Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0050204 Camellia sinensis var. sinensis HOM05D006592 ORTHO05D008122 3.4e-132 474.9 227 100.0
Actinidia29329 Actinidia chinensis HOM05D006592 ORTHO05D008122 5.1e-80 301.6 168 85.1
GSVIVG01036935001 Vitis vinifera HOM05D006592 ORTHO05D008122 6.0e-73 278.1 168 78.0
Dinv37459 Davidia involucrata HOM05D006592 ORTHO05D008122 1.1e-71 273.9 168 78.0
TAR622G1375 Trochodendron aralioides HOM05D006592 ORTHO05D008122 2.1e-70 269.6 168 75.6
Hma1.2p1_1256F.1_g270670 Hydrangea macrophylla HOM05D006592 ORTHO05D008122 6.9e-69 264.6 167 74.9
vmacro05080 Vaccinium macrocarpon HOM05D006592 ORTHO05D008122 1.5e-68 263.5 170 75.3
Prupe.2G060600 Prunus persica HOM05D006592 ORTHO05D008122 1.0e-67 260.8 166 71.1
Aqoxy7G04139 Aquilegia oxysepala HOM05D006592 ORTHO05D008122 1.3e-67 260.4 168 72.0
PSO063G4459 Papaver somniferum HOM05D006592 ORTHO05D008122 1.7e-67 260.0 167 71.3
MBI04_g30774_MAGBIO Magnolia biondii HOM05D006592 ORTHO05D008122 1.1e-66 257.3 167 70.1
PSO782G0843 Papaver somniferum HOM05D006592 ORTHO05D008122 1.9e-66 256.5 167 70.1
Potri.003G105100 Populus trichocarpa HOM05D006592 ORTHO05D008122 1.9e-66 256.5 167 71.9
Manes.17G005500 Manihot esculenta HOM05D006592 ORTHO05D008122 2.5e-66 256.1 166 71.7
Sabra03G0072100 Salix brachista HOM05D006592 ORTHO05D008122 2.1e-65 253.1 167 71.3
MD07G1026800 Malus domestica HOM05D006592 ORTHO05D008122 2.7e-65 252.7 166 67.5
RcHm_v2.0_Chr1g0331171 Rosa chinensis HOM05D006592 ORTHO05D008122 2.7e-65 252.7 165 68.5
Eucgr.E01202 Eucalyptus grandis HOM05D006592 ORTHO05D008122 6.1e-65 251.5 166 69.9
Rhsim07G0174700 Rhododendron simsii HOM05D006592 ORTHO05D008122 6.1e-65 251.5 195 65.1
FAN25G1190 Fragaria x ananassa HOM05D006592 ORTHO05D008122 7.9e-65 251.1 165 67.3
QL02p100032 Quercus lobata HOM05D006592 ORTHO05D008122 1.0e-64 250.8 166 70.5
FvH4_3g41920 Fragaria vesca HOM05D006592 ORTHO05D008122 1.3e-64 250.4 165 67.3
CDE11G0624 Ceratophyllum demersum HOM05D006592 ORTHO05D008122 3.9e-64 248.8 165 66.7
CANSAT11G2102 Cannabis sativa HOM05D006592 ORTHO05D008122 1.1e-63 247.3 168 66.1
CiPaw.11G105000 Carya illinoinensis HOM05D006592 ORTHO05D008122 1.1e-63 247.3 166 70.5
FAN11G2031 Fragaria x ananassa HOM05D006592 ORTHO05D008122 2.5e-63 246.1 165 66.7
PGR042G2051 Punica granatum HOM05D006592 ORTHO05D008122 3.3e-63 245.7 162 69.1
Glyma.16G075200 Glycine max HOM05D006592 ORTHO05D008122 7.4e-63 244.6 165 67.9
TWI60G0674 Tripterygium wilfordii HOM05D006592 ORTHO05D008122 9.7e-63 244.2 167 65.9
Ca_22475_v3 Cicer arietinum L. HOM05D006592 ORTHO05D008122 1.3e-62 243.8 168 67.9
Haze_08005 Corylus avellana HOM05D006592 ORTHO05D008122 1.3e-62 243.8 166 67.5
Oeu028120.2 Olea europaea HOM05D006592 ORTHO05D008122 1.3e-62 243.8 168 66.1
Nitab4.5_0004477g0030 Nicotiana tabacum HOM05D006592 ORTHO05D008122 3.7e-62 242.3 170 65.9
arahy.Tifrunner.gnm1.ann1.6CV8VS Arachis hypogaea HOM05D006592 ORTHO05D008122 4.8e-62 241.9 168 66.7
CAN.G561.14 Capsicum annuum HOM05D006592 ORTHO05D008122 6.3e-62 241.5 165 67.3
SalBow8G4832 Salvia bowleyana HOM05D006592 ORTHO05D008122 6.3e-62 241.5 168 63.7
Atru.chr6.2117 Acer truncatum HOM05D006592 ORTHO05D008122 8.2e-62 241.1 166 68.7
arahy.Tifrunner.gnm1.ann1.35U8WI Arachis hypogaea HOM05D006592 ORTHO05D008122 8.2e-62 241.1 168 66.7
ATR0829G075 Amborella trichopoda HOM05D006592 ORTHO05D008122 1.4e-61 240.4 168 61.9
Lsat_1_v5_gn_5_55220 Lactuca sativa HOM05D006592 ORTHO05D008122 1.8e-61 240.0 166 65.7
ClCG11G016240 Citrullus lanatus HOM05D006592 ORTHO05D008122 2.4e-61 239.6 167 65.3
Nitab4.5_0000063g0390 Nicotiana tabacum HOM05D006592 ORTHO05D008122 2.4e-61 239.6 168 64.9
SalBow8G1786 Salvia bowleyana HOM05D006592 ORTHO05D008122 2.4e-61 239.6 170 61.8
TPR.G16815 Trifolium pratense HOM05D006592 ORTHO05D008122 3.1e-61 239.2 165 67.3
DCAR_028262 Daucus carota HOM05D006592 ORTHO05D008122 4.1e-61 238.8 166 65.7
Migut.E01392 Erythranthe guttata HOM05D006592 ORTHO05D008122 4.1e-61 238.8 168 63.7
HanXRQChr13g0411871 Helianthus annuus HOM05D006592 ORTHO05D008122 6.9e-61 238.0 166 67.5
Phvul.003G276900 Phaseolus vulgaris HOM05D006592 ORTHO05D008122 9.0e-61 237.7 165 65.5
SGA_v2.0_scaffold144G35824 Striga asiatica HOM05D006592 ORTHO05D008122 9.0e-61 237.7 168 64.3
CsaV3_4G037940 Cucumis sativus L. HOM05D006592 ORTHO05D008122 1.2e-60 237.3 167 63.5
Solyc08g005860.3 Solanum lycopersicum HOM05D006592 ORTHO05D008122 1.2e-60 237.3 168 63.7
EL10Ac5g11887 Beta vulgaris HOM05D006592 ORTHO05D008122 1.5e-60 236.9 168 62.5
Peaxi162Scf00045g01236 Petunia axillaris HOM05D006592 ORTHO05D008122 2.0e-60 236.5 168 63.7
FAN21G3043 Fragaria x ananassa HOM05D006592 ORTHO05D008122 2.6e-60 236.1 165 64.8
Sopen08g001820 Solanum pennellii HOM05D006592 ORTHO05D008122 4.5e-60 235.3 168 63.1
PGSC0003DMG400024141 Solanum tuberosum HOM05D006592 ORTHO05D008122 4.5e-60 235.3 168 63.1
ECA240G2178 Erigeron canadensis HOM05D006592 ORTHO05D008122 1.0e-59 234.2 166 65.1
Medtr8g071820 Medicago truncatula HOM05D006592 ORTHO05D008122 1.3e-59 233.8 165 64.8
Cc00_g08640 Coffea canephora HOM05D006592 ORTHO05D008122 1.7e-59 233.4 177 61.0
Lalb_Chr05g0229391 Lupinus albus HOM05D006592 ORTHO05D008122 5.0e-59 231.9 165 63.0
Zm00001eb430350 Zea mays HOM05D006592 ORTHO05D008122 5.0e-59 231.9 164 59.8
MELO3C010544.2 Cucumis melo HOM05D006592 ORTHO05D008122 8.5e-59 231.1 168 61.9
Ah.02g117360 Amaranthus hybridus HOM05D006592 ORTHO05D008122 1.4e-58 230.3 170 60.0
AUR62007438 Chenopodium quinoa HOM05D006592 ORTHO05D008122 1.9e-58 229.9 168 58.9
THA.LOC104814375 Tarenaya hassleriana HOM05D006592 ORTHO05D008122 1.9e-58 229.9 166 62.0
Sp1g27210 Schrenkiella parvula HOM05D006592 ORTHO05D008122 7.2e-58 228.0 166 60.2
Thhalv10007328m.g Eutrema salsugineum HOM05D006592 ORTHO05D008122 1.6e-57 226.9 166 59.6
Carub.0001s2983 Capsella rubella HOM05D006592 ORTHO05D008122 2.7e-57 226.1 167 59.3
AT1G31410 Arabidopsis thaliana HOM05D006592 ORTHO05D008122 6.1e-57 224.9 166 59.0
AL1G49640 Arabidopsis lyrata HOM05D006592 ORTHO05D008122 1.4e-56 223.8 170 57.1
Aa31LG2G14540 Aethionema arabicum HOM05D006592 ORTHO05D008122 3.0e-56 222.6 189 55.0
A07p09410 Brassica napus HOM05D006592 ORTHO05D008122 7.4e-55 218.0 166 58.4
Thecc.03G323800 Theobroma cacao HOM05D006592 ORTHO05D008122 9.7e-55 217.6 168 61.3
BcaB03g13796 Brassica carinata HOM05D006592 ORTHO05D008122 1.7e-54 216.9 166 58.4
Duzib084G0624 Durio zibethinus HOM05D006592 ORTHO05D008122 2.2e-54 216.5 165 61.2
BraA07t28736Z Brassica rapa HOM05D006592 ORTHO05D008122 1.1e-53 214.2 166 57.8
Hund14317 Selenicereus undatus HOM05D006592 ORTHO05D008122 2.4e-53 213.0 213 48.8
C07p14480 Brassica napus HOM05D006592 ORTHO05D008122 5.3e-53 211.8 166 57.2
Gohir.A08G147100 Gossypium hirsutum HOM05D006592 ORTHO05D008122 5.3e-53 211.8 170 59.4
Gohir.D08G168300 Gossypium hirsutum HOM05D006592 ORTHO05D008122 5.3e-53 211.8 170 59.4
Gorai.004G175600 Gossypium raimondii HOM05D006592 ORTHO05D008122 1.5e-52 210.3 170 58.8
BolC7t41947H Brassica oleracea HOM05D006592 ORTHO05D008122 3.4e-52 209.1 166 56.6
unitig_899.g15474 Utricularia gibba HOM05D006592 ORTHO05D008122 7.7e-52 208.0 158 58.2
VMungo0251G2096 Vigna mungo HOM05D006592 ORTHO05D008122 1.9e-50 203.4 165 58.2
Pp3c1_19230 Physcomitrium patens HOM05D006592 ORTHO05D008122 4.2e-50 202.2 165 52.1
AagrBONN_evm.TU.Sc2ySwM_344.4668 Anthoceros agrestis HOM05D006592 ORTHO05D008122 1.4e-48 197.2 166 50.0
Mapoly0006s0240 Marchantia polymorpha HOM05D006592 ORTHO05D008122 2.3e-48 196.4 166 50.6
COL.COLO4_16712 Corchorus olitorius HOM05D006592 ORTHO05D008122 2.9e-43 179.5 142 59.2
AUR62027300 Chenopodium quinoa HOM05D006592 ORTHO05D008122 4.7e-41 172.2 196 46.9
Cpa.g.sc137.28 Carica papaya HOM05D006592 ORTHO05D008122 1.8e-40 170.2 120 65.8
SMO244G0026 Selaginella moellendorffii HOM05D006592 ORTHO05D008122 1.8e-40 170.2 164 46.3
Glyma.16G106700 Glycine max HOM05D006592 ORTHO05D008122 6.7e-40 168.3 120 65.0
Os04g0602200 Oryza sativa ssp. japonica HOM05D006592 ORTHO05D008122 2.2e-38 163.3 110 58.2
Psat4g134920 Pisum sativum HOM05D006592 ORTHO05D008122 3.7e-38 162.5 123 61.8
Lj4g0015969 Lotus japonicus HOM05D006592 ORTHO05D008122 1.1e-37 161.0 123 59.3
Sed0001244 Sechium edule HOM05D006592 ORTHO05D008122 1.1e-37 161.0 122 59.0
Sc01g0005990 Simmondsia chinensis HOM05D006592 ORTHO05D008122 2.4e-37 159.8 122 59.8
CBR_g19872 Chara braunii HOM05D006592 ORTHO05D008122 1.7e-30 137.1 174 40.8
CBR_g37675 Chara braunii HOM05D006592 ORTHO05D008122 6.3e-30 135.2 174 40.2
AagrBONN_evm.TU.Sc2ySwM_117.3387 Anthoceros agrestis HOM05D006592 ORTHO05D008122 3.5e-28 129.4 165 37.0
Cre06.g292100 Chlamydomonas reinhardtii HOM05D006592 ORTHO05D008122 1.6e-20 104.0 144 34.7
Ciclev10004057m.g Citrus clementina HOM05D006592 ORTHO05D008122 2.7e-20 103.2 98 52.0
COL.COLO4_04363 Corchorus olitorius HOM05D003801 ORTHO05D008122 1.0e-19 101.3 63 69.8
Hma1.2p1_1046F.1_g251540 Hydrangea macrophylla HOM05D006592 ORTHO05D008122 3.4e-15 86.3 46 80.4
Glyma.16G106500 Glycine max HOM05D006592 ORTHO05D008122 1.7e-14 84.0 48 72.9
Psat4g109400 Pisum sativum HOM05D006592 ORTHO05D008122 3.7e-14 82.8 67 56.7
Hma1.2p1_1046F.1_g251530 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 5.9e-12 75.5 51 66.7
Nn1g09214 Nelumbo nucifera HOM05D006592 ORTHO05D008122 3.9e-11 72.8 44 70.5
HPP92_015141 Vanilla planifolia HOM05D006592 ORTHO05D008122 8.6e-11 71.6 38 76.3
Sc01g0005980 Simmondsia chinensis HOM05D006592 ORTHO05D008122 2.8e-09 66.6 35 77.1
CARHR030900 Cardamine hirsuta HOM05D006592 ORTHO05D008122 8.0e-09 65.1 41 65.9
SEGI_04489 Sequoiadendron giganteum HOM05D006592 ORTHO05D008122 1.0e-08 64.7 38 71.1
PRCOL_00001501 Prasinoderma coloniale HOM05D006592 ORTHO05D008122 1.4e-08 64.3 179 26.3
MCO09G637 Micromonas commoda HOM05D006592 ORTHO05D008122 3.7e-06 56.2 205 23.4
C08p16710 Brassica napus HOM05D006592 ORTHO05D008122 8.3e-06 55.1 29 72.4


User provided reference genes

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