Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0050297 Camellia sinensis var. sinensis HOM05D006304 ORTHO05D008584 0.0e+00 1102.0 547 100.0
Dinv38671 Davidia involucrata HOM05D006304 ORTHO05D008584 6.8e-171 604.7 618 58.9
Actinidia34979 Actinidia chinensis HOM05D006304 ORTHO05D008584 3.2e-160 569.3 585 57.8
Actinidia19056 Actinidia chinensis HOM05D006304 ORTHO05D008584 4.7e-156 555.4 586 56.0
Rhsim12G0159100 Rhododendron simsii HOM05D006304 ORTHO05D008584 1.9e-149 533.5 564 55.5
vmacro16566 Vaccinium macrocarpon HOM05D006304 ORTHO05D008584 1.3e-142 510.8 616 52.3
TAR371G0034 Trochodendron aralioides HOM05D006304 ORTHO05D008584 7.4e-125 451.8 567 48.7
TAR629G0077 Trochodendron aralioides HOM05D006304 ORTHO05D008584 1.5e-122 444.1 549 49.2
Lj5A115T69 Lonicera japonica HOM05D006304 ORTHO05D008584 7.6e-122 441.8 588 48.6
Cfa018983 Carpinus fangiana HOM05D006304 ORTHO05D008584 1.4e-120 437.6 577 47.8
CiPaw.11G039300 Carya illinoinensis HOM05D006304 ORTHO05D008584 1.9e-120 437.2 570 47.9
Prupe.5G187100 Prunus persica HOM05D006304 ORTHO05D008584 2.3e-118 430.3 423 56.7
GSVIVG01008051001 Vitis vinifera HOM05D006304 ORTHO05D008584 2.1e-116 423.7 445 54.8
MD14G1195600 Malus domestica HOM05D006304 ORTHO05D008584 1.8e-115 420.6 418 54.8
MD06G1188800 Malus domestica HOM05D006304 ORTHO05D008584 4.5e-114 416.0 428 54.4
Cc04_g15450 Coffea canephora HOM05D006304 ORTHO05D008584 1.0e-110 404.8 323 65.9
Nn3g17140 Nelumbo nucifera HOM05D006304 ORTHO05D008584 1.6e-108 397.5 439 53.1
arahy.Tifrunner.gnm1.ann1.E16Z9R Arachis hypogaea HOM05D006304 ORTHO05D008584 2.1e-108 397.1 420 55.0
FAN04G3159 Fragaria x ananassa HOM05D006304 ORTHO05D008584 3.7e-108 396.4 431 52.9
MBI12_g19403_MAGBIO Magnolia biondii HOM05D006304 ORTHO05D008584 1.2e-106 391.3 429 53.6
Oeu048746.1 Olea europaea HOM05D006304 ORTHO05D008584 1.5e-106 391.0 443 52.1
FvH4_5g15410 Fragaria vesca HOM05D006304 ORTHO05D008584 2.0e-106 390.6 434 53.2
FAN08G3028 Fragaria x ananassa HOM05D006304 ORTHO05D008584 1.0e-105 388.3 434 52.3
Sc10g0009990 Simmondsia chinensis HOM05D006304 ORTHO05D008584 5.0e-105 386.0 392 56.4
VMungo1215G2961 Vigna mungo HOM05D006304 ORTHO05D008584 1.1e-104 384.8 408 54.7
CANSAT80G1066 Cannabis sativa HOM05D006304 ORTHO05D008584 1.4e-104 384.4 310 64.5
Phvul.003G192300 Phaseolus vulgaris HOM05D006304 ORTHO05D008584 1.2e-103 381.3 303 65.0
CAN.G628.40 Capsicum annuum HOM05D006304 ORTHO05D008584 2.1e-103 380.6 411 54.7
Medtr4g107890 Medicago truncatula HOM05D006304 ORTHO05D008584 4.6e-103 379.4 320 61.9
Nitab4.5_0000269g0180 Nicotiana tabacum HOM05D006304 ORTHO05D008584 8.7e-102 375.2 453 51.2
FAN18G3228 Fragaria x ananassa HOM05D006304 ORTHO05D008584 1.1e-101 374.8 469 49.5
Psat4g053720 Pisum sativum HOM05D006304 ORTHO05D008584 1.1e-101 374.8 314 62.7
Nitab4.5_0009895g0010 Nicotiana tabacum HOM05D006304 ORTHO05D008584 2.5e-101 373.6 385 56.1
EL10Ac5g10949 Beta vulgaris HOM05D006304 ORTHO05D008584 3.3e-101 373.2 596 44.3
DCAR_021535 Daucus carota HOM05D006304 ORTHO05D008584 5.7e-101 372.5 499 48.1
CsaV3_1G007890 Cucumis sativus L. HOM05D006304 ORTHO05D008584 1.3e-100 371.3 364 57.4
MELO3C002204.2 Cucumis melo HOM05D006304 ORTHO05D008584 1.6e-100 370.9 364 57.7
Cpa.g.sc17.206 Carica papaya HOM05D006304 ORTHO05D008584 2.8e-100 370.2 446 50.7
Migut.I00131 Erythranthe guttata HOM05D006304 ORTHO05D008584 6.3e-100 369.0 391 55.0
Ca_21844_v3 Cicer arietinum L. HOM05D006304 ORTHO05D008584 1.1e-99 368.2 316 61.7
Sopen06g027340 Solanum pennellii HOM05D006304 ORTHO05D008584 1.1e-99 368.2 530 45.3
Ciclev10019215m.g Citrus clementina HOM05D006304 ORTHO05D008584 3.1e-99 366.7 306 64.4
Duzib205G0644 Durio zibethinus HOM05D006304 ORTHO05D008584 3.1e-99 366.7 306 64.4
RcHm_v2.0_Chr7g0180671 Rosa chinensis HOM05D006304 ORTHO05D008584 3.1e-99 366.7 452 50.9
Manes.06G096000 Manihot esculenta HOM05D006304 ORTHO05D008584 1.0e-97 361.7 295 64.7
Haze_07372 Corylus avellana HOM05D006304 ORTHO05D008584 1.3e-97 361.3 577 43.8
Lj4g0004911 Lotus japonicus HOM05D006304 ORTHO05D008584 1.7e-97 360.9 372 54.6
Atru.chr9.2307 Acer truncatum HOM05D006304 ORTHO05D008584 2.2e-97 360.5 315 62.5
SalBow5G3794 Salvia bowleyana HOM05D006304 ORTHO05D008584 2.2e-97 360.5 435 49.2
AUR62021733 Chenopodium quinoa HOM05D006304 ORTHO05D008584 3.8e-97 359.8 476 48.1
AUR62008366 Chenopodium quinoa HOM05D006304 ORTHO05D008584 8.5e-97 358.6 430 50.0
Glyma.17G097500 Glycine max HOM05D006304 ORTHO05D008584 1.9e-96 357.5 278 63.7
ECA247G4106 Erigeron canadensis HOM05D006304 ORTHO05D008584 2.5e-96 357.1 234 71.8
Hund09367 Selenicereus undatus HOM05D006304 ORTHO05D008584 3.2e-96 356.7 583 42.5
TPR.G38415 Trifolium pratense HOM05D006304 ORTHO05D008584 9.4e-96 355.1 322 59.9
HanXRQChr02g0045271 Helianthus annuus HOM05D006304 ORTHO05D008584 3.6e-95 353.2 285 64.2
Gohir.A12G175370 Gossypium hirsutum HOM05D006304 ORTHO05D008584 4.6e-95 352.8 403 53.3
Gorai.008G191000 Gossypium raimondii HOM05D006304 ORTHO05D008584 4.6e-95 352.8 394 53.3
PGR083G1524 Punica granatum HOM05D006304 ORTHO05D008584 4.6e-95 352.8 287 62.4
Gohir.D12G178452 Gossypium hirsutum HOM05D006304 ORTHO05D008584 1.0e-94 351.7 396 53.5
Thecc.03G080300 Theobroma cacao HOM05D006304 ORTHO05D008584 5.1e-94 349.4 394 52.8
TWI60G1649 Tripterygium wilfordii HOM05D006304 ORTHO05D008584 8.8e-94 348.6 428 50.2
arahy.Tifrunner.gnm1.ann1.YQHF2A Arachis hypogaea HOM05D006304 ORTHO05D008584 1.1e-93 348.2 508 44.7
Ah.11g048730 Amaranthus hybridus HOM05D006304 ORTHO05D008584 1.5e-93 347.8 537 44.7
Glyma.05G029400 Glycine max HOM05D006304 ORTHO05D008584 1.3e-92 344.7 394 52.3
Sabra15G0090300 Salix brachista HOM05D006304 ORTHO05D008584 1.7e-92 344.4 274 64.2
FAN13G0685 Fragaria x ananassa HOM05D006304 ORTHO05D008584 4.8e-92 342.8 434 49.1
Sed0028137 Sechium edule HOM05D006304 ORTHO05D008584 1.1e-91 341.7 431 49.7
Potri.015G064600 Populus trichocarpa HOM05D006304 ORTHO05D008584 1.4e-91 341.3 274 63.5
Sp2g25930 Schrenkiella parvula HOM05D006304 ORTHO05D008584 1.4e-91 341.3 299 61.5
QL10p015696 Quercus lobata HOM05D006304 ORTHO05D008584 6.9e-91 339.0 522 44.8
Aqoxy3G00750 Aquilegia oxysepala HOM05D006304 ORTHO05D008584 1.5e-90 337.8 198 81.3
SGA_v2.0_scaffold56G20049 Striga asiatica HOM05D006304 ORTHO05D008584 4.5e-90 336.3 298 61.4
Lalb_Chr12g0196741 Lupinus albus HOM05D006304 ORTHO05D008584 1.0e-89 335.1 197 79.2
ATR1120G178 Amborella trichopoda HOM05D006304 ORTHO05D008584 2.9e-89 333.6 413 48.4
Thhalv10003777m.g Eutrema salsugineum HOM05D006304 ORTHO05D008584 6.5e-89 332.4 302 59.3
THA.LOC104821457 Tarenaya hassleriana HOM05D006304 ORTHO05D008584 8.5e-89 332.0 299 60.2
BcaB02g09690 Brassica carinata HOM05D006304 ORTHO05D008584 5.5e-88 329.3 201 77.6
Eucgr.B00434 Eucalyptus grandis HOM05D006304 ORTHO05D008584 5.5e-88 329.3 374 52.1
CDE06G1311 Ceratophyllum demersum HOM05D006304 ORTHO05D008584 1.2e-87 328.2 531 42.7
Peaxi162Scf00013g00025 Petunia axillaris HOM05D006304 ORTHO05D008584 1.2e-87 328.2 409 50.6
AT5G62760 Arabidopsis thaliana HOM05D006304 ORTHO05D008584 2.1e-87 327.4 299 59.2
BcaC01g02519 Brassica carinata HOM05D006304 ORTHO05D008584 2.1e-87 327.4 232 70.3
A06p29540 Brassica napus HOM05D006304 ORTHO05D008584 2.1e-87 327.4 203 76.8
C03p63960 Brassica napus HOM05D006304 ORTHO05D008584 4.7e-87 326.2 233 70.4
AL8G39730 Arabidopsis lyrata HOM05D006304 ORTHO05D008584 6.1e-87 325.9 302 57.9
CARHR276550 Cardamine hirsuta HOM05D006304 ORTHO05D008584 5.2e-86 322.8 299 57.9
Lsat_1_v5_gn_1_10941 Lactuca sativa HOM05D006304 ORTHO05D008584 2.6e-85 320.5 321 56.1
COL.COLO4_05911 Corchorus olitorius HOM05D006304 ORTHO05D008584 4.4e-85 319.7 218 73.4
unitig_0.g2536 Utricularia gibba HOM05D006304 ORTHO05D008584 4.4e-85 319.7 278 61.5
HPP92_021789 Vanilla planifolia HOM05D006304 ORTHO05D008584 7.4e-85 318.9 460 45.7
Solyc06g071040.4 Solanum lycopersicum HOM05D006304 ORTHO05D008584 9.7e-85 318.5 530 42.3
Carub.0008s2349 Capsella rubella HOM05D006304 ORTHO05D008584 1.7e-84 317.8 300 56.7
SEGI_29067 Sequoiadendron giganteum HOM05D006304 ORTHO05D008584 6.3e-84 315.8 277 59.2
Os02g0215000 Oryza sativa ssp. japonica HOM05D006304 ORTHO05D008584 1.1e-83 315.1 302 58.6
BraA06t25899Z Brassica rapa HOM05D006304 ORTHO05D008584 2.4e-83 313.9 227 68.7
Aa31LG11G920 Aethionema arabicum HOM05D006304 ORTHO05D008584 3.1e-83 313.5 227 68.7
PSO017G6991 Papaver somniferum HOM05D006304 ORTHO05D008584 7.7e-82 308.9 507 42.4
Zm00001eb240230 Zea mays HOM05D006304 ORTHO05D008584 7.7e-82 308.9 301 57.1
BolC3t18650H Brassica oleracea HOM05D006304 ORTHO05D008584 1.3e-81 308.1 260 62.7
ClCG01G014430 Citrullus lanatus HOM05D006304 ORTHO05D008584 3.3e-77 293.5 603 38.0
Mapoly0068s0038 Marchantia polymorpha HOM05D006304 ORTHO05D008584 1.8e-75 287.7 198 70.2
CBR_g5693 Chara braunii HOM05D006304 ORTHO05D008584 2.9e-65 253.8 202 60.4
Oeu006477.2 Olea europaea HOM05D006304 ORTHO05D008584 5.9e-50 203.0 335 40.9
PGSC0003DMG402033036 Solanum tuberosum HOM05D006304 ORTHO05D008584 3.0e-49 200.7 436 36.9
Duzib084G0195 Durio zibethinus HOM05D006304 ORTHO05D008584 1.2e-42 178.7 169 58.0
Actinidia28212 Actinidia chinensis HOM05D006304 ORTHO05D008584 4.0e-38 163.7 146 56.8
Cre14.g629400 Chlamydomonas reinhardtii HOM05D006304 ORTHO05D008584 5.8e-37 159.8 202 41.1
QL10p015692 Quercus lobata HOM05D006304 ORTHO05D008584 1.5e-21 108.6 64 78.1


User provided reference genes

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