Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0050149 Camellia sinensis var. sinensis HOM05D006793 ORTHO05D003476 4.9e-158 561.2 310 100.0
Actinidia06714 Actinidia chinensis HOM05D006793 ORTHO05D003476 5.5e-77 292.0 310 57.4
Dinv31270 Davidia involucrata HOM05D006793 ORTHO05D003476 1.0e-67 261.2 312 58.3
CSS0025253 Camellia sinensis var. sinensis HOM05D006793 ORTHO05D000001 9.5e-61 238.0 311 52.4
Rhsim03G0110800 Rhododendron simsii HOM05D006793 ORTHO05D003476 9.2e-56 221.5 307 49.5
Hma1.2p1_0454F.1_g156300 Hydrangea macrophylla HOM05D006793 ORTHO05D003476 6.6e-54 215.3 318 45.0
vmacro07208 Vaccinium macrocarpon HOM05D000992 ORTHO05D006704 2.2e-49 200.3 373 40.8
TAR636G1084 Trochodendron aralioides HOM05D006793 ORTHO05D003476 5.2e-43 179.1 340 40.3
GSVIVG01005025001 Vitis vinifera HOM05D006793 ORTHO05D003476 6.4e-41 172.2 324 44.1
Thecc.10G090800 Theobroma cacao HOM05D006793 ORTHO05D003476 4.6e-31 139.4 318 39.9
TAR633G2614 Trochodendron aralioides HOM05D006793 ORTHO05D009315 1.7e-30 137.5 363 36.1
Duzib114G0110 Durio zibethinus HOM05D006793 ORTHO05D003476 2.3e-30 137.1 315 36.2
TAR476G0002 Trochodendron aralioides HOM05D006793 ORTHO05D003476 6.6e-30 135.6 363 35.0
Gohir.A01G128900 Gossypium hirsutum HOM05D006793 ORTHO05D003476 4.7e-28 129.4 320 33.4
Dinv20860 Davidia involucrata HOM05D006793 ORTHO05D003476 8.1e-28 128.6 120 56.7
Cfa001770 Carpinus fangiana HOM05D006793 ORTHO05D003476 1.4e-27 127.9 315 35.6
Gorai.002G144500 Gossypium raimondii HOM05D006793 ORTHO05D003476 1.4e-27 127.9 320 33.8
Sabra10G0179700 Salix brachista HOM05D006793 ORTHO05D003476 1.4e-27 127.9 325 35.7
MD07G1075000 Malus domestica HOM05D006793 ORTHO05D003476 1.8e-27 127.5 314 36.3
Manes.07G093300 Manihot esculenta HOM05D006793 ORTHO05D003476 2.4e-27 127.1 313 36.4
Potri.010G231900 Populus trichocarpa HOM05D006793 ORTHO05D003476 2.4e-27 127.1 360 33.9
Potri.008G029500 Populus trichocarpa HOM05D006793 ORTHO05D003476 4.0e-27 126.3 316 36.4
MD02G1241700 Malus domestica HOM05D006793 ORTHO05D003476 2.6e-26 123.6 307 35.5
Sabra08G0019600 Salix brachista HOM05D006793 ORTHO05D003476 3.4e-26 123.2 313 36.1
Ciclev10031613m.g Citrus clementina HOM05D006793 ORTHO05D003476 5.8e-26 122.5 319 34.8
Duzib128G0427 Durio zibethinus HOM05D006793 ORTHO05D003476 7.6e-26 122.1 319 34.8
Prupe.2G095200 Prunus persica HOM05D006793 ORTHO05D003476 9.9e-26 121.7 352 31.8
COL.COLO4_32868 Corchorus olitorius HOM05D006793 ORTHO05D003476 1.7e-25 120.9 294 37.1
Gohir.D01G118500 Gossypium hirsutum HOM05D006793 ORTHO05D003476 1.7e-25 120.9 320 33.1
Atru.chr11.746 Acer truncatum HOM05D006793 ORTHO05D003476 3.8e-25 119.8 423 30.0
QL08p052921 Quercus lobata HOM05D006793 ORTHO05D003476 1.1e-24 118.2 301 36.9
Manes.10G053400 Manihot esculenta HOM05D006793 ORTHO05D003476 2.4e-24 117.1 311 31.8
Migut.F01893 Erythranthe guttata HOM05D006793 ORTHO05D003476 1.0e-22 111.7 339 33.0
DCAR_019058 Daucus carota HOM05D006793 ORTHO05D003476 3.0e-22 110.2 348 29.0
CANSAT56G4476 Cannabis sativa HOM05D006793 ORTHO05D003476 6.6e-22 109.0 317 29.7
Sed0017585 Sechium edule HOM05D006793 ORTHO05D003476 7.3e-21 105.5 323 34.4
CsaV3_2G032770 Cucumis sativus L. HOM05D006793 ORTHO05D003476 1.6e-20 104.4 345 32.8
Oeu046660.1 Olea europaea HOM05D006793 ORTHO05D003476 2.8e-20 103.6 300 31.3
Peaxi162Scf00321g00037 Petunia axillaris HOM05D006793 ORTHO05D003476 1.1e-19 101.7 310 30.0
Nitab4.5_0006383g0010 Nicotiana tabacum HOM05D006793 ORTHO05D003476 3.1e-19 100.1 300 28.7
MD02G1237300 Malus domestica HOM05D006793 ORTHO05D003476 6.9e-19 99.0 316 30.7
TWI38G2135 Tripterygium wilfordii HOM05D006793 ORTHO05D003476 2.2e-17 94.0 256 33.2
Haze_16786 Corylus avellana HOM05D006793 ORTHO05D003476 3.8e-17 93.2 281 32.7
MSTRG.27506 Avicennia marina HOM05D006793 ORTHO05D003476 4.9e-17 92.8 285 30.2
CiPaw.01G264600 Carya illinoinensis HOM05D006793 ORTHO05D003476 1.1e-16 91.7 302 30.5
PGSC0003DMG400027329 Solanum tuberosum HOM05D006793 ORTHO05D003476 3.2e-16 90.1 299 27.8
Solyc11g007850.2 Solanum lycopersicum HOM05D006793 ORTHO05D003476 4.2e-16 89.7 310 28.1
Sopen11g003710 Solanum pennellii HOM05D006793 ORTHO05D003476 4.2e-16 89.7 308 28.2
Lalb_Chr02g0151171 Lupinus albus HOM05D006793 ORTHO05D003476 2.7e-15 87.0 243 30.5
MELO3C019853.2 Cucumis melo HOM05D006793 ORTHO05D003476 3.5e-15 86.7 340 32.6
FvH4_7g06800 Fragaria vesca HOM05D006793 ORTHO05D003476 6.0e-15 85.9 386 26.4
FAN06G1743 Fragaria x ananassa HOM05D006793 ORTHO05D003476 6.0e-15 85.9 386 26.4
Glyma.20G190600 Glycine max HOM05D006793 ORTHO05D003476 1.0e-14 85.1 250 33.2
Cc02_g10490 Coffea canephora HOM05D006793 ORTHO05D003476 1.3e-14 84.7 311 28.3
Nn6g35167 Nelumbo nucifera HOM05D006793 ORTHO05D003476 1.3e-14 84.7 289 27.0
arahy.Tifrunner.gnm1.ann1.U5ZVAW Arachis hypogaea HOM05D006793 ORTHO05D003476 2.3e-14 84.0 239 31.4
SalBow4G0791 Salvia bowleyana HOM05D006793 ORTHO05D003476 2.3e-14 84.0 334 26.6
arahy.Tifrunner.gnm1.ann1.BT04C1 Arachis hypogaea HOM05D006793 ORTHO05D003476 6.6e-14 82.4 243 32.5
PGR142G3005 Punica granatum HOM05D006793 ORTHO05D003476 8.7e-14 82.0 296 30.1
Nitab4.5_0000593g0350 Nicotiana tabacum HOM05D006793 ORTHO05D003476 1.5e-13 81.3 304 28.9
Phvul.007G141300 Phaseolus vulgaris HOM05D006793 ORTHO05D003476 3.3e-13 80.1 282 31.6
AUR62030173 Chenopodium quinoa HOM05D006793 ORTHO05D003476 4.3e-13 79.7 324 28.7
FAN03G3430 Fragaria x ananassa HOM05D006793 ORTHO05D003476 4.3e-13 79.7 336 27.4
Lj5g0011528 Lotus japonicus HOM05D006793 ORTHO05D003476 4.3e-13 79.7 256 29.7
Lalb_Chr21g0313091 Lupinus albus HOM05D006793 ORTHO05D003476 4.3e-13 79.7 246 30.1
FAN01G0293 Fragaria x ananassa HOM05D006793 ORTHO05D003476 5.6e-13 79.3 317 28.4
Nn2g13905 Nelumbo nucifera HOM05D006793 ORTHO05D003476 5.6e-13 79.3 253 30.4
FAN10G1411 Fragaria x ananassa HOM05D006793 ORTHO05D003476 9.6e-13 78.6 386 26.4
Eucgr.G02731 Eucalyptus grandis HOM05D006793 ORTHO05D003476 2.1e-12 77.4 342 24.9
Glyma.10G199900 Glycine max HOM05D006793 ORTHO05D003476 2.1e-12 77.4 266 35.7
HanXRQChr12g0368421 Helianthus annuus HOM05D006793 ORTHO05D003476 8.1e-12 75.5 123 36.6
RcHm_v2.0_Chr1g0336511 Rosa chinensis HOM05D006793 ORTHO05D003476 1.4e-11 74.7 318 28.3
VMungo0720G1705 Vigna mungo HOM05D006793 ORTHO05D003476 1.4e-11 74.7 248 30.2
AUR62002713 Chenopodium quinoa HOM05D006793 ORTHO05D003476 4.0e-11 73.2 329 27.7
Aqoxy2G01557 Aquilegia oxysepala HOM05D006793 ORTHO05D003476 6.9e-11 72.4 274 28.5
PSO801G0244 Papaver somniferum HOM05D006793 ORTHO05D003476 4.5e-10 69.7 327 24.8
MSTRG.404 Avicennia marina HOM05D006793 ORTHO05D003476 9.9e-10 68.6 278 27.3
SGA_v2.0_scaffold62G21362 Striga asiatica HOM05D006793 ORTHO05D003476 2.2e-09 67.4 121 32.2
TPR.G37771 Trifolium pratense HOM05D006793 ORTHO05D003476 2.2e-09 67.4 267 29.2
PSO339G4934 Papaver somniferum HOM05D006793 ORTHO05D003476 4.9e-09 66.2 329 24.0
Cpa.g.sc128.73 Carica papaya HOM05D006793 ORTHO05D003476 2.4e-08 63.9 194 29.9
Sc20g0001440 Simmondsia chinensis HOM05D006793 ORTHO05D003476 5.4e-08 62.8 210 27.6
Psat6g174040 Pisum sativum HOM05D006793 ORTHO05D003476 1.2e-07 61.6 253 28.1
Ca_10462_v3 Cicer arietinum L. HOM05D001977 ORTHO05D002246 1.6e-07 61.2 304 27.6
ECA233G3433 Erigeron canadensis HOM05D006793 ORTHO05D003476 3.5e-07 60.1 116 34.5
Medtr1g090853 Medicago truncatula HOM05D006793 ORTHO05D003476 4.6e-07 59.7 245 28.6
Sed0009649 Sechium edule HOM05D006793 ORTHO05D003476 7.9e-07 58.9 299 29.4
EL10Ac8g19653 Beta vulgaris HOM05D006793 ORTHO05D003476 1.0e-06 58.5 270 24.4
A03p48750 Brassica napus HOM05D006793 ORTHO05D003476 2.3e-06 57.4 84 39.3
Thhalv10010306m.g Eutrema salsugineum HOM05D006793 ORTHO05D003476 2.3e-06 57.4 287 28.6
BraA03t13975Z Brassica rapa HOM05D006793 ORTHO05D003476 3.0e-06 57.0 84 39.3
ClCG08G007950 Citrullus lanatus HOM05D006793 ORTHO05D003476 3.0e-06 57.0 207 32.4
AT3G52170 Arabidopsis thaliana HOM05D006793 ORTHO05D003476 3.9e-06 56.6 295 26.1


User provided reference genes

Program Settings