Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0050081 Camellia sinensis var. sinensis HOM05D007775 ORTHO05D009858 3.8e-66 254.6 121 100.0
CSS0035717 Camellia sinensis var. sinensis HOM05D007775 ORTHO05D009858 1.4e-63 246.1 120 96.7
CSS0036115 Camellia sinensis var. sinensis HOM05D007775 ORTHO05D009858 4.4e-62 241.1 120 95.8
Dinv38311 Davidia involucrata HOM05D007775 ORTHO05D009858 2.3e-31 139.0 88 70.5
Cfa015361 Carpinus fangiana HOM05D007775 ORTHO05D009858 3.4e-30 135.2 84 71.4
Actinidia40242 Actinidia chinensis HOM05D007775 ORTHO05D009858 4.4e-30 134.8 82 74.4
Rhsim04G0218300 Rhododendron simsii HOM05D007775 ORTHO05D009858 7.5e-30 134.0 81 76.5
Haze_01245 Corylus avellana HOM05D007775 ORTHO05D009858 1.3e-29 133.3 83 71.1
TAR362G1316 Trochodendron aralioides HOM05D007775 ORTHO05D009858 1.8e-28 129.4 82 69.5
CiPaw.02G085200 Carya illinoinensis HOM05D007775 ORTHO05D009858 2.3e-26 122.5 83 69.9
PSO210G6602 Papaver somniferum HOM05D007775 ORTHO05D009858 2.3e-26 122.5 84 65.5
MBI19_g01943_MAGBIO Magnolia biondii HOM05D007775 ORTHO05D009858 3.0e-26 122.1 81 66.7
Atru.chr4.2786 Acer truncatum HOM05D007775 ORTHO05D009858 3.9e-26 121.7 94 57.4
Oeu021116.1 Olea europaea HOM05D007775 ORTHO05D009858 5.0e-26 121.3 82 63.4
ATR0706G202 Amborella trichopoda HOM05D007775 ORTHO05D009858 1.5e-25 119.8 87 60.9
CANSAT78G0244 Cannabis sativa HOM05D007775 ORTHO05D009858 1.5e-25 119.8 80 67.5
PGR031G0649 Punica granatum HOM05D007775 ORTHO05D009858 2.5e-25 119.0 89 60.7
Duzib151G1205 Durio zibethinus HOM05D007775 ORTHO05D009858 3.3e-25 118.6 82 62.2
Potri.008G215200 Populus trichocarpa HOM05D007775 ORTHO05D009858 1.2e-24 116.7 91 61.5
QL06p007731 Quercus lobata HOM05D007775 ORTHO05D009858 1.2e-24 116.7 84 65.5
vmacro08108 Vaccinium macrocarpon HOM05D007775 ORTHO05D009858 1.2e-24 116.7 72 70.8
Prupe.1G140100 Prunus persica HOM05D007775 ORTHO05D009858 1.6e-24 116.3 81 64.2
COL.COLO4_13909 Corchorus olitorius HOM05D007775 ORTHO05D009858 2.1e-24 115.9 88 61.4
Ciclev10005542m.g Citrus clementina HOM05D007775 ORTHO05D009858 3.6e-24 115.2 82 63.4
FAN07G2931 Fragaria x ananassa HOM05D007775 ORTHO05D009858 3.6e-24 115.2 81 63.0
RcHm_v2.0_Chr4g0421471 Rosa chinensis HOM05D007775 ORTHO05D009858 1.0e-23 113.6 81 61.7
Gohir.D10G168200 Gossypium hirsutum HOM05D007775 ORTHO05D009858 1.4e-23 113.2 85 61.2
arahy.Tifrunner.gnm1.ann1.J8QG6N Arachis hypogaea HOM05D007775 ORTHO05D009858 1.8e-23 112.8 79 63.3
Gorai.011G187800 Gossypium raimondii HOM05D007775 ORTHO05D009858 1.8e-23 112.8 88 58.0
TWI09G0118 Tripterygium wilfordii HOM05D007775 ORTHO05D009858 1.8e-23 112.8 77 66.2
arahy.Tifrunner.gnm1.ann1.KJPE0P Arachis hypogaea HOM05D007775 ORTHO05D009858 2.3e-23 112.5 79 63.3
ClCG06G005300 Citrullus lanatus HOM05D007775 ORTHO05D009858 3.1e-23 112.1 84 59.5
FvH4_4g17570 Fragaria vesca HOM05D007775 ORTHO05D009858 3.1e-23 112.1 81 60.5
FAN12G2546 Fragaria x ananassa HOM05D007775 ORTHO05D009858 3.1e-23 112.1 81 60.5
Cc03_g02150 Coffea canephora HOM05D007775 ORTHO05D009858 4.0e-23 111.7 84 59.5
Lj6A671T60 Lonicera japonica HOM05D007775 ORTHO05D009858 5.2e-23 111.3 77 67.5
Thecc.04G279800 Theobroma cacao HOM05D007775 ORTHO05D009858 1.2e-22 110.2 80 61.2
Nitab4.5_0002148g0040 Nicotiana tabacum HOM05D007775 ORTHO05D009858 1.5e-22 109.8 86 60.5
MELO3C021348.2 Cucumis melo HOM05D007775 ORTHO05D009858 3.4e-22 108.6 84 58.3
Peaxi162Scf00033g01324 Petunia axillaris HOM05D007775 ORTHO05D009858 3.4e-22 108.6 83 61.4
GSVIVG01017782001 Vitis vinifera HOM05D007775 ORTHO05D009858 3.4e-22 108.6 83 62.7
Eucgr.B01278 Eucalyptus grandis HOM05D007775 ORTHO05D009858 4.4e-22 108.2 85 60.0
Sed0017003 Sechium edule HOM05D007775 ORTHO05D009858 4.4e-22 108.2 86 54.7
Lsat_1_v5_gn_5_52881 Lactuca sativa HOM05D007775 ORTHO05D009858 7.5e-22 107.5 90 52.2
CAN.G256.16 Capsicum annuum HOM05D007775 ORTHO05D009858 9.8e-22 107.1 81 63.0
Manes.15G015200 Manihot esculenta HOM05D007775 ORTHO05D009858 9.8e-22 107.1 80 65.0
Sabra08G0155600 Salix brachista HOM05D007775 ORTHO05D009858 9.8e-22 107.1 77 66.2
Solyc06g054580.4 Solanum lycopersicum HOM05D007775 ORTHO05D009858 1.3e-21 106.7 83 60.2
CsaV3_6G017340 Cucumis sativus L. HOM05D007775 ORTHO05D009858 1.7e-21 106.3 84 57.1
Lalb_Chr13g0303771 Lupinus albus HOM05D007775 ORTHO05D009858 1.7e-21 106.3 76 61.8
Nitab4.5_0001459g0060 Nicotiana tabacum HOM05D007775 ORTHO05D009858 2.9e-21 105.5 82 62.2
Gohir.A10G161700 Gossypium hirsutum HOM05D007775 ORTHO05D009858 3.7e-21 105.1 84 59.5
Sc06g0007440 Simmondsia chinensis HOM05D007775 ORTHO05D009858 3.7e-21 105.1 77 64.9
Sopen06g019650 Solanum pennellii HOM05D007775 ORTHO05D009858 8.3e-21 104.0 83 59.0
PGSC0003DMG400030783 Solanum tuberosum HOM05D007775 ORTHO05D009858 8.3e-21 104.0 83 59.0
HanXRQChr03g0080871 Helianthus annuus HOM05D007775 ORTHO05D009858 1.4e-20 103.2 85 55.3
Cpa.g.sc197.12 Carica papaya HOM05D007775 ORTHO05D009858 1.9e-20 102.8 83 57.8
Nn3g16301 Nelumbo nucifera HOM05D007775 ORTHO05D009858 3.2e-20 102.1 99 46.5
ECA240G4119 Erigeron canadensis HOM05D007775 ORTHO05D009858 5.4e-20 101.3 85 52.9
MD13G1171700 Malus domestica HOM05D007775 ORTHO05D009858 2.0e-19 99.4 80 58.8
THA.LOC104820248 Tarenaya hassleriana HOM05D007775 ORTHO05D009858 3.5e-19 98.6 89 49.4
QL06p007898 Quercus lobata HOM05D007775 ORTHO05D009858 1.3e-18 96.7 79 60.8
Aa31LG5G20500 Aethionema arabicum HOM05D007775 ORTHO05D009858 3.9e-18 95.1 83 53.0
Ah.13g074550 Amaranthus hybridus HOM05D007775 ORTHO05D009858 1.1e-17 93.6 78 56.4
AL4G36400 Arabidopsis lyrata HOM05D007775 ORTHO05D009858 1.5e-17 93.2 83 51.8
AT2G39100 Arabidopsis thaliana HOM05D007775 ORTHO05D009858 3.3e-17 92.0 82 52.4
CARHR133870 Cardamine hirsuta HOM05D007775 ORTHO05D009858 4.3e-17 91.7 76 53.9
BraA04t18439Z Brassica rapa HOM05D007775 ORTHO05D009858 5.6e-17 91.3 87 48.3
Sp4g21450 Schrenkiella parvula HOM05D007775 ORTHO05D009858 1.2e-16 90.1 84 51.2
Thhalv10017000m.g Eutrema salsugineum HOM05D007775 ORTHO05D009858 1.6e-16 89.7 84 51.2
C04p67030 Brassica napus HOM05D007775 ORTHO05D009858 4.7e-16 88.2 87 46.0
BolC4t28205H Brassica oleracea HOM05D007775 ORTHO05D009858 4.7e-16 88.2 87 46.0
Carub.0004s2115 Capsella rubella HOM05D007775 ORTHO05D009858 4.7e-16 88.2 82 48.8
Prupe.8G004900 Prunus persica HOM05D007775 ORTHO05D009858 5.8e-14 81.3 54 66.7
SEGI_15450 Sequoiadendron giganteum HOM05D007775 ORTHO05D009858 3.7e-13 78.6 82 43.9
AL92U10060 Arabidopsis lyrata HOM05D007775 ORTHO05D009858 5.4e-12 74.7 73 49.3
DCAR_024553 Daucus carota HOM05D007775 ORTHO05D009858 7.1e-12 74.3 53 54.7
A04p29770 Brassica napus HOM05D007775 ORTHO05D009858 2.1e-11 72.8 65 50.8
Aqoxy2G03074 Aquilegia oxysepala HOM05D007775 ORTHO05D009858 4.3e-09 65.1 50 60.0
SMO147G0036 Selaginella moellendorffii HOM05D007775 ORTHO05D009858 2.8e-08 62.4 86 40.7
Pp3c21_11960 Physcomitrium patens HOM05D007775 ORTHO05D009858 8.9e-07 57.4 104 28.8


User provided reference genes

Program Settings