Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0050100 Camellia sinensis var. sinensis HOM05D007365 ORTHO05D009309 1.1e-107 393.3 202 100.0
Rhsim13G0142400 Rhododendron simsii HOM05D007365 ORTHO05D009309 2.8e-53 212.6 203 63.5
Hma1.2p1_0657F.1_g196870 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 3.2e-49 199.1 208 57.7
Hma1.2p1_1963F.1_g309285 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 3.2e-49 199.1 208 57.7
Nn1g07480 Nelumbo nucifera HOM05D007365 ORTHO05D009309 5.6e-46 188.3 222 57.7
TWI63G0678 Tripterygium wilfordii HOM05D007365 ORTHO05D009309 1.8e-44 183.3 208 52.9
QL05p068234 Quercus lobata HOM05D007365 ORTHO05D009309 3.1e-44 182.6 209 55.0
Thecc.06G237900 Theobroma cacao HOM05D007365 ORTHO05D009309 1.5e-43 180.3 189 54.5
GSVIVG01003482001 Vitis vinifera HOM05D007365 ORTHO05D009309 2.9e-42 176.0 185 57.8
GSVIVG01004669001 Vitis vinifera HOM05D007365 ORTHO05D009309 3.8e-42 175.6 185 57.8
Oeu057031.1 Olea europaea HOM05D007365 ORTHO05D009309 4.9e-42 175.3 201 51.7
Duzib235G0282 Durio zibethinus HOM05D007365 ORTHO05D009309 6.4e-42 174.9 196 53.6
Aqoxy1G04233 Aquilegia oxysepala HOM05D007365 ORTHO05D009309 2.4e-41 172.9 202 53.5
TAR629G1651 Trochodendron aralioides HOM05D007365 ORTHO05D009309 1.2e-40 170.6 165 58.8
Haze_06998 Corylus avellana HOM05D007365 ORTHO05D009309 2.1e-40 169.9 205 52.7
Sabra06G0012500 Salix brachista HOM05D007365 ORTHO05D009309 1.3e-39 167.2 203 51.7
Lj2P258T31 Lonicera japonica HOM05D007365 ORTHO05D009309 1.7e-39 166.8 134 62.7
PSO017G7035 Papaver somniferum HOM05D007365 ORTHO05D009309 3.9e-39 165.6 161 58.4
Atru.chr1.2317 Acer truncatum HOM05D007365 ORTHO05D009309 8.7e-39 164.5 199 49.7
Gorai.010G189000 Gossypium raimondii HOM05D007365 ORTHO05D009309 1.1e-38 164.1 157 58.6
Cfa000056 Carpinus fangiana HOM05D007365 ORTHO05D009309 1.9e-38 163.3 186 52.7
PGR004G1025 Punica granatum HOM05D007365 ORTHO05D009309 2.5e-38 162.9 206 48.5
Gohir.D06G162000 Gossypium hirsutum HOM05D007365 ORTHO05D009309 1.3e-37 160.6 210 49.5
PSO170G2578 Papaver somniferum HOM05D007365 ORTHO05D009309 1.3e-37 160.6 161 57.1
Prupe.4G006400 Prunus persica HOM05D007365 ORTHO05D009309 1.6e-37 160.2 204 48.5
Manes.08G070500 Manihot esculenta HOM05D007365 ORTHO05D009309 2.1e-37 159.8 205 51.7
Potri.006G017500 Populus trichocarpa HOM05D007365 ORTHO05D009309 2.1e-37 159.8 210 47.1
Gohir.A06G155600 Gossypium hirsutum HOM05D007365 ORTHO05D009309 2.8e-37 159.5 113 72.6
Cc09_g00550 Coffea canephora HOM05D007365 ORTHO05D009309 3.6e-37 159.1 111 73.0
MD00G1057700 Malus domestica HOM05D007365 ORTHO05D009309 3.6e-37 159.1 198 48.0
CANSAT56G0830 Cannabis sativa HOM05D007365 ORTHO05D009309 1.1e-36 157.5 112 71.4
Ciclev10016816m.g Citrus clementina HOM05D007365 ORTHO05D009309 1.1e-36 157.5 187 48.7
FvH4_3g00530 Fragaria vesca HOM05D007365 ORTHO05D009309 3.1e-36 156.0 186 53.2
Lj4g0011771 Lotus japonicus HOM05D007365 ORTHO05D009309 3.1e-36 156.0 150 56.0
TPR.G5966 Trifolium pratense HOM05D007365 ORTHO05D009309 4.0e-36 155.6 108 73.1
Sc05g0009760 Simmondsia chinensis HOM05D007365 ORTHO05D009309 5.3e-36 155.2 179 52.0
Psat4g002120 Pisum sativum HOM05D007365 ORTHO05D009309 1.5e-35 153.7 182 50.5
CAN.G1156.8 Capsicum annuum HOM05D007365 ORTHO05D009309 2.0e-35 153.3 170 54.1
ECA248G3442 Erigeron canadensis HOM05D000864 ORTHO05D002353 2.0e-35 153.3 206 47.1
MSTRG.7141 Avicennia marina HOM05D007365 ORTHO05D009309 2.6e-35 152.9 203 48.8
FAN25G1820 Fragaria x ananassa HOM05D007365 ORTHO05D009309 2.6e-35 152.9 186 51.6
RcHm_v2.0_Chr5g0000731 Rosa chinensis HOM05D007365 ORTHO05D009309 2.6e-35 152.9 213 48.4
SGA_v2.0_scaffold7G03712 Striga asiatica HOM05D007365 ORTHO05D009309 4.4e-35 152.1 112 68.8
CiPaw.09G107000 Carya illinoinensis HOM05D007365 ORTHO05D009309 7.6e-35 151.4 191 53.4
MELO3C007446.2 Cucumis melo HOM05D007365 ORTHO05D009309 7.6e-35 151.4 113 65.5
Ah.14g087440 Amaranthus hybridus HOM05D007365 ORTHO05D009309 9.9e-35 151.0 201 46.8
FAN21G3283 Fragaria x ananassa HOM05D007365 ORTHO05D009309 9.9e-35 151.0 185 51.4
Glyma.17G007100 Glycine max HOM05D007365 ORTHO05D009309 9.9e-35 151.0 207 48.3
ClCG01G021340 Citrullus lanatus HOM05D007365 ORTHO05D009309 1.3e-34 150.6 190 48.9
HanXRQChr10g0285121 Helianthus annuus HOM05D007365 ORTHO05D009309 1.7e-34 150.2 218 48.6
Lalb_Chr07g0176961 Lupinus albus HOM05D007365 ORTHO05D009309 3.8e-34 149.1 203 47.8
PGSC0003DMG400013294 Solanum tuberosum HOM05D007365 ORTHO05D009309 3.8e-34 149.1 181 51.4
Cpa.g.sc1092.2 Carica papaya HOM05D007365 ORTHO05D009309 4.9e-34 148.7 197 47.2
VMungo1215G0355 Vigna mungo HOM05D007365 ORTHO05D009309 4.9e-34 148.7 149 55.0
Ca_21002_v3 Cicer arietinum L. HOM05D007365 ORTHO05D009309 1.4e-33 147.1 104 69.2
CsaV3_6G048350 Cucumis sativus L. HOM05D007365 ORTHO05D009309 1.9e-33 146.7 190 47.4
Dinv15365 Davidia involucrata HOM05D007365 ORTHO05D009309 1.9e-33 146.7 100 76.0
Nitab4.5_0001668g0010 Nicotiana tabacum HOM05D007365 ORTHO05D009309 1.9e-33 146.7 205 48.3
Phvul.003G085500 Phaseolus vulgaris HOM05D007365 ORTHO05D009309 1.9e-33 146.7 150 54.7
THA.LOC104814483 Tarenaya hassleriana HOM05D007365 ORTHO05D009309 3.2e-33 146.0 117 62.4
Solyc11g012640.1 Solanum lycopersicum HOM05D007365 ORTHO05D009309 4.2e-33 145.6 181 50.3
AT4G16410 Arabidopsis thaliana HOM05D007365 ORTHO05D009309 5.4e-33 145.2 174 52.9
Sopen11g007370 Solanum pennellii HOM05D007365 ORTHO05D009309 5.4e-33 145.2 181 50.8
Medtr4g133770 Medicago truncatula HOM05D007365 ORTHO05D009309 7.1e-33 144.8 205 47.8
ATR0624G051 Amborella trichopoda HOM05D007365 ORTHO05D009309 9.3e-33 144.4 158 51.3
CARHR222780 Cardamine hirsuta HOM05D007365 ORTHO05D009309 1.2e-32 144.1 192 47.4
Hma1.2p1_0657F.1_g196860 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 1.2e-32 144.1 100 74.0
unitig_37.g12181 Utricularia gibba HOM05D007365 ORTHO05D009309 1.2e-32 144.1 165 49.7
MBI19_g37436_MAGBIO Magnolia biondii HOM05D007365 ORTHO05D009309 1.6e-32 143.7 190 45.8
TAR629G0160 Trochodendron aralioides HOM05D007365 ORTHO05D009309 2.1e-32 143.3 89 79.8
Carub.0007s2512 Capsella rubella HOM05D007365 ORTHO05D009309 4.6e-32 142.1 161 50.9
AL7G38600 Arabidopsis lyrata HOM05D007365 ORTHO05D009309 7.8e-32 141.4 136 57.4
Thhalv10026910m.g Eutrema salsugineum HOM05D007365 ORTHO05D009309 7.8e-32 141.4 182 48.4
Migut.M01433 Erythranthe guttata HOM05D007365 ORTHO05D009309 1.3e-31 140.6 172 51.2
Sed0008513 Sechium edule HOM05D007365 ORTHO05D009309 1.3e-31 140.6 203 44.3
A03p49790 Brassica napus HOM05D007365 ORTHO05D009309 1.7e-31 140.2 175 50.3
BraA03t14074Z Brassica rapa HOM05D007365 ORTHO05D009309 1.7e-31 140.2 175 50.3
Sp7g14940 Schrenkiella parvula HOM05D007365 ORTHO05D009309 1.7e-31 140.2 111 64.0
Lsat_1_v5_gn_1_129921 Lactuca sativa HOM05D007365 ORTHO05D009309 8.7e-31 137.9 207 47.8
C07p47850 Brassica napus HOM05D007365 ORTHO05D009309 1.1e-30 137.5 176 50.0
HPP92_007730 Vanilla planifolia HOM05D007365 ORTHO05D009309 1.1e-30 137.5 195 44.1
Eucgr.L00170 Eucalyptus grandis HOM05D007365 ORTHO05D009309 1.5e-30 137.1 207 45.4
EL10Ac8g20243 Beta vulgaris HOM05D007365 ORTHO05D009309 1.9e-30 136.7 104 68.3
BolC7t45307H Brassica oleracea HOM05D007365 ORTHO05D009309 1.9e-30 136.7 178 49.4
Eucgr.D01449 Eucalyptus grandis HOM05D007365 ORTHO05D009309 2.5e-30 136.3 122 63.9
Eucgr.D01445 Eucalyptus grandis HOM05D007365 ORTHO05D009309 4.3e-30 135.6 207 44.9
Actinidia02294 Actinidia chinensis HOM05D007365 ORTHO05D009309 9.6e-30 134.4 207 46.4
Zm00001eb280810 Zea mays HOM05D007365 ORTHO05D009309 1.6e-29 133.7 107 64.5
Zm00001eb380530 Zea mays HOM05D007365 ORTHO05D009309 3.6e-29 132.5 107 65.4
DCAR_030849 Daucus carota HOM05D007365 ORTHO05D009309 6.9e-28 128.3 91 68.1
BraA01t02028Z Brassica rapa HOM05D007365 ORTHO05D009309 5.8e-27 125.2 99 63.6
CDE02G4560 Ceratophyllum demersum HOM05D007365 ORTHO05D009309 9.9e-27 124.4 173 45.7
Peaxi162Scf00008g00111 Petunia axillaris HOM05D007365 ORTHO05D009309 2.1e-24 116.7 72 81.9
Glyma.07G267200 Glycine max HOM05D007365 ORTHO05D009309 6.0e-24 115.2 165 46.7
SEGI_39039 Sequoiadendron giganteum HOM05D007365 ORTHO05D009309 7.9e-24 114.8 112 52.7
Os07g0607200 Oryza sativa ssp. japonica HOM05D007365 ORTHO05D009309 2.3e-23 113.2 75 72.0
Mapoly0009s0214 Marchantia polymorpha HOM05D007365 ORTHO05D009309 5.6e-22 108.6 84 53.6
Pp3c8_24380 Physcomitrium patens HOM05D007365 ORTHO05D009309 1.1e-20 104.4 147 40.1
BcaNung00199 Brassica carinata HOM05D007365 ORTHO05D009309 4.0e-20 102.4 160 41.2
C01p26480 Brassica napus HOM05D002647 ORTHO05D032546 6.9e-20 101.7 112 50.9
BcaC09g50340 Brassica carinata HOM05D007365 ORTHO05D009309 1.2e-19 100.9 88 58.0
Aa31LG2G12470 Aethionema arabicum HOM05D002647 ORTHO05D000003 1.0e-18 97.8 147 42.9
CBR_g31098 Chara braunii HOM05D000019 ORTHO05D000048 2.9e-18 96.3 89 51.7
MD10G1337000 Malus domestica HOM05D007365 ORTHO05D009309 1.1e-14 84.3 64 62.5
CsaV3_2G014000 Cucumis sativus L. HOM05D007365 ORTHO05D009309 4.6e-08 62.4 30 90.0
A01p21190 Brassica napus HOM05D007365 ORTHO05D009309 6.7e-07 58.5 99 40.4
MELO3C035474.2 Cucumis melo HOM05D007365 ORTHO05D009309 1.9e-06 57.0 44 63.6


User provided reference genes

Program Settings