Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0050126 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D033925 6.6e-66 253.8 122 100.0
CSS0025918 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D007633 1.7e-13 79.7 40 92.5
Rhsim01G0123700 Rhododendron simsii HOM05D005955 ORTHO05D007633 1.8e-10 69.7 60 60.0
vmacro12691 Vaccinium macrocarpon HOM05D005955 ORTHO05D007633 3.3e-09 65.5 63 57.1
Dinv09262 Davidia involucrata HOM05D005955 ORTHO05D007633 4.3e-09 65.1 60 58.3
Hma1.2p1_1251F.1_g270440 Hydrangea macrophylla HOM05D005955 ORTHO05D007633 4.3e-09 65.1 60 56.7
Actinidia02255 Actinidia chinensis HOM05D005955 ORTHO05D007633 1.6e-08 63.2 40 77.5
TAR369G0753 Trochodendron aralioides HOM05D005955 ORTHO05D007633 1.6e-08 63.2 53 62.3
Glyma.11G154400 Glycine max HOM05D005955 ORTHO05D007633 8.1e-08 60.8 40 65.0
Lsat_1_v5_gn_1_114801 Lactuca sativa HOM05D005955 ORTHO05D007633 2.4e-07 59.3 41 63.4
Lsat_1_v5_gn_2_43661 Lactuca sativa HOM05D005955 ORTHO05D033925 6.9e-07 57.8 41 63.4
Manes.11G004000 Manihot esculenta HOM05D005955 ORTHO05D007633 6.9e-07 57.8 40 70.0
RcHm_v2.0_Chr1g0322011 Rosa chinensis HOM05D005955 ORTHO05D007633 6.9e-07 57.8 46 65.2
Ah.10g030640 Amaranthus hybridus HOM05D000390 ORTHO05D000577 9.0e-07 57.4 39 69.2
Psat5g219280 Pisum sativum HOM05D005955 ORTHO05D007633 9.0e-07 57.4 35 74.3
MD02G1290300 Malus domestica HOM05D005955 ORTHO05D007633 1.2e-06 57.0 46 60.9
Ca_27127_v3 Cicer arietinum L. HOM05D005955 ORTHO05D007633 1.5e-06 56.6 40 67.5
MBI13_g36285_MAGBIO Magnolia biondii HOM05D005955 ORTHO05D007633 2.0e-06 56.2 40 67.5
ClCG05G026720 Citrullus lanatus HOM05D005955 ORTHO05D007633 2.6e-06 55.8 40 67.5
TPR.G17810 Trifolium pratense HOM05D005955 ORTHO05D007633 2.6e-06 55.8 29 86.2
AUR62026845 Chenopodium quinoa HOM05D005955 ORTHO05D007633 3.4e-06 55.5 39 64.1
AUR62037203 Chenopodium quinoa HOM05D005955 ORTHO05D007633 3.4e-06 55.5 39 64.1
Haze_03068 Corylus avellana HOM05D005955 ORTHO05D007633 3.4e-06 55.5 58 51.7
FvH4_7g02750 Fragaria vesca HOM05D005955 ORTHO05D007633 3.4e-06 55.5 46 65.2
FAN06G1602 Fragaria x ananassa HOM05D005955 ORTHO05D007633 3.4e-06 55.5 46 65.2
Nitab4.5_0000320g0120 Nicotiana tabacum HOM05D005955 ORTHO05D007633 3.4e-06 55.5 40 65.0
EL10Ac2g02824 Beta vulgaris HOM05D005955 ORTHO05D007633 4.5e-06 55.1 39 64.1
Gohir.A03G127900 Gossypium hirsutum HOM05D005955 ORTHO05D033925 4.5e-06 55.1 42 64.3
Thecc.10G166400 Theobroma cacao HOM05D005955 ORTHO05D007633 4.5e-06 55.1 44 61.4
Cpa.g.sc223.13 Carica papaya HOM05D005955 ORTHO05D007633 5.8e-06 54.7 61 45.9
CiPaw.13G012200 Carya illinoinensis HOM05D005955 ORTHO05D007633 5.8e-06 54.7 55 54.5
CsaV3_5G036650 Cucumis sativus L. HOM05D005955 ORTHO05D007633 5.8e-06 54.7 40 65.0
Peaxi162Scf01732g00026 Petunia axillaris HOM05D005955 ORTHO05D007633 5.8e-06 54.7 41 63.4
QL04p014297 Quercus lobata HOM05D005955 ORTHO05D007633 5.8e-06 54.7 59 49.2
Sopen11g001560 Solanum pennellii HOM05D005955 ORTHO05D007633 5.8e-06 54.7 40 62.5
TWI63G0596 Tripterygium wilfordii HOM05D005955 ORTHO05D007633 5.8e-06 54.7 37 67.6
GSVIVG01000659001 Vitis vinifera HOM05D005955 ORTHO05D007633 5.8e-06 54.7 42 64.3
PGSC0003DMG401003979 Solanum tuberosum HOM05D005955 ORTHO05D007633 7.6e-06 54.3 40 62.5
Migut.N01795 Erythranthe guttata HOM05D005955 ORTHO05D007633 1.0e-05 53.9 54 51.9
Solyc11g005590.1 Solanum lycopersicum HOM05D005955 ORTHO05D007633 1.0e-05 53.9 41 61.0


User provided reference genes

Program Settings