORTHO05D007697 4.0e-118 428.7 296 68.9
Nitab4.5_0003416g0030 Nicotiana tabacum HOM05D006137 ORTHO05D007697 2.6e-117 426.0 307 68.1
Ah.09g233490 Amaranthus hybridus HOM05D006137 ORTHO05D007697 7.6e-117 424.5 303 67.3
Lsat_1_v5_gn_6_3681 Lactuca sativa HOM05D006137 ORTHO05D007697 1.7e-116 423.3 311 67.8
Sc24g0002950 Simmondsia chinensis HOM05D006137 ORTHO05D007697 3.8e-116 422.2 271 74.5
MSTRG.24846 Avicennia marina HOM05D006137 ORTHO05D007697 6.5e-116 421.4 306 67.0
CDE06G2536 Ceratophyllum demersum HOM05D006137 ORTHO05D007697 8.4e-116 421.0 322 64.6
FAN24G0436 Fragaria x ananassa HOM05D006137 ORTHO05D007697 1.9e-115 419.9 276 74.3
Aa31LG9G15490 Aethionema arabicum HOM05D006137 ORTHO05D007697 1.6e-114 416.8 271 72.3
QL12p001513 Quercus lobata HOM05D006137 ORTHO05D007697 4.6e-114 415.2 288 71.5
HPP92_014848 Vanilla planifolia HOM05D006137 ORTHO05D007697 6.7e-113 411.4 300 65.7
THA.LOC104814417 Tarenaya hassleriana HOM05D006137 ORTHO05D007697 1.1e-112 410.6 307 66.1
Migut.A01172 Erythranthe guttata HOM05D006137 ORTHO05D007697 1.6e-111 406.8 303 69.0
Prupe.5G028300 Prunus persica HOM05D006137 ORTHO05D007697 1.6e-111 406.8 303 67.3
Eucgr.E00233 Eucalyptus grandis HOM05D006137 ORTHO05D007697 4.5e-109 398.7 293 66.2
unitig_748.g7545 Utricularia gibba HOM05D006137 ORTHO05D007697 1.3e-108 397.1 296 65.9
Os10g0577700 Oryza sativa ssp. japonica HOM05D006137 ORTHO05D007697 3.8e-108 395.6 297 62.0
Lj2A232T29 Lonicera japonica HOM05D006137 ORTHO05D007697 1.9e-107 393.3 326 64.1
ATR0829G218 Amborella trichopoda HOM05D006137 ORTHO05D007697 7.4e-104 381.3 277 66.8
Oeu019613.1 Olea europaea HOM05D006137 ORTHO05D007697 4.1e-102 375.6 287 65.5
SGA_v2.0_scaffold36G14297 Striga asiatica HOM05D006137 ORTHO05D007697 1.4e-99 367.1 278 64.4
Zm00001eb025030 Zea mays HOM05D006137 ORTHO05D007697 1.4e-99 367.1 297 58.6
Oeu002327.1 Olea europaea HOM05D006137 ORTHO05D007697 5.1e-97 358.6 225 75.6
FAN20G1935 Fragaria x ananassa HOM05D006137 ORTHO05D007697 5.7e-96 355.1 315 60.3
Oeu019614.1 Olea europaea HOM05D006137 ORTHO05D007697 7.4e-96 354.8 287 62.7
SEGI_14560 Sequoiadendron giganteum HOM05D006137 ORTHO05D007697 2.2e-92 343.2 305 55.7
Haze_08142 Corylus avellana HOM05D006137 ORTHO05D007697 7.4e-88 328.2 458 44.3
Eucgr.E00231 Eucalyptus grandis HOM05D006137 ORTHO05D007697 7.7e-85 318.2 267 60.7
Mapoly0006s0263 Marchantia polymorpha HOM05D006137 ORTHO05D007697 5.0e-84 315.5 324 47.2
SMO228G0118 Selaginella moellendorffii HOM05D006137 ORTHO05D007697 2.9e-76 289.7 302 46.4
AagrBONN_evm.TU.Sc2ySwM_344.1996 Anthoceros agrestis HOM05D006137 ORTHO05D007697 6.5e-76 288.5 300 47.7
Pp3c12_17740 Physcomitrium patens HOM05D006137 ORTHO05D007697 7.2e-75 285.0 304 44.7
Manes.15G185701 Manihot esculenta HOM05D006137 ORTHO05D007697 1.7e-68 263.8 170 75.3
Hund09822 Selenicereus undatus HOM05D006137 ORTHO05D007697 5.2e-65 252.3 153 77.8
Ca_25185_v3 Cicer arietinum L. HOM05D006137 ORTHO05D007697 1.2e-61 241.1 180 65.0
AUR62002644 Chenopodium quinoa HOM05D006137 ORTHO05D007697 1.3e-60 237.7 202 58.9
Oeu033557.2 Olea europaea HOM05D006137 ORTHO05D007697 1.9e-54 217.2 162 67.9
C03p78000 Brassica napus HOM05D006137 ORTHO05D007697 3.1e-49 199.9 164 60.4
BolC1t02019H Brassica oleracea HOM05D006137 ORTHO05D007697 3.2e-46 189.9 169 58.6
Hund09821 Selenicereus undatus HOM05D006137 ORTHO05D000006 1.3e-44 184.5 129 66.7
C01p20920 Brassica napus HOM05D006137 ORTHO05D007697 4.7e-42 176.0 174 53.4
BolC3t20061H Brassica oleracea HOM05D006137 ORTHO05D007697 4.7e-42 176.0 174 52.3
AUR62040998 Chenopodium quinoa HOM05D006137 ORTHO05D007697 4.7e-42 176.0 128 64.1
AUR62002645 Chenopodium quinoa HOM05D006137 ORTHO05D007697 8.1e-42 175.3 126 64.3
CBR_g18978 Chara braunii HOM05D006137 ORTHO05D007697 7.3e-35 152.1 180 47.2
Glyma.07G152633 Glycine max HOM05D006137 ORTHO05D007697 1.6e-34 151.0 112 65.2
MCO11G470 Micromonas commoda HOM05D006137 ORTHO05D007697 4.0e-33 146.4 205 36.6
AUR62040999 Chenopodium quinoa HOM05D006137 ORTHO05D007697 1.0e-28 131.7 89 69.7
Medtr1g009450 Medicago truncatula HOM05D006137 ORTHO05D007697 1.1e-27 128.3 126 54.0
PRCOL_00002339 Prasinoderma coloniale HOM05D006137 ORTHO05D007697 1.4e-22 111.3 199 32.2
C02p41610 Brassica napus HOM05D006137 ORTHO05D007697 4.3e-11 73.2 46 71.7
BolC2t10179H Brassica oleracea HOM05D006137 ORTHO05D007697 4.3e-11 73.2 46 71.7
BcaC09g50780 Brassica carinata HOM05D006137 ORTHO05D007697 7.4e-11 72.4 99 44.4
BolC2t11174H Brassica oleracea HOM05D006137 ORTHO05D007697 9.0e-09 65.5 31 83.9
Cre16.g659850 Chlamydomonas reinhardtii HOM05D006137 ORTHO05D007697 1.2e-08 65.1 209 25.4
Mapoly0089s0033 Marchantia polymorpha HOM05D002058 ORTHO05D003758 2.9e-07 60.5 108 35.2
MCO12G135 Micromonas commoda HOM05D002058 ORTHO05D003758 1.1e-06 58.5 194 23.7
Mapoly0035s0139 Marchantia polymorpha HOM05D002058 ORTHO05D003758 5.5e-06 56.2 148 27.7
SEGI_36463 Sequoiadendron giganteum HOM05D002058 ORTHO05D009216 9.3e-06 55.5 105 30.5


User provided reference genes

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