Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0050251 Camellia sinensis var. sinensis HOM05D006977 ORTHO05D008738 2.3e-102 375.6 191 100.0
Actinidia25872 Actinidia chinensis HOM05D006977 ORTHO05D008738 2.4e-70 269.2 188 75.0
Dinv12080 Davidia involucrata HOM05D006977 ORTHO05D008738 2.0e-69 266.2 186 74.7
Rhsim01G0293500 Rhododendron simsii HOM05D006977 ORTHO05D008738 1.3e-60 236.9 181 68.0
Haze_05149 Corylus avellana HOM05D006977 ORTHO05D008738 9.3e-59 230.7 187 67.4
Cfa004914 Carpinus fangiana HOM05D006977 ORTHO05D008738 2.1e-58 229.6 184 67.9
QL05p057365 Quercus lobata HOM05D006977 ORTHO05D008738 2.7e-58 229.2 182 67.6
Hma1.2p1_0484F.1_g162990 Hydrangea macrophylla HOM05D006977 ORTHO05D008738 2.5e-56 222.6 208 59.6
vmacro15094 Vaccinium macrocarpon HOM05D006977 ORTHO05D008738 4.8e-55 218.4 189 64.0
Cc04_g01560 Coffea canephora HOM05D006977 ORTHO05D008738 2.4e-54 216.1 178 61.2
GSVIVG01028248001 Vitis vinifera HOM05D006977 ORTHO05D008738 5.3e-54 214.9 187 58.3
Prupe.3G002600 Prunus persica HOM05D006977 ORTHO05D008738 2.0e-53 213.0 164 66.5
Thecc.01G325400 Theobroma cacao HOM05D006977 ORTHO05D008738 2.6e-53 212.6 175 65.1
ECA236G2063 Erigeron canadensis HOM05D006977 ORTHO05D008738 4.5e-53 211.8 188 59.0
CiPaw.08G082500 Carya illinoinensis HOM05D006977 ORTHO05D008738 7.6e-53 211.1 183 62.3
MBI19_g30288_MAGBIO Magnolia biondii HOM05D006977 ORTHO05D008738 4.9e-52 208.4 155 69.7
Nn4g24845 Nelumbo nucifera HOM05D006977 ORTHO05D008738 6.5e-52 208.0 179 62.0
Atru.chr5.861 Acer truncatum HOM05D006977 ORTHO05D008738 8.4e-52 207.6 168 66.7
Ca_17328_v3 Cicer arietinum L. HOM05D006977 ORTHO05D008738 1.9e-51 206.5 180 60.6
Cpa.g.sc112.76 Carica papaya HOM05D006977 ORTHO05D008738 2.5e-51 206.1 178 62.4
Cpa.g.sc57.16 Carica papaya HOM05D006977 ORTHO05D008738 2.5e-51 206.1 179 60.9
Ciclev10022352m.g Citrus clementina HOM05D006977 ORTHO05D008738 5.5e-51 204.9 182 60.4
Manes.05G008900 Manihot esculenta HOM05D006977 ORTHO05D008738 6.0e-50 201.4 189 60.3
MSTRG.6995 Avicennia marina HOM05D006977 ORTHO05D008738 1.3e-49 200.3 190 54.2
HanXRQChr15g0493961 Helianthus annuus HOM05D006977 ORTHO05D008738 1.3e-49 200.3 186 57.5
Duzib133G0680 Durio zibethinus HOM05D006977 ORTHO05D008738 2.3e-49 199.5 164 63.4
Sabra14G0082500 Salix brachista HOM05D006977 ORTHO05D008738 2.3e-49 199.5 163 62.6
TWI81G0461 Tripterygium wilfordii HOM05D006977 ORTHO05D008738 3.9e-49 198.7 157 65.6
Migut.M01655 Erythranthe guttata HOM05D006977 ORTHO05D008738 5.1e-49 198.4 184 58.7
COL.COLO4_23128 Corchorus olitorius HOM05D006977 ORTHO05D008738 1.5e-48 196.8 174 60.9
Potri.014G112200 Populus trichocarpa HOM05D006977 ORTHO05D008738 1.5e-48 196.8 187 58.8
TAR362G0624 Trochodendron aralioides HOM05D006977 ORTHO05D008738 1.5e-48 196.8 186 59.7
RcHm_v2.0_Chr3g0485771 Rosa chinensis HOM05D006977 ORTHO05D008738 1.9e-48 196.4 170 61.2
Glyma.04G053700 Glycine max HOM05D006977 ORTHO05D008738 3.3e-48 195.7 180 57.2
Lalb_Chr11g0071671 Lupinus albus HOM05D006977 ORTHO05D008738 3.3e-48 195.7 175 59.4
Lsat_1_v5_gn_7_107761 Lactuca sativa HOM05D006977 ORTHO05D008738 4.3e-48 195.3 187 57.8
VMungo0720G2811 Vigna mungo HOM05D006977 ORTHO05D008738 5.7e-48 194.9 180 57.8
FAN23G2129 Fragaria x ananassa HOM05D006977 ORTHO05D008738 9.6e-48 194.1 176 58.5
PSO357G0421 Papaver somniferum HOM05D006977 ORTHO05D008738 9.6e-48 194.1 184 55.4
Gohir.D11G109500 Gossypium hirsutum HOM05D006977 ORTHO05D008738 1.3e-47 193.7 178 57.9
Gorai.007G117100 Gossypium raimondii HOM05D006977 ORTHO05D008738 1.3e-47 193.7 178 57.9
DCAR_012297 Daucus carota HOM05D006977 ORTHO05D008738 2.1e-47 193.0 184 57.1
Lj5g0006261 Lotus japonicus HOM05D006977 ORTHO05D008738 2.8e-47 192.6 182 57.7
PSO170G4516 Papaver somniferum HOM05D006977 ORTHO05D008738 2.8e-47 192.6 184 53.8
FAN19G2776 Fragaria x ananassa HOM05D006977 ORTHO05D008738 4.8e-47 191.8 174 58.0
Glyma.10G137900 Glycine max HOM05D006977 ORTHO05D008738 1.1e-46 190.7 180 56.7
MD09G1290400 Malus domestica HOM05D006977 ORTHO05D008738 1.1e-46 190.7 179 57.5
Eucgr.A01003 Eucalyptus grandis HOM05D006977 ORTHO05D008738 1.4e-46 190.3 185 56.8
Gohir.A11G104700 Gossypium hirsutum HOM05D006977 ORTHO05D008738 2.4e-46 189.5 178 56.2
FAN26G0658 Fragaria x ananassa HOM05D006977 ORTHO05D008738 3.1e-46 189.1 176 57.4
Medtr8g103265 Medicago truncatula HOM05D006977 ORTHO05D008738 3.1e-46 189.1 157 63.7
PGR042G1466 Punica granatum HOM05D006977 ORTHO05D008738 5.3e-46 188.3 182 56.0
Phvul.L002843 Phaseolus vulgaris HOM05D006977 ORTHO05D008738 1.2e-45 187.2 178 55.1
Psat7g015240 Pisum sativum HOM05D006977 ORTHO05D008738 7.6e-45 184.5 180 55.6
Duzib268G1723 Durio zibethinus HOM05D006977 ORTHO05D008738 1.3e-44 183.7 181 56.4
FAN28G2841 Fragaria x ananassa HOM05D006977 ORTHO05D008738 3.8e-44 182.2 190 55.3
PGSC0003DMG400001120 Solanum tuberosum HOM05D006977 ORTHO05D008738 3.8e-44 182.2 157 61.8
Lj1A7G42 Lonicera japonica HOM05D006977 ORTHO05D008738 6.5e-44 181.4 127 71.7
Solyc01g080830.3 Solanum lycopersicum HOM05D006977 ORTHO05D008738 5.5e-43 178.3 157 61.1
Oeu031543.1 Olea europaea HOM05D006977 ORTHO05D008738 7.2e-43 177.9 183 52.5
arahy.Tifrunner.gnm1.ann1.KP3I1I Arachis hypogaea HOM05D006977 ORTHO05D008738 1.6e-42 176.8 151 62.3
HPP92_012764 Vanilla planifolia HOM05D006977 ORTHO05D008738 1.6e-42 176.8 179 51.4
CiPaw.07G125600 Carya illinoinensis HOM05D006977 ORTHO05D008738 2.1e-42 176.4 184 58.2
Sopen01g030650 Solanum pennellii HOM05D006977 ORTHO05D008738 2.7e-42 176.0 157 60.5
Duzib268G1378 Durio zibethinus HOM05D006977 ORTHO05D008738 6.1e-42 174.9 148 59.5
FvH4_1g26230 Fragaria vesca HOM05D006977 ORTHO05D008738 1.8e-41 173.3 148 59.5
Sc02g0004000 Simmondsia chinensis HOM05D006977 ORTHO05D008738 1.8e-41 173.3 196 46.9
arahy.Tifrunner.gnm1.ann1.PT1J72 Arachis hypogaea HOM05D006977 ORTHO05D008738 3.9e-41 172.2 147 61.9
AUR62007556 Chenopodium quinoa HOM05D006977 ORTHO05D008738 6.7e-41 171.4 187 50.3
AUR62020194 Chenopodium quinoa HOM05D006977 ORTHO05D008738 6.7e-41 171.4 165 52.1
Aqoxy5G02822 Aquilegia oxysepala HOM05D006977 ORTHO05D008738 8.7e-41 171.0 138 60.9
ClCG01G007180 Citrullus lanatus HOM05D006977 ORTHO05D008738 1.5e-40 170.2 171 54.4
ATR0796G043 Amborella trichopoda HOM05D006977 ORTHO05D008738 4.3e-40 168.7 189 46.6
SalBow5G4120 Salvia bowleyana HOM05D006977 ORTHO05D008738 7.4e-40 167.9 147 59.9
THA.LOC104799825 Tarenaya hassleriana HOM05D006977 ORTHO05D008738 4.8e-39 165.2 158 51.3
Sed0019401 Sechium edule HOM05D006977 ORTHO05D008738 1.1e-38 164.1 176 52.3
CsaV3_5G018620 Cucumis sativus L. HOM05D006977 ORTHO05D008738 1.4e-38 163.7 169 54.4
SGA_v2.0_scaffold204G41642 Striga asiatica HOM05D006977 ORTHO05D008738 1.4e-38 163.7 164 55.5
Hund02455 Selenicereus undatus HOM05D006977 ORTHO05D008738 2.4e-38 162.9 181 44.8
MELO3C005192.2 Cucumis melo HOM05D006977 ORTHO05D008738 1.2e-37 160.6 151 57.0
Duzib268G1823 Durio zibethinus HOM05D006977 ORTHO05D008738 1.7e-36 156.8 148 57.4
Zm00001eb328690 Zea mays HOM05D006977 ORTHO05D008738 2.2e-36 156.4 187 43.3
AL6G51510 Arabidopsis lyrata HOM05D006977 ORTHO05D008738 1.1e-35 154.1 158 48.1
Os07g0636400 Oryza sativa ssp. japonica HOM05D006977 ORTHO05D008738 4.2e-35 152.1 151 47.7
Peaxi162Scf00309g00082 Petunia axillaris HOM05D006977 ORTHO05D008738 4.2e-35 152.1 129 61.2
Sp3g31270 Schrenkiella parvula HOM05D006977 ORTHO05D008738 5.5e-35 151.8 158 46.2
SpUn0082_0020 Schrenkiella parvula HOM05D006977 ORTHO05D008738 5.5e-35 151.8 158 46.2
TPR.G23504 Trifolium pratense HOM05D006977 ORTHO05D008738 7.2e-35 151.4 119 63.9
EL10Ac6g15579 Beta vulgaris HOM05D006977 ORTHO05D008738 9.4e-35 151.0 152 52.0
CARHR249760 Cardamine hirsuta HOM05D006977 ORTHO05D008738 1.2e-34 150.6 170 44.1
Carub.0006s3543 Capsella rubella HOM05D006977 ORTHO05D008738 2.7e-34 149.4 156 46.8
CAN.G100.60 Capsicum annuum HOM05D006977 ORTHO05D008738 2.7e-34 149.4 126 62.7
Aa31LG5G1570 Aethionema arabicum HOM05D006977 ORTHO05D008738 7.9e-34 147.9 176 43.8
AT4G01790 Arabidopsis thaliana HOM05D006977 ORTHO05D008738 1.4e-33 147.1 158 46.2
Thhalv10029024m.g Eutrema salsugineum HOM05D006977 ORTHO05D008738 1.8e-33 146.7 170 45.3
BcaC01g06803 Brassica carinata HOM05D006977 ORTHO05D008738 3.0e-33 146.0 151 45.0
C03p38480 Brassica napus HOM05D006977 ORTHO05D008738 3.0e-33 146.0 151 45.0
BolC3t16121H Brassica oleracea HOM05D006977 ORTHO05D008738 3.0e-33 146.0 151 45.0
BcaB01g02378 Brassica carinata HOM05D006977 ORTHO05D008738 6.7e-33 144.8 156 44.2
CANSAT25G0488 Cannabis sativa HOM05D006977 ORTHO05D008738 1.5e-32 143.7 160 52.5
A03p31490 Brassica napus HOM05D006977 ORTHO05D008738 1.7e-31 140.2 151 43.7
BraA03t12329Z Brassica rapa HOM05D006977 ORTHO05D008738 1.7e-31 140.2 151 43.7
Nitab4.5_0003092g0050 Nicotiana tabacum HOM05D006977 ORTHO05D008738 3.1e-30 136.0 120 60.0
unitig_8.g4039 Utricularia gibba HOM05D006977 ORTHO05D008738 6.9e-30 134.8 165 47.3
Nitab4.5_0000222g0410 Nicotiana tabacum HOM05D006977 ORTHO05D008738 1.7e-28 130.2 116 59.5
Sp6g01640 Schrenkiella parvula HOM05D006977 ORTHO05D008738 8.8e-25 117.9 117 45.3
MD17G1285100 Malus domestica HOM05D006977 ORTHO05D008738 3.3e-24 115.9 81 66.7
CDE02G1393 Ceratophyllum demersum HOM05D006977 ORTHO05D008738 2.8e-23 112.8 105 52.4
CDE04G2744 Ceratophyllum demersum HOM05D006977 ORTHO05D008738 2.6e-16 89.7 96 49.0
Mapoly0147s0029 Marchantia polymorpha HOM05D006977 ORTHO05D008738 2.7e-13 79.7 127 37.8
Duzib138G1646 Durio zibethinus HOM05D006977 ORTHO05D008738 2.9e-12 76.3 87 49.4
Pp3c20_22530 Physcomitrium patens HOM05D006977 ORTHO05D008738 2.1e-10 70.1 135 34.1
TWI81G0948 Tripterygium wilfordii HOM05D006977 ORTHO05D008738 2.4e-06 56.6 46 58.7


User provided reference genes

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