Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0050223 Camellia sinensis var. sinensis HOM05D003201 ORTHO05D008914 1.9e-161 572.4 280 100.0
CSS0009288 Camellia sinensis var. sinensis HOM05D003201 ORTHO05D008914 9.5e-161 570.1 280 99.6
Actinidia29333 Actinidia chinensis HOM05D003201 ORTHO05D008914 6.2e-128 461.1 280 82.9
QL12p025722 Quercus lobata HOM05D003201 ORTHO05D008914 1.1e-119 433.7 279 76.3
Rhsim07G0174100 Rhododendron simsii HOM05D003201 ORTHO05D008914 4.9e-117 424.9 374 61.5
Dinv37468 Davidia involucrata HOM05D003201 ORTHO05D008914 1.3e-114 416.8 234 83.8
Manes.02G219100 Manihot esculenta HOM05D003201 ORTHO05D008914 2.9e-109 399.1 279 71.7
MD15G1105100 Malus domestica HOM05D003201 ORTHO05D008914 3.2e-108 395.6 279 71.0
SalBow8G4280 Salvia bowleyana HOM05D003201 ORTHO05D008914 3.2e-108 395.6 279 66.3
DCAR_002183 Daucus carota HOM05D003201 ORTHO05D008914 4.2e-108 395.2 278 69.4
Nitab4.5_0000391g0210 Nicotiana tabacum HOM05D003201 ORTHO05D008914 2.1e-107 392.9 277 69.3
GSVIVG01035604001 Vitis vinifera HOM05D003201 ORTHO05D008914 2.1e-107 392.9 278 70.1
Solyc05g012940.4 Solanum lycopersicum HOM05D003201 ORTHO05D008914 1.0e-106 390.6 278 69.4
Nitab4.5_0012553g0020 Nicotiana tabacum HOM05D003201 ORTHO05D008914 1.8e-106 389.8 277 68.6
Sopen05g007740 Solanum pennellii HOM05D003201 ORTHO05D008914 2.3e-106 389.4 278 69.4
Cc11_g12550 Coffea canephora HOM05D003201 ORTHO05D008914 3.0e-106 389.0 279 67.0
ClCG08G012570 Citrullus lanatus HOM05D003201 ORTHO05D008914 3.9e-106 388.7 281 70.1
CAN.G964.23 Capsicum annuum HOM05D003201 ORTHO05D008914 5.1e-106 388.3 277 69.0
Peaxi162Scf00314g00636 Petunia axillaris HOM05D003201 ORTHO05D008914 5.1e-106 388.3 279 68.8
CiPaw.07G210300 Carya illinoinensis HOM05D003201 ORTHO05D008914 2.5e-105 386.0 281 69.8
Thecc.03G318200 Theobroma cacao HOM05D003201 ORTHO05D008914 5.7e-105 384.8 279 67.7
MELO3C011176.2 Cucumis melo HOM05D003201 ORTHO05D008914 7.4e-105 384.4 280 68.6
Prupe.1G456900 Prunus persica HOM05D003201 ORTHO05D008914 1.6e-104 383.3 279 71.3
PGSC0003DMG402028340 Solanum tuberosum HOM05D003201 ORTHO05D008914 4.8e-104 381.7 278 67.6
SGA_v2.0_scaffold45G16974 Striga asiatica HOM05D003201 ORTHO05D008914 4.8e-104 381.7 277 65.0
FvH4_2g36540 Fragaria vesca HOM05D003201 ORTHO05D008914 1.8e-103 379.8 280 67.5
CsaV3_2G031270 Cucumis sativus L. HOM05D003201 ORTHO05D008914 2.4e-103 379.4 281 68.0
Eucgr.E04307 Eucalyptus grandis HOM05D003201 ORTHO05D008914 3.1e-103 379.0 279 67.7
Gohir.D12G205000 Gossypium hirsutum HOM05D003201 ORTHO05D008914 3.1e-103 379.0 278 66.9
Aqoxy7G00979 Aquilegia oxysepala HOM05D003201 ORTHO05D008914 4.0e-103 378.6 288 67.4
Ciclev10016172m.g Citrus clementina HOM05D003201 ORTHO05D008914 5.3e-103 378.3 278 66.5
Gorai.008G219900 Gossypium raimondii HOM05D003201 ORTHO05D008914 1.2e-102 377.1 279 66.7
Duzib084G1420 Durio zibethinus HOM05D003201 ORTHO05D008914 2.0e-102 376.3 286 67.5
Gohir.A12G202300 Gossypium hirsutum HOM05D003201 ORTHO05D008914 2.6e-102 375.9 278 66.5
RcHm_v2.0_Chr6g0305311 Rosa chinensis HOM05D003201 ORTHO05D008914 4.5e-102 375.2 279 65.9
Migut.E00069 Erythranthe guttata HOM05D003201 ORTHO05D008914 1.0e-101 374.0 281 65.1
Hund03239 Selenicereus undatus HOM05D003201 ORTHO05D008914 1.1e-100 370.5 281 66.9
FAN15G0760 Fragaria x ananassa HOM05D003201 ORTHO05D008914 1.9e-100 369.8 280 66.8
Cpa.g.sc30.52 Carica papaya HOM05D003201 ORTHO05D008914 7.1e-100 367.9 281 63.7
vmacro05085 Vaccinium macrocarpon HOM05D003201 ORTHO05D008914 1.3e-98 363.6 499 45.7
HanXRQChr15g0468831 Helianthus annuus HOM05D003201 ORTHO05D008914 3.9e-98 362.1 279 64.2
CANSAT54G1971 Cannabis sativa HOM05D003201 ORTHO05D008914 1.1e-97 360.5 282 65.2
TWI18G0285 Tripterygium wilfordii HOM05D003201 ORTHO05D008914 8.2e-96 354.4 275 64.7
Glyma.06G078200 Glycine max HOM05D003201 ORTHO05D008914 6.9e-95 351.3 280 60.0
THA.LOC104811993 Tarenaya hassleriana HOM05D003201 ORTHO05D008914 6.9e-95 351.3 278 62.2
TPR.G12401 Trifolium pratense HOM05D003201 ORTHO05D008914 4.5e-94 348.6 278 60.4
AT4G20325 Arabidopsis thaliana HOM05D003201 ORTHO05D008914 5.9e-94 348.2 277 60.3
Psat5g023760 Pisum sativum HOM05D003201 ORTHO05D008914 1.7e-93 346.7 284 60.2
ECA233G2337 Erigeron canadensis HOM05D004148 ORTHO05D004709 2.2e-93 346.3 277 61.7
BcaNung03501 Brassica carinata HOM05D003201 ORTHO05D008914 2.9e-93 345.9 277 60.6
C07p50860 Brassica napus HOM05D000936 ORTHO05D008914 2.9e-93 345.9 277 60.6
AL7G33570 Arabidopsis lyrata HOM05D003201 ORTHO05D008914 3.8e-93 345.5 277 60.6
Aa31LG6G2740 Aethionema arabicum HOM05D003201 ORTHO05D008914 6.5e-93 344.7 276 61.6
A03p52400 Brassica napus HOM05D000936 ORTHO05D008914 6.5e-93 344.7 277 61.0
PSO782G1293 Papaver somniferum HOM05D003201 ORTHO05D008914 6.5e-93 344.7 279 61.3
A01p12040 Brassica napus HOM05D003201 ORTHO05D008914 1.4e-92 343.6 274 60.6
C01p14340 Brassica napus HOM05D003201 ORTHO05D008914 1.9e-92 343.2 276 59.1
BolC1t01393H Brassica oleracea HOM05D000280 ORTHO05D004510 1.9e-92 343.2 274 60.2
Lj1g0010900 Lotus japonicus HOM05D003201 ORTHO05D008914 3.2e-92 342.4 281 58.7
CARHR227150 Cardamine hirsuta HOM05D003201 ORTHO05D008914 7.2e-92 341.3 279 60.6
Potri.006G280600 Populus trichocarpa HOM05D003201 ORTHO05D008914 7.2e-92 341.3 278 65.8
BraA01t01146Z Brassica rapa HOM05D003201 ORTHO05D008914 1.2e-91 340.5 274 60.2
PGR042G2091 Punica granatum HOM05D003201 ORTHO05D008914 1.2e-91 340.5 282 60.3
Glyma.04G077000 Glycine max HOM05D003201 ORTHO05D008914 2.1e-91 339.7 281 60.1
BcaC06g30651 Brassica carinata HOM05D003201 ORTHO05D008914 2.7e-91 339.3 277 60.3
Thhalv10025951m.g Eutrema salsugineum HOM05D003201 ORTHO05D008914 6.1e-91 338.2 277 58.8
Lalb_Chr11g0064231 Lupinus albus HOM05D003201 ORTHO05D008914 6.1e-91 338.2 271 63.5
Carub.0007s2085 Capsella rubella HOM05D003201 ORTHO05D008914 3.0e-90 335.9 277 59.9
AUR62028026 Chenopodium quinoa HOM05D003201 ORTHO05D008914 3.9e-90 335.5 279 58.8
BolC7t45584H Brassica oleracea HOM05D000936 ORTHO05D008914 8.8e-90 334.3 277 59.2
BraA03t14319Z Brassica rapa HOM05D003201 ORTHO05D008914 8.8e-90 334.3 277 59.2
Sp7g18670 Schrenkiella parvula HOM05D003201 ORTHO05D008914 5.7e-89 331.6 277 59.9
EL10Ac8g19259 Beta vulgaris HOM05D003201 ORTHO05D008914 7.4e-89 331.3 279 58.8
arahy.Tifrunner.gnm1.ann1.6BLG7S Arachis hypogaea HOM05D003201 ORTHO05D008914 1.3e-88 330.5 305 54.4
arahy.Tifrunner.gnm1.ann1.N5J460 Arachis hypogaea HOM05D003201 ORTHO05D008914 1.8e-87 326.6 309 52.1
Atru.BG.264.p Acer truncatum HOM05D003201 ORTHO05D008914 5.3e-87 325.1 270 63.3
Lsat_1_v5_gn_5_73181 Lactuca sativa HOM05D003201 ORTHO05D008914 3.4e-86 322.4 273 58.6
FAN20G1097 Fragaria x ananassa HOM05D000163 ORTHO05D008914 1.3e-85 320.5 251 65.3
VMungo1309G0938 Vigna mungo HOM05D003201 ORTHO05D008914 6.1e-83 311.6 353 47.3
Phvul.009G102800 Phaseolus vulgaris HOM05D003201 ORTHO05D008914 1.5e-81 307.0 204 67.2
Ca_15643_v3 Cicer arietinum L. HOM05D000163 ORTHO05D000219 2.6e-81 306.2 267 56.2
BcaNung03722 Brassica carinata HOM05D000936 ORTHO05D001411 1.3e-80 303.9 277 55.2
ATR0686G110 Amborella trichopoda HOM05D003201 ORTHO05D008914 5.3e-79 298.5 243 57.6
Sc23g0004340 Simmondsia chinensis HOM05D003201 ORTHO05D008914 7.2e-76 288.1 209 65.6
Sabra06G0217200 Salix brachista HOM05D002037 ORTHO05D005261 6.1e-75 285.0 331 52.3
HPP92_024271 Vanilla planifolia HOM05D003201 ORTHO05D008914 5.7e-73 278.5 253 57.3
TAR636G2614 Trochodendron aralioides HOM05D003201 ORTHO05D008914 2.2e-72 276.6 156 82.7
SEGI_35572 Sequoiadendron giganteum HOM05D003201 ORTHO05D008914 1.4e-71 273.9 280 49.6
AUR62020698 Chenopodium quinoa HOM05D003201 ORTHO05D008914 4.1e-71 272.3 279 51.6
FAN27G2114 Fragaria x ananassa HOM05D000163 ORTHO05D000219 3.1e-63 246.1 217 62.7
Sed0017242 Sechium edule HOM05D003201 ORTHO05D008914 1.0e-58 231.1 188 64.4
Potri.006G281101 Populus trichocarpa HOM05D003201 ORTHO05D008914 6.3e-56 221.9 222 55.9
Mapoly0037s0034 Marchantia polymorpha HOM05D003201 ORTHO05D008914 2.5e-52 209.9 213 45.1
Pp3c10_22770 Physcomitrium patens HOM05D003201 ORTHO05D008914 4.2e-52 209.1 272 39.0
unitig_32.g11042 Utricularia gibba HOM05D003201 ORTHO05D008914 7.2e-52 208.4 190 57.4
AagrBONN_evm.TU.Sc2ySwM_344.2003 Anthoceros agrestis HOM05D003201 ORTHO05D008914 3.4e-49 199.5 232 44.4
SMO115G0061 Selaginella moellendorffii HOM05D003201 ORTHO05D008914 1.7e-48 197.2 234 40.2
SHI31610 Sapria himalayana HOM05D003201 ORTHO05D008914 1.4e-42 177.6 114 66.7
Nn7g38306 Nelumbo nucifera HOM05D003201 ORTHO05D008914 1.2e-38 164.5 102 71.6
Zm00001eb079750 Zea mays HOM05D003201 ORTHO05D008914 2.0e-38 163.7 197 45.7
MD08G1125300 Malus domestica HOM05D003201 ORTHO05D008914 8.1e-35 151.8 216 43.1
Hma1.2p1_1357F.1_g277905 Hydrangea macrophylla HOM05D003201 ORTHO05D008914 1.7e-29 134.0 70 80.0
CDE05G1961 Ceratophyllum demersum HOM05D003201 ORTHO05D008914 7.3e-28 128.6 141 53.2
COL.COLO4_10365 Corchorus olitorius HOM05D003201 ORTHO05D008914 2.8e-27 126.7 178 43.8
Os04g0476400 Oryza sativa ssp. japonica HOM05D003201 ORTHO05D008914 8.9e-26 121.7 97 59.8
TPR.G12326 Trifolium pratense HOM05D003201 ORTHO05D008914 6.4e-24 115.5 78 67.9
CBR_g23989 Chara braunii HOM05D003201 ORTHO05D008914 1.5e-17 94.4 68 55.9
PRCOL_00004174 Prasinoderma coloniale HOM05D003201 ORTHO05D008914 4.2e-15 86.3 197 30.5
CBR_g23991 Chara braunii HOM05D003201 ORTHO05D008914 5.1e-13 79.3 52 59.6
Cre07.g320800 Chlamydomonas reinhardtii HOM05D003201 ORTHO05D008914 4.8e-11 72.8 238 23.9
Phvul.009G102700 Phaseolus vulgaris HOM05D003201 ORTHO05D008914 4.9e-08 62.8 280 23.9


User provided reference genes

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