Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0050293 Camellia sinensis var. sinensis HOM05D039899 ORTHO05D113295 6.6e-35 150.2 79 100.0
CSS0035952 Camellia sinensis var. sinensis HOM05D039899 ORTHO05D110467 1.7e-30 135.6 79 92.4
CSS0049126 Camellia sinensis var. sinensis HOM05D039899 ORTHO05D111112 1.4e-29 132.5 79 92.4
CSS0036031 Camellia sinensis var. sinensis HOM05D000825 ORTHO05D003462 3.4e-07 58.2 65 56.9
Lj3A1064T101 Lonicera japonica HOM05D000825 ORTHO05D003462 3.4e-07 58.2 65 56.9
Cc11_g16580 Coffea canephora HOM05D000825 ORTHO05D003462 7.6e-07 57.0 65 55.4
Rhsim12G0035300 Rhododendron simsii HOM05D000825 ORTHO05D003462 7.6e-07 57.0 65 55.4
Rhsim12G0105500 Rhododendron simsii HOM05D000825 ORTHO05D003462 7.6e-07 57.0 65 55.4
Prupe.5G154900 Prunus persica HOM05D000825 ORTHO05D003462 9.9e-07 56.6 43 72.1
CSS0007515 Camellia sinensis var. sinensis HOM05D000825 ORTHO05D003462 1.3e-06 56.2 65 53.8
CSS0016665 Camellia sinensis var. sinensis HOM05D000825 ORTHO05D003462 1.3e-06 56.2 65 53.8
vmacro01087 Vaccinium macrocarpon HOM05D000825 ORTHO05D003462 1.3e-06 56.2 32 90.6
Actinidia08089 Actinidia chinensis HOM05D000825 ORTHO05D003462 1.7e-06 55.8 40 75.0
Oeu041688.5 Olea europaea HOM05D000825 ORTHO05D003462 1.7e-06 55.8 65 55.4
Prupe.1G233400 Prunus persica HOM05D000825 ORTHO05D003462 1.7e-06 55.8 65 55.4
vmacro16135 Vaccinium macrocarpon HOM05D000825 ORTHO05D003462 1.7e-06 55.8 65 53.8
MD13G1112000 Malus domestica HOM05D000825 ORTHO05D003462 2.2e-06 55.5 65 55.4
Actinidia30677 Actinidia chinensis HOM05D000825 ORTHO05D003462 2.9e-06 55.1 65 53.8
Manes.13G015500 Manihot esculenta HOM05D000825 ORTHO05D003462 2.9e-06 55.1 65 52.3
Oeu038668.1 Olea europaea HOM05D000825 ORTHO05D003462 2.9e-06 55.1 65 55.4
Sabra10G0049100 Salix brachista HOM05D000825 ORTHO05D003462 2.9e-06 55.1 65 53.8
arahy.Tifrunner.gnm1.ann1.40PBNN Arachis hypogaea HOM05D000825 ORTHO05D003462 3.8e-06 54.7 65 55.4
arahy.Tifrunner.gnm1.ann1.C6G01Q Arachis hypogaea HOM05D000825 ORTHO05D003462 3.8e-06 54.7 65 55.4
arahy.Tifrunner.gnm1.ann1.PBD1JU Arachis hypogaea HOM05D000825 ORTHO05D003462 3.8e-06 54.7 65 55.4
Lj6g0005936 Lotus japonicus HOM05D000825 ORTHO05D003462 3.8e-06 54.7 65 55.4
Potri.010G056100 Populus trichocarpa HOM05D000825 ORTHO05D003462 3.8e-06 54.7 65 53.8
CiPaw.06G099600 Carya illinoinensis HOM05D000825 ORTHO05D003462 4.9e-06 54.3 65 53.8
AUR62025864 Chenopodium quinoa HOM05D000825 ORTHO05D003462 4.9e-06 54.3 67 50.7
Dinv11101 Davidia involucrata HOM05D000825 ORTHO05D003462 4.9e-06 54.3 65 53.8
Migut.K00696 Erythranthe guttata HOM05D000825 ORTHO05D003462 4.9e-06 54.3 65 53.8
MD16G1111600 Malus domestica HOM05D000825 ORTHO05D003462 4.9e-06 54.3 65 53.8
TWI36G1132 Tripterygium wilfordii HOM05D000825 ORTHO05D003462 4.9e-06 54.3 65 53.8
Cfa009313 Carpinus fangiana HOM05D000825 ORTHO05D003462 6.4e-06 53.9 65 53.8
Haze_12367 Corylus avellana HOM05D000825 ORTHO05D003462 6.4e-06 53.9 65 53.8
Duzib248G1423 Durio zibethinus HOM05D000825 ORTHO05D003462 6.4e-06 53.9 65 53.8
Duzib268G0933 Durio zibethinus HOM05D000825 ORTHO05D003462 6.4e-06 53.9 65 53.8
Lalb_Chr07g0187311 Lupinus albus HOM05D000825 ORTHO05D003462 6.4e-06 53.9 65 53.8
Lalb_Chr23g0277951 Lupinus albus HOM05D000825 ORTHO05D003462 6.4e-06 53.9 65 53.8
Manes.12G014900 Manihot esculenta HOM05D000825 ORTHO05D003462 6.4e-06 53.9 65 53.8
Nn3g16546 Nelumbo nucifera HOM05D000825 ORTHO05D003462 6.4e-06 53.9 65 53.8
Nn4g22413 Nelumbo nucifera HOM05D000825 ORTHO05D003462 6.4e-06 53.9 65 53.8
Ca_16484_v3 Cicer arietinum L. HOM05D000825 ORTHO05D003462 8.4e-06 53.5 65 55.4
COL.COLO4_23619 Corchorus olitorius HOM05D000825 ORTHO05D003462 8.4e-06 53.5 65 52.3
Duzib251G0887 Durio zibethinus HOM05D000825 ORTHO05D003462 8.4e-06 53.5 65 53.8
Duzib268G0854 Durio zibethinus HOM05D000825 ORTHO05D003462 8.4e-06 53.5 65 53.8
Glyma.11G248000 Glycine max HOM05D000825 ORTHO05D003462 8.4e-06 53.5 65 53.8
Glyma.18G009200 Glycine max HOM05D000825 ORTHO05D003462 8.4e-06 53.5 65 53.8
Gohir.D12G151800 Gossypium hirsutum HOM05D000825 ORTHO05D003462 8.4e-06 53.5 65 53.8
Gorai.008G164200 Gossypium raimondii HOM05D000825 ORTHO05D003462 8.4e-06 53.5 65 53.8
Manes.16G048001 Manihot esculenta HOM05D000825 ORTHO05D003462 8.4e-06 53.5 65 52.3
Phvul.001G259400 Phaseolus vulgaris HOM05D000825 ORTHO05D003462 8.4e-06 53.5 65 53.8
Rhsim12G0172600 Rhododendron simsii HOM05D000825 ORTHO05D003462 8.4e-06 53.5 66 51.5
Sabra08G0136400 Salix brachista HOM05D000825 ORTHO05D003462 8.4e-06 53.5 65 52.3
vmacro16653 Vaccinium macrocarpon HOM05D000825 ORTHO05D003462 8.4e-06 53.5 66 51.5
vmacro16661 Vaccinium macrocarpon HOM05D000825 ORTHO05D003462 8.4e-06 53.5 66 51.5
vmacro16715 Vaccinium macrocarpon HOM05D000825 ORTHO05D003462 8.4e-06 53.5 66 51.5
VMungo1383G2063 Vigna mungo HOM05D000825 ORTHO05D003462 8.4e-06 53.5 65 53.8


User provided reference genes

Program Settings