Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0050077 Camellia sinensis var. sinensis HOM05D060018 ORTHO05D000004 2.2e-76 288.9 143 100.0
CSS0016554 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 6.4e-28 127.9 171 49.7
CSS0042725 Camellia sinensis var. sinensis HOM05D060018 ORTHO05D110637 2.6e-21 105.9 132 47.0
CSS0015339 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 7.8e-18 94.4 268 33.2
CSS0004038 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.3e-17 93.6 187 37.4
CSS0046528 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 8.1e-15 84.3 53 79.2
CSS0031199 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 6.8e-14 81.3 67 61.2
QL08p028067 Quercus lobata HOM05D000003 ORTHO05D000004 3.4e-13 79.0 115 42.6
CSS0000625 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.7e-12 76.6 67 58.2
CSS0030642 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.7e-12 76.6 67 58.2
QL01p050350 Quercus lobata HOM05D000003 ORTHO05D000004 1.7e-12 76.6 186 33.3
QL02p036859 Quercus lobata HOM05D000003 ORTHO05D000004 1.7e-12 76.6 169 33.1
QL02p028186 Quercus lobata HOM05D000003 ORTHO05D000006 3.7e-12 75.5 146 36.3
CSS0020053 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 8.3e-12 74.3 54 66.7
QL12p033243 Quercus lobata HOM05D000329 ORTHO05D000833 2.4e-11 72.8 54 64.8
CSS0030187 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.1e-11 72.0 50 70.0
CSS0002024 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 5.4e-11 71.6 215 31.6
CSS0019159 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 9.2e-11 70.9 50 68.0
CSS0022232 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 9.2e-11 70.9 276 27.5
QL07p016620 Quercus lobata HOM05D000003 ORTHO05D000004 1.2e-10 70.5 170 31.2
QL09p047247 Quercus lobata HOM05D000003 ORTHO05D001231 1.2e-10 70.5 54 64.8
CSS0039063 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.6e-10 70.1 53 64.2
QL05p086823 Quercus lobata HOM05D000003 ORTHO05D000004 2.1e-10 69.7 54 61.1
QL12p026404 Quercus lobata HOM05D000003 ORTHO05D000004 2.1e-10 69.7 54 61.1
CSS0028435 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.7e-10 69.3 53 66.0
QL12p034051 Quercus lobata HOM05D000329 ORTHO05D000833 2.7e-10 69.3 54 61.1
CSS0033917 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.5e-10 68.9 238 29.4
CSS0009557 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D009827 4.6e-10 68.6 50 68.0
CSS0027547 Camellia sinensis var. sinensis HOM05D007770 ORTHO05D009827 4.6e-10 68.6 50 68.0
Aqoxy1G02880 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 6.0e-10 68.2 129 34.9
CSS0026476 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 6.0e-10 68.2 50 64.0
Sopen04g013750 Solanum pennellii HOM05D000003 ORTHO05D000004 6.0e-10 68.2 54 63.0
QL08p022680 Quercus lobata HOM05D000458 ORTHO05D004796 1.0e-09 67.4 53 62.3
QL11p030734 Quercus lobata HOM05D000969 ORTHO05D000899 1.3e-09 67.0 54 59.3
QL10p002852 Quercus lobata HOM05D000003 ORTHO05D000004 1.7e-09 66.6 53 62.3
Atru.chr9.630 Acer truncatum HOM05D000003 ORTHO05D000004 2.3e-09 66.2 127 34.6
CSS0009374 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.0e-09 65.9 50 66.0
CSS0043775 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.0e-09 65.9 238 29.0
CSS0040874 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 6.6e-09 64.7 50 62.0
CSS0005407 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.5e-08 63.5 50 60.0
CSS0011681 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.5e-08 63.5 53 60.4
CSS0035103 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.9e-08 63.2 45 64.4
CSS0014021 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.5e-08 62.8 54 59.3
PSO198G0010 Papaver somniferum HOM05D000003 ORTHO05D000004 2.5e-08 62.8 143 29.4
QL02p063585 Quercus lobata HOM05D003495 ORTHO05D004159 2.5e-08 62.8 53 52.8
CSS0015726 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.3e-08 62.4 50 58.0
CSS0029653 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.3e-08 62.4 50 58.0
CSS0018102 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 4.3e-08 62.0 56 55.4
CSS0048886 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.3e-08 62.0 50 62.0
Sopen06g008270 Solanum pennellii HOM05D000003 ORTHO05D000004 4.3e-08 62.0 155 31.0
CAN.G307.24 Capsicum annuum HOM05D001607 ORTHO05D001893 5.6e-08 61.6 53 58.5
CSS0047691 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 7.3e-08 61.2 47 66.0
QL04p060538 Quercus lobata HOM05D000451 ORTHO05D000351 7.3e-08 61.2 72 44.4
CSS0020651 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 9.5e-08 60.8 50 58.0
CSS0022804 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.2e-07 60.5 50 60.0
PSO729G0214 Papaver somniferum HOM05D000003 ORTHO05D000004 1.2e-07 60.5 127 32.3
QL01p051842 Quercus lobata HOM05D001571 ORTHO05D002889 1.6e-07 60.1 53 56.6
QL06p003549 Quercus lobata HOM05D004938 ORTHO05D006035 1.6e-07 60.1 171 30.4
QL02p026579 Quercus lobata HOM05D003230 ORTHO05D003680 2.1e-07 59.7 171 30.4
CSS0006009 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.8e-07 59.3 38 76.3
Sopen11g019660 Solanum pennellii HOM05D000003 ORTHO05D000004 2.8e-07 59.3 52 57.7
Sopen12g010860 Solanum pennellii HOM05D000329 ORTHO05D005330 2.8e-07 59.3 54 51.9
TWI77G0755 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 2.8e-07 59.3 53 52.8
QL03p038358 Quercus lobata HOM05D003986 ORTHO05D004916 3.6e-07 58.9 53 54.7
Sopen09g001430 Solanum pennellii HOM05D000003 ORTHO05D000004 3.6e-07 58.9 52 55.8
CSS0001043 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.7e-07 58.5 50 54.0
SHI09342 Sapria himalayana HOM05D000003 ORTHO05D000004 4.7e-07 58.5 52 51.9
SHI09511 Sapria himalayana HOM05D000003 ORTHO05D000004 4.7e-07 58.5 52 51.9
CiPaw.03G178800 Carya illinoinensis HOM05D000003 ORTHO05D000004 6.2e-07 58.2 50 52.0
QL04p042086 Quercus lobata HOM05D000003 ORTHO05D000006 6.2e-07 58.2 92 37.0
SHI45326 Sapria himalayana HOM05D000003 ORTHO05D000004 6.2e-07 58.2 52 51.9
SHI47243 Sapria himalayana HOM05D000003 ORTHO05D000004 6.2e-07 58.2 52 51.9
CSS0041509 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 8.1e-07 57.8 73 38.4
CSS0030276 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.1e-06 57.4 50 58.0
CSS0034906 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.1e-06 57.4 47 59.6
QL05p062582 Quercus lobata HOM05D000003 ORTHO05D000004 1.1e-06 57.4 53 52.8
SHI34096 Sapria himalayana HOM05D000003 ORTHO05D000004 1.1e-06 57.4 54 50.0
QL01p030568 Quercus lobata HOM05D000003 ORTHO05D000006 1.4e-06 57.0 217 24.4
QL08p025705 Quercus lobata HOM05D000003 ORTHO05D050638 1.4e-06 57.0 53 49.1
CSS0008242 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.8e-06 56.6 76 43.4
CSS0029183 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.8e-06 56.6 47 51.1
CSS0035874 Camellia sinensis var. sinensis HOM05D006487 ORTHO05D007982 1.8e-06 56.6 50 54.0
MBI06_g15030_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 1.8e-06 56.6 150 26.0
Oeu001477.2 Olea europaea HOM05D000003 ORTHO05D000514 1.8e-06 56.6 62 45.2
PSO782G2011 Papaver somniferum HOM05D000003 ORTHO05D000004 1.8e-06 56.6 187 26.7
Sopen11g018640 Solanum pennellii HOM05D000003 ORTHO05D000004 1.8e-06 56.6 53 50.9
CSS0027194 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 2.4e-06 56.2 72 43.1
QL02p036395 Quercus lobata HOM05D000003 ORTHO05D000004 2.4e-06 56.2 218 24.8
CSS0031644 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D043290 3.1e-06 55.8 46 56.5
Aqoxy1G01793 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 4.0e-06 55.5 53 45.3
Aqoxy2G00968 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 5.2e-06 55.1 53 45.3
SHI23487 Sapria himalayana HOM05D000003 ORTHO05D000004 5.2e-06 55.1 52 50.0
Sopen06g002250 Solanum pennellii HOM05D000003 ORTHO05D000004 5.2e-06 55.1 53 49.1
Atru.chr11.644 Acer truncatum HOM05D000003 ORTHO05D000004 6.8e-06 54.7 54 48.1
Atru.chr3.1819 Acer truncatum HOM05D000003 ORTHO05D000004 6.8e-06 54.7 91 37.4
QL06p046194 Quercus lobata HOM05D004251 ORTHO05D005010 6.8e-06 54.7 50 48.0
Aqoxy2G02248 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 8.9e-06 54.3 48 47.9
CiPaw.02G164600 Carya illinoinensis HOM05D000003 ORTHO05D000004 8.9e-06 54.3 50 48.0
PSO384G3231 Papaver somniferum HOM05D000003 ORTHO05D000004 8.9e-06 54.3 111 31.5
Sopen08g016730 Solanum pennellii HOM05D000003 ORTHO05D012390 8.9e-06 54.3 52 50.0


User provided reference genes

Program Settings