Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0050093 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.5e-108 396.4 224 100.0
CSS0005428 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.7e-56 223.4 184 78.3
CSS0027719 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.1e-50 204.1 196 67.9
CSS0025712 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 4.6e-41 172.2 195 64.1
CSS0009426 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 7.7e-12 75.1 43 81.4
CSS0038075 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.0e-11 74.7 43 81.4
CSS0010680 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 6.5e-11 72.0 43 79.1
CSS0040342 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 6.5e-11 72.0 43 79.1
CSS0044845 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 3.2e-10 69.7 39 79.5
CSS0039380 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 5.5e-10 68.9 43 76.7
PSO063G6922 Papaver somniferum HOM05D000034 ORTHO05D000037 2.7e-09 66.6 47 66.0
PSO210G4967 Papaver somniferum HOM05D000034 ORTHO05D000037 2.7e-09 66.6 47 66.0
PSO210G6866 Papaver somniferum HOM05D000034 ORTHO05D000037 2.7e-09 66.6 47 66.0
Lj3g0012091 Lotus japonicus HOM05D000034 ORTHO05D000037 3.6e-09 66.2 105 41.9
PSO170G2012 Papaver somniferum HOM05D000034 ORTHO05D000037 4.6e-09 65.9 47 66.0
PSO386G0107 Papaver somniferum HOM05D000034 ORTHO05D000037 4.6e-09 65.9 47 66.0
PSO675G0791 Papaver somniferum HOM05D000034 ORTHO05D000037 4.6e-09 65.9 47 66.0
PSO700G0240 Papaver somniferum HOM05D000034 ORTHO05D000037 4.6e-09 65.9 47 66.0
TAR331G0001 Trochodendron aralioides HOM05D000034 ORTHO05D000037 4.6e-09 65.9 95 41.1
RcHm_v2.0_Chr1g0354781 Rosa chinensis HOM05D000034 ORTHO05D000037 7.9e-09 65.1 41 73.2
Lj3g0012180 Lotus japonicus HOM05D000034 ORTHO05D000037 1.0e-08 64.7 101 43.6
CANSAT01G2546 Cannabis sativa HOM05D000034 ORTHO05D000037 1.4e-08 64.3 48 64.6
CANSAT25G1613 Cannabis sativa HOM05D000034 ORTHO05D000037 1.4e-08 64.3 48 64.6
Lj1g0002194 Lotus japonicus HOM05D000034 ORTHO05D000037 1.4e-08 64.3 63 52.4
PSO724G0660 Papaver somniferum HOM05D000034 ORTHO05D000037 1.4e-08 64.3 47 63.8
CANSAT25G1047 Cannabis sativa HOM05D000034 ORTHO05D000037 1.8e-08 63.9 55 60.0
CANSAT25G2314 Cannabis sativa HOM05D000034 ORTHO05D000037 1.8e-08 63.9 55 60.0
CANSAT54G1197 Cannabis sativa HOM05D000034 ORTHO05D000037 1.8e-08 63.9 55 60.0
CANSAT54G2552 Cannabis sativa HOM05D000034 ORTHO05D000037 1.8e-08 63.9 55 60.0
Aqoxy4G01435 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 2.3e-08 63.5 55 60.0
Aqoxy7G02664 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 2.3e-08 63.5 55 60.0
CANSAT80G2513 Cannabis sativa HOM05D000034 ORTHO05D000037 3.9e-08 62.8 37 75.7
PSO017G6287 Papaver somniferum HOM05D000034 ORTHO05D000037 5.1e-08 62.4 47 63.8
CANSAT01G0970 Cannabis sativa HOM05D000034 ORTHO05D000037 6.7e-08 62.0 55 58.2
CANSAT21G1727 Cannabis sativa HOM05D000034 ORTHO05D000037 6.7e-08 62.0 41 68.3
SHI14674 Sapria himalayana HOM05D000034 ORTHO05D000037 6.7e-08 62.0 42 57.1
CSS0001522 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.1e-07 61.2 56 57.1
CSS0002925 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.1e-07 61.2 56 57.1
CSS0009060 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.1e-07 61.2 56 57.1
CSS0010359 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.1e-07 61.2 56 57.1
CSS0037429 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.1e-07 61.2 56 57.1
AUR62037954 Chenopodium quinoa HOM05D000034 ORTHO05D000037 1.1e-07 61.2 60 55.0
LjContig00141g0023111 Lotus japonicus HOM05D000034 ORTHO05D000037 1.1e-07 61.2 144 30.6
TWI09G0723 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 1.1e-07 61.2 46 63.0
TWI73G1226 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 1.1e-07 61.2 43 67.4
TWI74G1293 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 1.1e-07 61.2 43 67.4
MBI19_g00241_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 1.5e-07 60.8 54 51.9
arahy.Tifrunner.gnm1.ann1.8AJD73 Arachis hypogaea HOM05D000034 ORTHO05D000037 2.0e-07 60.5 42 64.3
arahy.Tifrunner.gnm1.ann1.MPB7DX Arachis hypogaea HOM05D000034 ORTHO05D000037 2.0e-07 60.5 61 54.1
CSS0041691 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 2.0e-07 60.5 44 63.6
PSO832G2050 Papaver somniferum HOM05D000034 ORTHO05D000037 2.0e-07 60.5 47 61.7
Prupe.1G096200 Prunus persica HOM05D000034 ORTHO05D000037 2.0e-07 60.5 135 32.6
Atru.chr10.353 Acer truncatum HOM05D000034 ORTHO05D000037 2.6e-07 60.1 47 59.6
CSS0015900 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 2.6e-07 60.1 44 63.6
CANSAT11G1962 Cannabis sativa HOM05D000034 ORTHO05D000037 2.6e-07 60.1 55 56.4
CANSAT64G2284 Cannabis sativa HOM05D000034 ORTHO05D000037 2.6e-07 60.1 39 69.2
TWI38G1947 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 2.6e-07 60.1 46 63.0
arahy.Tifrunner.gnm1.ann1.RU9D2T Arachis hypogaea HOM05D000034 ORTHO05D000037 3.3e-07 59.7 35 74.3
CANSAT64G1448 Cannabis sativa HOM05D000034 ORTHO05D000037 3.3e-07 59.7 66 51.5
Atru.chr5.2512 Acer truncatum HOM05D000034 ORTHO05D000037 4.4e-07 59.3 41 68.3
Aqoxy5G02543 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 4.4e-07 59.3 39 64.1
arahy.Tifrunner.gnm1.ann1.650AVT Arachis hypogaea HOM05D000034 ORTHO05D000037 4.4e-07 59.3 58 55.2
CANSAT01G1210 Cannabis sativa HOM05D000034 ORTHO05D000037 4.4e-07 59.3 41 65.9
MELO3C034964.2 Cucumis melo HOM05D000034 ORTHO05D000037 4.4e-07 59.3 45 64.4
TWI12G0430 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 4.4e-07 59.3 43 67.4
CSS0001254 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 5.7e-07 58.9 44 63.6
CSS0041293 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 5.7e-07 58.9 56 55.4
TWI60G0194 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 5.7e-07 58.9 46 60.9
arahy.Tifrunner.gnm1.ann1.FCT25S Arachis hypogaea HOM05D000034 ORTHO05D000037 7.4e-07 58.5 61 52.5
Aqoxy7G01723 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 9.7e-07 58.2 48 56.2
Aqoxy7G02254 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 9.7e-07 58.2 46 56.5
ECA238G2489 Erigeron canadensis HOM05D000034 ORTHO05D000037 9.7e-07 58.2 83 42.2
QL02p080045 Quercus lobata HOM05D000034 ORTHO05D000037 9.7e-07 58.2 41 61.0
TWI23G0349 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 9.7e-07 58.2 46 60.9
Atru.chr4.1236 Acer truncatum HOM05D000034 ORTHO05D000037 1.3e-06 57.8 41 65.9
arahy.Tifrunner.gnm1.ann1.NHZ1NU Arachis hypogaea HOM05D000034 ORTHO05D000037 1.3e-06 57.8 61 52.5
Oeu052615.1 Olea europaea HOM05D000034 ORTHO05D000037 1.3e-06 57.8 78 43.6
QL02p021656 Quercus lobata HOM05D000034 ORTHO05D000037 1.3e-06 57.8 47 66.0
QL09p005462 Quercus lobata HOM05D000034 ORTHO05D000037 1.3e-06 57.8 47 66.0
TWI75G1793 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 1.3e-06 57.8 45 57.8
TWI75G1861 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 1.3e-06 57.8 45 57.8
TWI81G0533 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 1.3e-06 57.8 45 57.8
Aqoxy2G01242 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 1.7e-06 57.4 37 64.9
Aqoxy5G02246 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 1.7e-06 57.4 37 64.9
arahy.Tifrunner.gnm1.ann1.EQ53E4 Arachis hypogaea HOM05D000034 ORTHO05D000037 1.7e-06 57.4 35 74.3
arahy.Tifrunner.gnm1.ann1.ES6UTP Arachis hypogaea HOM05D000034 ORTHO05D000037 1.7e-06 57.4 35 74.3
arahy.Tifrunner.gnm1.ann1.F8S6LB Arachis hypogaea HOM05D000034 ORTHO05D000037 1.7e-06 57.4 61 50.8
arahy.Tifrunner.gnm1.ann1.H0SGIW Arachis hypogaea HOM05D000034 ORTHO05D000037 1.7e-06 57.4 35 74.3
arahy.Tifrunner.gnm1.ann1.HQ0KDL Arachis hypogaea HOM05D000034 ORTHO05D000037 1.7e-06 57.4 35 74.3
arahy.Tifrunner.gnm1.ann1.S3JL1H Arachis hypogaea HOM05D000034 ORTHO05D000037 1.7e-06 57.4 35 74.3
arahy.Tifrunner.gnm1.ann1.UA7YVD Arachis hypogaea HOM05D000034 ORTHO05D002688 1.7e-06 57.4 35 74.3
Hma1.2p1_0358F.1_g134740 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.7e-06 57.4 43 60.5
Oeu011781.1 Olea europaea HOM05D000034 ORTHO05D000037 1.7e-06 57.4 49 57.1
Oeu015491.1 Olea europaea HOM05D000034 ORTHO05D000037 1.7e-06 57.4 49 57.1
arahy.Tifrunner.gnm1.ann1.B6EI28 Arachis hypogaea HOM05D000034 ORTHO05D000037 2.2e-06 57.0 61 50.8
CSS0004838 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 2.2e-06 57.0 56 53.6
ECA232G1773 Erigeron canadensis HOM05D000034 ORTHO05D000037 2.2e-06 57.0 83 41.0
FvH4_1g10461 Fragaria vesca HOM05D000034 ORTHO05D000037 2.2e-06 57.0 54 51.9
Oeu017244.1 Olea europaea HOM05D000034 ORTHO05D000037 2.2e-06 57.0 58 51.7
PGR083G1397 Punica granatum HOM05D000034 ORTHO05D000037 2.2e-06 57.0 41 63.4
PGR142G3889 Punica granatum HOM05D000034 ORTHO05D000037 2.2e-06 57.0 41 63.4
QL01p050021 Quercus lobata HOM05D000034 ORTHO05D000037 2.2e-06 57.0 54 57.4
Duzib187G1082 Durio zibethinus HOM05D000034 ORTHO05D000037 2.8e-06 56.6 35 71.4
HanXRQChr12g0382961 Helianthus annuus HOM05D000034 ORTHO05D000037 2.8e-06 56.6 83 43.4
MBI16_g14986_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 2.8e-06 56.6 41 61.0
Oeu043425.1 Olea europaea HOM05D000034 ORTHO05D000037 2.8e-06 56.6 49 55.1
PSO782G2923 Papaver somniferum HOM05D000034 ORTHO05D000037 2.8e-06 56.6 39 64.1
Rhsim11G0185300 Rhododendron simsii HOM05D000034 ORTHO05D000037 2.8e-06 56.6 37 70.3
Rhsim12G0067000 Rhododendron simsii HOM05D000034 ORTHO05D000037 2.8e-06 56.6 37 70.3
SHI27191 Sapria himalayana HOM05D000034 ORTHO05D000037 2.8e-06 56.6 58 46.6
Aqoxy1G02789 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 3.7e-06 56.2 37 62.2
CANSAT80G1286 Cannabis sativa HOM05D000034 ORTHO05D000037 3.7e-06 56.2 59 54.2
ECA232G0123 Erigeron canadensis HOM05D000034 ORTHO05D000037 3.7e-06 56.2 54 55.6
ECA246G0804 Erigeron canadensis HOM05D006295 ORTHO05D008061 3.7e-06 56.2 37 64.9
FvH4_2g13361 Fragaria vesca HOM05D000034 ORTHO05D000037 3.7e-06 56.2 54 51.9
FvH4_3g29911 Fragaria vesca HOM05D000034 ORTHO05D000037 3.7e-06 56.2 54 51.9
MBI14_g17384_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 3.7e-06 56.2 45 55.6
MBI19_g18847_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 3.7e-06 56.2 43 58.1
PSO017G3336 Papaver somniferum HOM05D000034 ORTHO05D000037 3.7e-06 56.2 58 50.0
PSO541G4587 Papaver somniferum HOM05D000034 ORTHO05D000037 3.7e-06 56.2 58 50.0
QL08p024725 Quercus lobata HOM05D000034 ORTHO05D000037 3.7e-06 56.2 45 64.4
arahy.Tifrunner.gnm1.ann1.DIK1RJ Arachis hypogaea HOM05D000034 ORTHO05D000037 4.8e-06 55.8 47 59.6
arahy.Tifrunner.gnm1.ann1.H7NW57 Arachis hypogaea HOM05D000034 ORTHO05D000037 4.8e-06 55.8 35 71.4
CANSAT54G1366 Cannabis sativa HOM05D000034 ORTHO05D000285 4.8e-06 55.8 51 54.9
CANSAT78G0128 Cannabis sativa HOM05D000034 ORTHO05D000037 4.8e-06 55.8 48 58.3
FvH4_2g04530 Fragaria vesca HOM05D000034 ORTHO05D000037 4.8e-06 55.8 53 52.8
FvH4_2g11121 Fragaria vesca HOM05D000034 ORTHO05D000037 4.8e-06 55.8 53 52.8
Lj1g0000815 Lotus japonicus HOM05D000034 ORTHO05D000037 4.8e-06 55.8 30 83.3
Lj1g0025151 Lotus japonicus HOM05D000034 ORTHO05D000037 4.8e-06 55.8 30 83.3
Lj3g0002528 Lotus japonicus HOM05D000034 ORTHO05D000037 4.8e-06 55.8 30 83.3
Lj3g0023510 Lotus japonicus HOM05D000034 ORTHO05D000037 4.8e-06 55.8 30 83.3
MBI03_g22538_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 4.8e-06 55.8 82 37.8
MBI08_g00970_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 4.8e-06 55.8 56 46.4
MBI18_g01503_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 4.8e-06 55.8 56 48.2
Oeu052246.1 Olea europaea HOM05D000034 ORTHO05D000037 4.8e-06 55.8 46 54.3
Oeu063760.1 Olea europaea HOM05D000034 ORTHO05D000037 4.8e-06 55.8 61 49.2
SHI20335 Sapria himalayana HOM05D000034 ORTHO05D000037 4.8e-06 55.8 47 55.3
TWI79G1493 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 4.8e-06 55.8 35 68.6
Aqoxy1G03317 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 6.3e-06 55.5 35 68.6
Aqoxy2G02168 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 6.3e-06 55.5 35 68.6
arahy.Tifrunner.gnm1.ann1.55DRF4 Arachis hypogaea HOM05D000034 ORTHO05D000037 6.3e-06 55.5 61 50.8
Hma1.2p1_0296F.1_g116800 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 6.3e-06 55.5 35 68.6
Oeu046621.1 Olea europaea HOM05D000034 ORTHO05D000037 6.3e-06 55.5 78 42.3
PGR042G2378 Punica granatum HOM05D000034 ORTHO05D000037 6.3e-06 55.5 41 63.4
arahy.Tifrunner.gnm1.ann1.48C0A1 Arachis hypogaea HOM05D000034 ORTHO05D000037 8.2e-06 55.1 30 80.0
arahy.Tifrunner.gnm1.ann1.HK1YN3 Arachis hypogaea HOM05D000034 ORTHO05D000037 8.2e-06 55.1 29 82.8
arahy.Tifrunner.gnm1.ann1.V5K3GS Arachis hypogaea HOM05D000034 ORTHO05D000037 8.2e-06 55.1 29 82.8
Hma1.2p1_0000F.1_g000130 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 8.2e-06 55.1 61 49.2
Hma1.2p1_0006F.1_g004960 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 8.2e-06 55.1 61 49.2
Hma1.2p1_0071F.1_g037930 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 8.2e-06 55.1 61 49.2
Hma1.2p1_1250F.1_g270290 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 8.2e-06 55.1 61 49.2
MBI10_g03022_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 8.2e-06 55.1 45 55.6
Nn8g39113 Nelumbo nucifera HOM05D000034 ORTHO05D000037 8.2e-06 55.1 48 56.2
QL10p013157 Quercus lobata HOM05D000034 ORTHO05D000037 8.2e-06 55.1 41 58.5


User provided reference genes

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