Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0050195 Camellia sinensis var. sinensis HOM05D007727 ORTHO05D009078 3.8e-67 258.1 134 100.0
Dinv38830 Davidia involucrata HOM05D007727 ORTHO05D009078 2.0e-23 112.8 138 55.8
Rhsim02G0243900 Rhododendron simsii HOM05D007727 ORTHO05D009078 2.0e-23 112.8 148 52.7
Hma1.2p1_1746F.1_g300420 Hydrangea macrophylla HOM05D007727 ORTHO05D009078 1.1e-21 107.1 146 47.9
CSS0019090 Camellia sinensis var. sinensis HOM05D007727 ORTHO05D009078 7.1e-21 104.4 133 52.6
Hma1.2p1_1461F.1_g285070 Hydrangea macrophylla HOM05D007727 ORTHO05D009078 7.1e-21 104.4 144 47.9
Rhsim02G0243700 Rhododendron simsii HOM05D007727 ORTHO05D009078 9.2e-21 104.0 146 48.6
Rhsim02G0244000 Rhododendron simsii HOM05D007727 ORTHO05D009078 6.0e-20 101.3 148 49.3
Cfa012009 Carpinus fangiana HOM05D007727 ORTHO05D009078 2.3e-19 99.4 113 48.7
Rhsim02G0243600 Rhododendron simsii HOM05D007727 ORTHO05D009078 2.3e-19 99.4 141 48.2
Rhsim02G0243800 Rhododendron simsii HOM05D007727 ORTHO05D009078 2.3e-19 99.4 115 55.7
CiPaw.12G082800 Carya illinoinensis HOM05D007727 ORTHO05D009078 3.9e-19 98.6 121 50.4
Potri.003G140200 Populus trichocarpa HOM05D007727 ORTHO05D009078 6.6e-19 97.8 112 49.1
Potri.003G140233 Populus trichocarpa HOM05D007727 ORTHO05D009078 6.6e-19 97.8 112 49.1
Potri.003G140266 Populus trichocarpa HOM05D007727 ORTHO05D009078 6.6e-19 97.8 112 49.1
Potri.004G151000 Populus trichocarpa HOM05D007727 ORTHO05D009078 1.1e-18 97.1 116 49.1
Haze_09064 Corylus avellana HOM05D007727 ORTHO05D009078 2.5e-18 95.9 111 46.8
CiPaw.12G082600 Carya illinoinensis HOM05D007727 ORTHO05D009078 3.3e-18 95.5 121 48.8
Potri.001G091400 Populus trichocarpa HOM05D007727 ORTHO05D009078 4.3e-18 95.1 139 47.5
Hma1.2p1_1461F.1_g285060 Hydrangea macrophylla HOM05D007727 ORTHO05D009078 1.2e-17 93.6 66 68.2
Hma1.2p1_2808F.1_g328866 Hydrangea macrophylla HOM05D007727 ORTHO05D009078 1.2e-17 93.6 66 68.2
Haze_09065 Corylus avellana HOM05D007727 ORTHO05D009078 2.1e-17 92.8 113 47.8
QL02p030408 Quercus lobata HOM05D007727 ORTHO05D009078 4.7e-17 91.7 125 49.6
QL02p030389 Quercus lobata HOM05D007727 ORTHO05D009078 6.2e-17 91.3 125 49.6
Cfa012003 Carpinus fangiana HOM05D007727 ORTHO05D009078 8.1e-17 90.9 113 46.0
Cfa012008 Carpinus fangiana HOM05D007727 ORTHO05D009078 8.1e-17 90.9 113 46.0
QL02p030393 Quercus lobata HOM05D007727 ORTHO05D009078 1.4e-16 90.1 124 49.2
QL02p030384 Quercus lobata HOM05D007727 ORTHO05D009078 1.8e-16 89.7 118 49.2
Thecc.03G298300 Theobroma cacao HOM05D007727 ORTHO05D009078 3.1e-16 89.0 121 44.6
Glyma.08G023200 Glycine max HOM05D007727 ORTHO05D009078 8.9e-16 87.4 104 47.1
COL.COLO4_10705 Corchorus olitorius HOM05D007727 ORTHO05D009078 2.0e-15 86.3 147 42.9
Prupe.5G120300 Prunus persica HOM05D007727 ORTHO05D009078 7.6e-15 84.3 152 46.1
Sabra01G0067800 Salix brachista HOM05D007727 ORTHO05D009078 1.7e-14 83.2 139 43.2
Glyma.08G022800 Glycine max HOM05D007727 ORTHO05D009078 2.2e-14 82.8 103 53.4
Sabra01G0067700 Salix brachista HOM05D007727 ORTHO05D009078 4.9e-14 81.6 139 42.4
LjContig00312_ERROPOS870357g0016151 Lotus japonicus HOM05D007727 ORTHO05D009078 6.4e-14 81.3 102 48.0
Lalb_Chr05g0224131 Lupinus albus HOM05D007727 ORTHO05D009078 6.4e-14 81.3 125 43.2
VMungo1215G2373 Vigna mungo HOM05D007727 ORTHO05D009078 6.4e-14 81.3 100 49.0
CiPaw.11G121100 Carya illinoinensis HOM05D007727 ORTHO05D009078 8.4e-14 80.9 115 46.1
MSTRG.25675 Avicennia marina HOM05D007727 ORTHO05D009078 1.4e-13 80.1 109 44.0
Glyma.05G216900 Glycine max HOM05D007727 ORTHO05D009078 3.2e-13 79.0 100 48.0
Glyma.01G225500 Glycine max HOM05D007727 ORTHO05D009078 7.1e-13 77.8 103 48.5
Gohir.D08G130400 Gossypium hirsutum HOM05D007727 ORTHO05D009078 7.1e-13 77.8 118 40.7
Duzib205G0888 Durio zibethinus HOM05D007727 ORTHO05D009078 1.2e-12 77.0 144 37.5
Manes.02G009800 Manihot esculenta HOM05D007727 ORTHO05D009078 1.2e-12 77.0 126 40.5
Glyma.11G017500 Glycine max HOM05D007727 ORTHO05D009078 2.7e-12 75.9 106 48.1
Gohir.A08G103450 Gossypium hirsutum HOM05D007727 ORTHO05D009078 2.7e-12 75.9 116 40.5
Gorai.004G133300 Gossypium raimondii HOM05D007727 ORTHO05D009078 2.7e-12 75.9 146 37.0
Phvul.002G298200 Phaseolus vulgaris HOM05D007727 ORTHO05D009078 3.5e-12 75.5 103 46.6
Oeu031672.1 Olea europaea HOM05D007727 ORTHO05D009078 4.6e-12 75.1 107 47.7
Oeu031673.1 Olea europaea HOM05D007727 ORTHO05D009078 4.6e-12 75.1 108 48.1
Gohir.D03G083800 Gossypium hirsutum HOM05D007727 ORTHO05D009078 6.0e-12 74.7 86 54.7
Gorai.003G078900 Gossypium raimondii HOM05D007727 ORTHO05D009078 6.0e-12 74.7 86 54.7
Phvul.002G164400 Phaseolus vulgaris HOM05D007727 ORTHO05D009078 6.0e-12 74.7 105 46.7
Phvul.002G298600 Phaseolus vulgaris HOM05D007727 ORTHO05D009078 6.0e-12 74.7 102 46.1
Glyma.05G217200 Glycine max HOM05D007727 ORTHO05D009078 1.7e-11 73.2 104 44.2
Nitab4.5_0002782g0050 Nicotiana tabacum HOM05D011491 ORTHO05D009078 2.3e-11 72.8 107 40.2
Ciclev10022327m.g Citrus clementina HOM05D007727 ORTHO05D009078 3.0e-11 72.4 106 45.3
Gohir.A02G100000 Gossypium hirsutum HOM05D007727 ORTHO05D009078 3.9e-11 72.0 87 50.6
Lj4g0015473 Lotus japonicus HOM05D007727 ORTHO05D009078 6.6e-11 71.2 109 44.0
Eucgr.D01744 Eucalyptus grandis HOM05D007727 ORTHO05D009078 1.9e-10 69.7 115 39.1
FAN13G2104 Fragaria x ananassa HOM05D007727 ORTHO05D009078 2.5e-10 69.3 115 41.7
FAN13G3265 Fragaria x ananassa HOM05D007727 ORTHO05D009078 2.5e-10 69.3 115 41.7
TPR.G11121 Trifolium pratense HOM05D007727 ORTHO05D009078 2.5e-10 69.3 101 42.6
PGSC0003DMG400012147 Solanum tuberosum HOM05D011491 ORTHO05D009078 3.3e-10 68.9 140 37.9
Eucgr.D01742 Eucalyptus grandis HOM05D007727 ORTHO05D009078 4.3e-10 68.6 64 53.1
Sopen08g030640 Solanum pennellii HOM05D011491 ORTHO05D009078 4.3e-10 68.6 47 66.0
Nitab4.5_0001210g0030 Nicotiana tabacum HOM05D011491 ORTHO05D009078 5.6e-10 68.2 106 41.5
CANSAT21G1217 Cannabis sativa HOM05D007727 ORTHO05D009078 7.3e-10 67.8 76 46.1
FvH4_5g04620 Fragaria vesca HOM05D007727 ORTHO05D009078 7.3e-10 67.8 143 37.1
FAN18G4426 Fragaria x ananassa HOM05D007727 ORTHO05D009078 7.3e-10 67.8 143 37.1
PGSC0003DMG400012146 Solanum tuberosum HOM05D011491 ORTHO05D009078 9.6e-10 67.4 138 35.5
Medtr8g099485 Medicago truncatula HOM05D007727 ORTHO05D009078 1.2e-09 67.0 94 44.7
FAN18G0179 Fragaria x ananassa HOM05D007727 ORTHO05D009078 2.1e-09 66.2 143 37.1
TPR.G3394 Trifolium pratense HOM05D007727 ORTHO05D009078 2.1e-09 66.2 102 42.2
CAN.G1804.6 Capsicum annuum HOM05D011491 ORTHO05D009078 2.8e-09 65.9 122 35.2
ECA240G1351 Erigeron canadensis HOM05D007727 ORTHO05D009078 2.8e-09 65.9 62 58.1
FAN04G2059 Fragaria x ananassa HOM05D007727 ORTHO05D009078 2.8e-09 65.9 128 38.3
FAN08G2749 Fragaria x ananassa HOM05D007727 ORTHO05D009078 2.8e-09 65.9 143 37.8
VMungo0251G2989 Vigna mungo HOM05D007727 ORTHO05D009078 3.6e-09 65.5 101 42.6
CAN.G1804.7 Capsicum annuum HOM05D011491 ORTHO05D009078 4.7e-09 65.1 122 36.1
Eucgr.D01747 Eucalyptus grandis HOM05D007727 ORTHO05D009078 4.7e-09 65.1 113 39.8
PGSC0003DMG400012144 Solanum tuberosum HOM05D011491 ORTHO05D009078 6.2e-09 64.7 127 37.0
TPR.G3425 Trifolium pratense HOM05D007727 ORTHO05D009078 6.2e-09 64.7 97 38.1
TPR.G3415 Trifolium pratense HOM05D007727 ORTHO05D009078 1.1e-08 63.9 128 35.9
Solyc08g082380.1 Solanum lycopersicum HOM05D011491 ORTHO05D009078 1.8e-08 63.2 113 34.5
Lj4g0008549 Lotus japonicus HOM05D007727 ORTHO05D009078 6.8e-08 61.2 106 40.6
ClCG07G011610 Citrullus lanatus HOM05D007727 ORTHO05D009078 1.2e-07 60.5 98 41.8
Peaxi162Scf00074g00091 Petunia axillaris HOM05D011491 ORTHO05D009078 1.5e-07 60.1 110 39.1
TPR.G25603 Trifolium pratense HOM05D007727 ORTHO05D009078 2.0e-07 59.7 113 38.1
AUR62010842 Chenopodium quinoa HOM05D007727 ORTHO05D009078 3.4e-07 58.9 50 48.0
Nitab4.5_0002782g0020 Nicotiana tabacum HOM05D011491 ORTHO05D009078 3.4e-07 58.9 107 37.4
PGSC0003DMG400012145 Solanum tuberosum HOM05D011491 ORTHO05D009078 4.4e-07 58.5 111 36.9
Psat2g185360 Pisum sativum HOM05D007727 ORTHO05D009078 5.8e-07 58.2 54 53.7
AUR62019842 Chenopodium quinoa HOM05D007727 ORTHO05D009078 7.6e-07 57.8 85 36.5
CsaV3_4G006600 Cucumis sativus L. HOM05D007727 ORTHO05D009078 1.7e-06 56.6 106 34.9
Medtr5g009290 Medicago truncatula HOM05D007727 ORTHO05D009078 2.2e-06 56.2 109 36.7
TAR374G1599 Trochodendron aralioides HOM05D026466 ORTHO05D009078 2.2e-06 56.2 133 37.6
MELO3C016295.2 Cucumis melo HOM05D007727 ORTHO05D009078 3.8e-06 55.5 105 36.2
Peaxi162Scf00074g00092 Petunia axillaris HOM05D011491 ORTHO05D009078 6.4e-06 54.7 119 37.8


User provided reference genes

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